Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_M08
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL161712-6|CAC70141.1| 248|Caenorhabditis elegans Hypothetical ... 224 7e-59
Z93389-9|CAB07670.2| 391|Caenorhabditis elegans Hypothetical pr... 31 0.72
U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical pr... 30 2.2
U29244-10|AAC71091.2| 908|Caenorhabditis elegans Hypothetical p... 29 3.9
Z77133-7|CAB00865.2| 735|Caenorhabditis elegans Hypothetical pr... 29 5.1
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 29 5.1
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 29 5.1
U28738-7|AAA68312.1| 341|Caenorhabditis elegans Hypothetical pr... 29 5.1
U28738-5|AAT92055.1| 342|Caenorhabditis elegans Hypothetical pr... 29 5.1
U28409-2|AAN60501.1| 288|Caenorhabditis elegans Hypothetical pr... 29 5.1
AL008868-4|CAO82021.1| 735|Caenorhabditis elegans Hypothetical ... 29 5.1
Z81449-11|CAD44106.2| 410|Caenorhabditis elegans Hypothetical p... 28 6.7
Z81449-10|CAB03766.4| 419|Caenorhabditis elegans Hypothetical p... 28 6.7
Z48241-6|CAD44100.2| 410|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z48241-5|CAA88286.4| 419|Caenorhabditis elegans Hypothetical pr... 28 6.7
AC084158-1|AAK68563.2| 1256|Caenorhabditis elegans Hypothetical ... 28 6.7
AC024806-3|AAP13749.1| 363|Caenorhabditis elegans Serpentine re... 28 8.9
>AL161712-6|CAC70141.1| 248|Caenorhabditis elegans Hypothetical
protein Y66D12A.9 protein.
Length = 248
Score = 224 bits (547), Expect = 7e-59
Identities = 100/226 (44%), Positives = 163/226 (72%), Gaps = 4/226 (1%)
Frame = +3
Query: 132 KKVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPA- 308
K++ +YK L +AE L+ + FP+K+++ + LL++ L+++ D ++ IP P A
Sbjct: 11 KELVEYKQKLFAEAERLVKEEFPKKVIEFDALLKSPKLSYDRLAEILPDKSLNIPIPDAL 70
Query: 309 ---TSNNEPNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIREL 479
T ++EP KRQR+D +G ++ +G+VPCN+ L+ L+ LV+P +R+
Sbjct: 71 NGTTDSDEPAVKRQRVDEKP-------KGAPIFAFSSGTVPCNENLAQLMDLVRPKLRDA 123
Query: 480 VEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKI 659
VE N +KMWI+ +IP+IEDGNNFGV IQE+TL+E+++VESEAA+F DQ+SRYF +R K+
Sbjct: 124 VEQCNNVKMWITLLIPRIEDGNNFGVGIQEETLSEVRNVESEAASFLDQMSRYFTTRGKL 183
Query: 660 VSKVAKYPHIDDYRRAVRELDEKEYLSLWLVMCEIRNRYCSLHDIV 797
++K+AKYPH+DDYRRA+ ++DEK+++++ LV+ E+RN + +LHD++
Sbjct: 184 ITKIAKYPHVDDYRRAILDMDEKQFINIRLVVLEMRNHFSTLHDMI 229
>Z93389-9|CAB07670.2| 391|Caenorhabditis elegans Hypothetical
protein T13F3.2 protein.
Length = 391
Score = 31.5 bits (68), Expect = 0.72
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +3
Query: 87 LNPYKVIHLIMTDVAKKVQDYKDSLKLKAEHL---IIKGFPEKIVKLNELLETSNFQNRN 257
LNP + H++ DVA+K+Q+ K S L+ ++ ++ EK++ + L + N+
Sbjct: 280 LNP--IFHILFDDVARKLQNLKPS-SLEINYMLWQLVWFVAEKVLNEDNLRHGEQYTNQL 336
Query: 258 LSDVH 272
SD+H
Sbjct: 337 ASDLH 341
>U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical
protein T20F7.5 protein.
Length = 1065
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +3
Query: 234 TSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELSSNS 374
T+N + + P+PTPP T+ +E + D + L+ NS
Sbjct: 492 TANQTGSTDGTITSGIQSPVPTPPVTNEHESQRSSRLSDFTNLAGNS 538
>U29244-10|AAC71091.2| 908|Caenorhabditis elegans Hypothetical
protein ZK1248.10 protein.
Length = 908
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 213 KLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELSSNST 377
K + L+ S+ RN S V ++ + P P PP S +P + Q L E + ++
Sbjct: 123 KSDSSLDISSLTGRNSSSVLEECSSPSPVPPPRS-PKPKKRTQFLTEEETDAETS 176
>Z77133-7|CAB00865.2| 735|Caenorhabditis elegans Hypothetical
protein K03A11.1 protein.
Length = 735
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 246 QNRNLSDVHQDLNIPIPTPPATSNNEPN 329
QN N+S+VH ++I PT NN N
Sbjct: 124 QNMNISNVHNGVHISTPTENLAENNANN 151
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 597 ESEAAAFFDQISRYFISRAKIVSKVAKYPHIDDYRRAVRELDEKEY 734
E EAA D R + + +I ++ + + RRA RE DE+++
Sbjct: 76 EEEAAKLLDYEQRRVLEKEQIEQELRELKEKQEKRRAEREEDERQF 121
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 597 ESEAAAFFDQISRYFISRAKIVSKVAKYPHIDDYRRAVRELDEKEY 734
E EAA D R + + +I ++ + + RRA RE DE+++
Sbjct: 76 EEEAAKLLDYEQRRVLEKEQIEQELRELKEKQEKRRAEREEDERQF 121
>U28738-7|AAA68312.1| 341|Caenorhabditis elegans Hypothetical
protein T28D9.3a protein.
Length = 341
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 234 TSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELSSNSTI 380
T F N + Q L +P PP T N + +R RLD+ S++S+I
Sbjct: 274 TDLFSNNSTESETQPLLLP--RPPRTPRNSEDEERHRLDAVLPSTDSSI 320
>U28738-5|AAT92055.1| 342|Caenorhabditis elegans Hypothetical
protein T28D9.3b protein.
Length = 342
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 234 TSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELSSNSTI 380
T F N + Q L +P PP T N + +R RLD+ S++S+I
Sbjct: 275 TDLFSNNSTESETQPLLLP--RPPRTPRNSEDEERHRLDAVLPSTDSSI 321
>U28409-2|AAN60501.1| 288|Caenorhabditis elegans Hypothetical
protein T25D10.5 protein.
Length = 288
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 361 NSDESSL*RLAFGSLFDV-AGGVGIGMFKS*CTSDKFRF 248
NSD+ S+ + G D GG+ + +F S TS+K+RF
Sbjct: 9 NSDKYSI-KSVLGKFCDTNCGGINVSLFVSETTSNKYRF 46
>AL008868-4|CAO82021.1| 735|Caenorhabditis elegans Hypothetical
protein K03A11.1 protein.
Length = 735
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 246 QNRNLSDVHQDLNIPIPTPPATSNNEPN 329
QN N+S+VH ++I PT NN N
Sbjct: 124 QNMNISNVHNGVHISTPTENLAENNANN 151
>Z81449-11|CAD44106.2| 410|Caenorhabditis elegans Hypothetical
protein C32A3.3b protein.
Length = 410
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +3
Query: 132 KKVQDYKDSLKLKAE-HLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPA 308
+K Q + LK + E + K + + I L +++++ +NRNLS L +P +
Sbjct: 75 EKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQMVKSLVNENRNLSTTVSSLPNHADSPVS 134
Query: 309 TSNNEPNAKRQRLDSSELSSNSTIE 383
TS E + K L+ E+SS E
Sbjct: 135 TSMREADLK-MLLELKEMSSQQKDE 158
>Z81449-10|CAB03766.4| 419|Caenorhabditis elegans Hypothetical
protein C32A3.3a protein.
Length = 419
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +3
Query: 132 KKVQDYKDSLKLKAE-HLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPA 308
+K Q + LK + E + K + + I L +++++ +NRNLS L +P +
Sbjct: 84 EKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQMVKSLVNENRNLSTTVSSLPNHADSPVS 143
Query: 309 TSNNEPNAKRQRLDSSELSSNSTIE 383
TS E + K L+ E+SS E
Sbjct: 144 TSMREADLK-MLLELKEMSSQQKDE 167
>Z48241-6|CAD44100.2| 410|Caenorhabditis elegans Hypothetical
protein C32A3.3b protein.
Length = 410
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +3
Query: 132 KKVQDYKDSLKLKAE-HLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPA 308
+K Q + LK + E + K + + I L +++++ +NRNLS L +P +
Sbjct: 75 EKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQMVKSLVNENRNLSTTVSSLPNHADSPVS 134
Query: 309 TSNNEPNAKRQRLDSSELSSNSTIE 383
TS E + K L+ E+SS E
Sbjct: 135 TSMREADLK-MLLELKEMSSQQKDE 158
>Z48241-5|CAA88286.4| 419|Caenorhabditis elegans Hypothetical
protein C32A3.3a protein.
Length = 419
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +3
Query: 132 KKVQDYKDSLKLKAE-HLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPA 308
+K Q + LK + E + K + + I L +++++ +NRNLS L +P +
Sbjct: 84 EKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQMVKSLVNENRNLSTTVSSLPNHADSPVS 143
Query: 309 TSNNEPNAKRQRLDSSELSSNSTIE 383
TS E + K L+ E+SS E
Sbjct: 144 TSMREADLK-MLLELKEMSSQQKDE 167
>AC084158-1|AAK68563.2| 1256|Caenorhabditis elegans Hypothetical
protein Y69A2AR.19 protein.
Length = 1256
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 523 IINEIHILSKFESSTSSLMCGLTRCIRSL 437
++NEI +LS + SS+M L +C R+L
Sbjct: 421 LVNEISLLSSDSAEMSSVMAELDKCSRTL 449
>AC024806-3|AAP13749.1| 363|Caenorhabditis elegans Serpentine
receptor, class w protein40 protein.
Length = 363
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 427 TSHSVILYILLSHTLGNLLKIQTY 498
TSHS++L +LS ++ NLLKI +
Sbjct: 112 TSHSMLLLAVLSSSIRNLLKISMW 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,368,815
Number of Sequences: 27780
Number of extensions: 359328
Number of successful extensions: 1128
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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