Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_M07
(767 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_39497| Best HMM Match : zf-C3HC4 (HMM E-Value=5.1e-12) 53 3e-07
SB_24514| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_23934| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07) 47 1e-05
SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18) 45 6e-05
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) 43 2e-04
SB_698| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00037) 41 0.001
SB_39493| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-09) 41 0.001
SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08) 40 0.002
SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_39560| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00055) 39 0.004
SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 39 0.005
SB_32416| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0021) 37 0.016
SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_23054| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11) 36 0.036
SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.048
SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 36 0.048
SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 36 0.048
SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 35 0.063
SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09) 35 0.063
SB_8003| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.083
SB_15491| Best HMM Match : zf-C3HC4 (HMM E-Value=0.079) 35 0.083
SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10) 34 0.11
SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07) 34 0.11
SB_51714| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_19621| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_42817| Best HMM Match : zf-C3HC4 (HMM E-Value=0.12) 33 0.19
SB_39590| Best HMM Match : PHD (HMM E-Value=2.2e-18) 33 0.25
SB_31116| Best HMM Match : zf-C3HC4 (HMM E-Value=5.6e-10) 33 0.25
SB_58672| Best HMM Match : PHD (HMM E-Value=3e-18) 33 0.25
SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 33 0.25
SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 33 0.25
SB_23154| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.34
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44
SB_57032| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.59
SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23) 32 0.59
SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034) 31 0.77
SB_4080| Best HMM Match : zf-C3HC4 (HMM E-Value=0.23) 31 0.77
SB_20928| Best HMM Match : NHL (HMM E-Value=0) 31 1.4
SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21) 31 1.4
SB_31352| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12) 31 1.4
SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23) 31 1.4
SB_2427| Best HMM Match : zf-C3HC4 (HMM E-Value=0.3) 30 1.8
SB_11042| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00013) 30 1.8
SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_49766| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00033) 30 2.4
SB_6860| Best HMM Match : zf-C3HC4 (HMM E-Value=0.14) 30 2.4
SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12) 29 3.1
SB_11518| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_13966| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08) 29 4.1
SB_3579| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_47634| Best HMM Match : Metallophos (HMM E-Value=1e-11) 29 5.5
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_41628| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_54069| Best HMM Match : zf-C3HC4 (HMM E-Value=0.91) 28 9.5
SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_31765| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_7109| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0029) 28 9.5
SB_33822| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0022) 28 9.5
SB_4061| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 54.4 bits (125), Expect = 1e-07
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +1
Query: 289 DEHFRKRSWSLEECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCRKD 459
D+H ++ S S C IC K + +PC H FH CI+PWL++ +CP CR +
Sbjct: 51 DKHLKELSTS--SCPICLGDYEKGESTKQMPCDHLFHPGCILPWLEKTNSCPVCRHE 105
>SB_39497| Best HMM Match : zf-C3HC4 (HMM E-Value=5.1e-12)
Length = 558
Score = 52.8 bits (121), Expect = 3e-07
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +1
Query: 325 ECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNC 450
+C IC E Q+L +PC H FH +C+ PWL TCP C
Sbjct: 213 KCVICLEGFKNGQDLRIVPCRHEFHKECVDPWLLSNFTCPLC 254
>SB_24514| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 52.0 bits (119), Expect = 5e-07
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +1
Query: 328 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQE-KQTCPNCRK 456
C+IC + + +L LPC H +H +C+ PWL E K+TCP C++
Sbjct: 301 CAICLDEYKEGDKLRILPCDHAYHCKCVDPWLTEGKRTCPVCKR 344
>SB_23934| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)
Length = 617
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Frame = +1
Query: 310 SWSLE--ECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQT-----CPNCR 453
SW + EC IC + L+ LPC H+FH CI WL T CPNCR
Sbjct: 552 SWMIPCGECVICLDEFKPGCTLLGLPCGHSFHQHCIEVWLAGDNTAPHHCCPNCR 606
>SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18)
Length = 398
Score = 45.2 bits (102), Expect = 6e-05
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 304 KRSWSLEECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCRK 456
K+ + + C IC E + L C H + C+ WL+ TCP CRK
Sbjct: 254 KKRYESKSCPICLEEFTPETPTRLLVCGHKYCEPCLSRWLENNTTCPICRK 304
>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
Length = 553
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +1
Query: 328 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCRKDA*SKVIKEV 486
C +C E+ ++ L C+H+F C+ WL+++ TCP CR S+ ++ +
Sbjct: 371 CIVCQELFIR---ATTLTCSHSFCEYCLQSWLRKRNTCPICRCAVQSQPVRSI 420
>SB_698| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00037)
Length = 303
Score = 41.1 bits (92), Expect = 0.001
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +1
Query: 328 CSICFEIMLKDQELMALPCTHNFHSQCIMPWL 423
C IC E + LPC HNFHS CI WL
Sbjct: 257 CLICMEEYAVGDSMKYLPCRHNFHSACIRTWL 288
>SB_39493| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-09)
Length = 310
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +1
Query: 328 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCRK 456
C IC +++ ++ LMA PC H++ S C++ WL TCP R+
Sbjct: 18 CCICRDVL--EEPLMA-PCEHSYCSACVLGWLTHYNTCPEDRQ 57
>SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08)
Length = 688
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Frame = +1
Query: 319 LEECSICF-----EIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCR 453
L C +CF ++ L Q +M C H F CI W +QTCP CR
Sbjct: 474 LRTCKVCFVMPTCQVKLAKQ-IMLRTCKHIFCEDCISLWFDREQTCPMCR 522
>SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 325 ECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCP 444
+C ICF ++ ++ + C H F SQC++ W+ E TCP
Sbjct: 56 KCGICFGVL---EDPLVTTCGHVFCSQCLVHWIAENGTCP 92
>SB_39560| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00055)
Length = 545
Score = 39.1 bits (87), Expect = 0.004
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 328 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQ 426
C +C ++L LPC H+FHS+CI WL+
Sbjct: 361 CVVCMMDYTNREKLRKLPCNHDFHSKCIDRWLK 393
>SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +1
Query: 328 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQE---KQTCPNCRKDA*SKVIKEVK 489
C+IC E++ + +A PC H F CI WL + K CP C+ S V+ +++
Sbjct: 160 CAICKEVLTQP---IATPCDHYFCVLCICEWLDQTYNKSGCPVCKASISSNVLHKIQ 213
>SB_32416| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0021)
Length = 358
Score = 37.1 bits (82), Expect = 0.016
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +1
Query: 259 AEDSQINRLRDEHFRKRSWSLEECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEK 432
AE Q+ R K+ C +C + Q + LPC H +H++CI WL+ +
Sbjct: 270 AEIDQLPTYRVTAESKKQNDDARCVVCLVDFEEKQLVRTLPCLHEYHTRCIDKWLKNR 327
>SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1022
Score = 37.1 bits (82), Expect = 0.016
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +1
Query: 280 RLRDEHFRKRSWSLEECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQ---TCPNC 450
+ RDE W ++ +IC + PC H+F +C+ + E+Q CP+C
Sbjct: 386 KCRDERHGTTFWCIKMSTICGVCRETYTDPRVAPCLHSFCKECVTKLVTERQGKFVCPDC 445
Query: 451 RKD 459
+ D
Sbjct: 446 QAD 448
>SB_23054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 36.3 bits (80), Expect = 0.027
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +1
Query: 328 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCP 444
C +C Q + L C H FH CI WL + CP
Sbjct: 212 CGVCLSAYHPLQYVRKLQCRHVFHRDCIDSWLATQSICP 250
>SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11)
Length = 471
Score = 35.9 bits (79), Expect = 0.036
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 325 ECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCRKDA*SKVIKEVKSA 495
EC +CF ++L E + C H+F C+ L + CP CR +K++ E + A
Sbjct: 329 ECKLCFNLLL---EPVTSLCGHSFCRDCLYRSLDHRVECPCCRAPL-TKILAERRQA 381
>SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 35.5 bits (78), Expect = 0.048
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +1
Query: 328 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQE---KQTCPNCR 453
C+IC E++ + +A PC H F CI WL + K CP C+
Sbjct: 160 CAICKEVLTQP---IATPCDHYFCVLCICEWLDQTYNKSGCPVCK 201
>SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 262
Score = 35.5 bits (78), Expect = 0.048
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +1
Query: 328 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQE---KQTCPNCR 453
C+IC E++ + +A PC H F CI WL + K CP C+
Sbjct: 34 CAICKEVLTQP---IATPCDHYFCVLCICEWLDQTYNKSGCPVCK 75
>SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 35.5 bits (78), Expect = 0.048
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +1
Query: 328 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQE---KQTCPNCR 453
C+IC E++ + +A PC H F CI WL + K CP C+
Sbjct: 160 CAICKEVLTQP---IATPCDHYFCVLCICEWLDQTYNKSGCPVCK 201
>SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 346
Score = 35.1 bits (77), Expect = 0.063
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 328 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQ--EKQTCPNCR 453
C+IC ++ + + C H+F C+ WL E Q+CP+CR
Sbjct: 18 CNICVGVL---ENAITTICGHSFCESCLETWLSRPEVQSCPSCR 58
>SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09)
Length = 2059
Score = 35.1 bits (77), Expect = 0.063
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 280 RLRDEHFRKRSWSLEECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQE-KQTCPNCR 453
RL+ +H + + +EC IC E +++A C+H H C + ++ + CP CR
Sbjct: 1969 RLQGKHKCRENSGHDECCICLEDAFTGCQVLA--CSHKVHRDCAVAMVRNGVRNCPICR 2025
>SB_8003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 34.7 bits (76), Expect = 0.083
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
Frame = +1
Query: 328 CSICFEIMLKDQELMALPCTHNFHSQCIMPW------LQEKQTCPNCRKD 459
C ICF ++ CT HS+C+ W ++QTCP CR D
Sbjct: 5 CCICFSE--ENLNTSTFCCTQKIHSECLTQWNNAQAANNQQQTCPFCRSD 52
>SB_15491| Best HMM Match : zf-C3HC4 (HMM E-Value=0.079)
Length = 689
Score = 34.7 bits (76), Expect = 0.083
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Frame = +1
Query: 328 CSICFEIMLKDQELMALPCTHN-FHSQCIMPW----LQEKQTCPNCRK 456
C IC E D EL LPC H C+ W L + TCP+CRK
Sbjct: 184 CIICCE---GDDELELLPCCKQPCHYPCLWKWVHAHLTPRSTCPHCRK 228
>SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10)
Length = 337
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 328 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQ-TCPNCR 453
C IC ++++ E + LPC H F C +QE CP CR
Sbjct: 37 CPICLQLLV---EPVVLPCEHEFCKMCFTQNVQEANLQCPMCR 76
>SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)
Length = 306
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
Frame = +1
Query: 328 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEK--------QTCPNCRKD 459
C IC E++ + + PC H+F C+ W+ K +CP+CR D
Sbjct: 18 CGICAEVL---ERAVLTPCGHSFCGVCLETWMNAKLEENEKCPASCPSCRAD 66
>SB_51714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Frame = +1
Query: 328 CSICFEIMLKDQELMAL-PCTHN-FHSQCIMPW----LQEKQTCPNCRKD 459
C IC E D ELM L PC H C+ W L + TCP+CRK+
Sbjct: 7 CIICCE---GDDELMELLPCCKQPCHHPCMWKWIHAHLTPRSTCPHCRKE 53
>SB_19621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 6/32 (18%)
Frame = +1
Query: 376 LPCTHNFHSQCIMPWLQE------KQTCPNCR 453
LPC H++ ++CI PW++ TCP CR
Sbjct: 289 LPCLHHYCAKCIDPWIKTCSDQGINSTCPECR 320
>SB_42817| Best HMM Match : zf-C3HC4 (HMM E-Value=0.12)
Length = 539
Score = 33.5 bits (73), Expect = 0.19
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Frame = +1
Query: 328 CSICFEIMLKDQELMAL-PCTHN-FHSQCIMPW----LQEKQTCPNCRK 456
C IC E D ELM L PC H C+ W L + TCP+CRK
Sbjct: 11 CIICCE---GDDELMQLLPCCKQPCHHPCLWKWVHAHLTPRSTCPHCRK 56
>SB_39590| Best HMM Match : PHD (HMM E-Value=2.2e-18)
Length = 1284
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 283 LRDEHFRKRSWSLEECSICFEIMLKDQELMALPCTHNFHSQCIMP 417
L +E + SW + CS C +D+ LM C +H C+ P
Sbjct: 848 LDEEPIDEDSWCCDSCSTCVVCGQQDKLLMCDKCQRGYHVDCLGP 892
>SB_31116| Best HMM Match : zf-C3HC4 (HMM E-Value=5.6e-10)
Length = 169
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 328 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQ--EKQTCPNC 450
C +C ++K + C H F CI+ +LQ E TCP+C
Sbjct: 64 CGLCEGYLIKPTTITE--CLHTFCKSCIVTYLQDSEDNTCPSC 104
>SB_58672| Best HMM Match : PHD (HMM E-Value=3e-18)
Length = 458
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 283 LRDEHFRKRSWSLEECSICFEIMLKDQELMALPCTHNFHSQCIMP 417
L +E + SW + CS C +D+ LM C +H C+ P
Sbjct: 189 LDEEPIDEDSWCCDSCSTCVVCGQQDKLLMCDKCQRGYHVDCLGP 233
>SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 858
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 325 ECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCR 453
EC IC E + + L C H F CI + + CP CR
Sbjct: 677 ECPICLETITYPETLQG--CGHTFCRPCITEASKSSKLCPTCR 717
>SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 911
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 325 ECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCR 453
EC IC E + + L C H F CI + + CP CR
Sbjct: 752 ECPICLETITYPETLQG--CGHTFCRPCITEASKSSKLCPTCR 792
>SB_23154| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 32.7 bits (71), Expect = 0.34
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Frame = +1
Query: 328 CSICFEIMLKDQELMAL-PCTHN-FHSQCIMPW----LQEKQTCPNCRK 456
C IC E D ELM L PC H C+ W L + TCP+CRK
Sbjct: 11 CIICCE---GDDELMELLPCCKQPCHFPCLWKWIHAHLTPRATCPHCRK 56
>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1716
Score = 32.3 bits (70), Expect = 0.44
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 382 CTHNFHSQCIMPWLQEKQTCPNC 450
C H+F CI+ WLQ CP C
Sbjct: 1382 CLHSFCRSCIVSWLQASYHCPVC 1404
>SB_57032| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 446
Score = 31.9 bits (69), Expect = 0.59
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Frame = +1
Query: 328 CSICFEIMLKDQELMAL-PCTHN-FHSQCIMPW----LQEKQTCPNCRK 456
C IC E D ELM L PC H C+ W L + TCP+CRK
Sbjct: 11 CIICCE---GDDELMELHPCCKQPCHYICLWKWIHAHLTPRATCPHCRK 56
>SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23)
Length = 581
Score = 31.9 bits (69), Expect = 0.59
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +1
Query: 328 CSICFEIMLKDQELMALPCTHNFHSQC---IMPWLQEKQTCPNCRKD 459
C +C E+ + LPC H F +C ++P +CP+CR D
Sbjct: 145 CPLCHEMFANPR---LLPCLHTFCKRCLENLVPPRSHTLSCPSCRLD 188
>SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034)
Length = 671
Score = 31.5 bits (68), Expect = 0.77
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 355 KDQELMALPCTHNFHSQCIMPWLQEKQTCPNCR 453
K +E + P H F S C+ WL+ + CP CR
Sbjct: 109 KVKEPVVCPNQHVFCSPCLDLWLRTNRYCPTCR 141
>SB_4080| Best HMM Match : zf-C3HC4 (HMM E-Value=0.23)
Length = 203
Score = 31.5 bits (68), Expect = 0.77
Identities = 11/41 (26%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = +1
Query: 337 CFEI---MLKDQELMAL-PCTHNFHSQCIMPWLQEKQTCPN 447
C+++ ++ D ++L PC H+F + C W++ + CP+
Sbjct: 62 CYDVNVTLMSDSFSISLQPCMHSFCASCYSQWMEHSRDCPS 102
>SB_20928| Best HMM Match : NHL (HMM E-Value=0)
Length = 795
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Frame = +1
Query: 334 ICFEIMLKDQELMALPCTHNFHSQCIMPWLQE------KQTCPNCRKD 459
+C + M + LPC H F SQC+ L TCP C +D
Sbjct: 14 VCPKCMNAYENPKVLPCLHTFCSQCLSEELHRDCEGRLNVTCPKCLRD 61
>SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Frame = +1
Query: 325 ECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQT-----CPNCR 453
EC IC E KD + LPC H F +C++ +T CP C+
Sbjct: 15 ECPICLE-RFKDPRV--LPCLHTFCYECLVGLASRYKTEGKWPCPQCK 59
>SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21)
Length = 645
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 328 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQE---KQTCPNCR 453
CS+C E + +E LPC H F +C+ Q CP CR
Sbjct: 22 CSVCLE---QFREPKMLPCFHTFCKECLEKTKQSFRGNLLCPTCR 63
>SB_31352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/63 (28%), Positives = 25/63 (39%)
Frame = +1
Query: 265 DSQINRLRDEHFRKRSWSLEECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCP 444
D I +L E +K W L++ IC M + PC H C + + CP
Sbjct: 328 DGDIEKLSPEELKKMVWHLQDARICQICMDVEVATAFCPCG---HVVCCVECSALCKECP 384
Query: 445 NCR 453
CR
Sbjct: 385 LCR 387
>SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12)
Length = 203
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Frame = +1
Query: 325 ECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQT-----CPNCR 453
EC IC E KD + LPC H F +C++ +T CP C+
Sbjct: 15 ECPICLE-RFKDPRV--LPCLHTFCYECLVGLASRYKTEGKWPCPQCK 59
>SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23)
Length = 877
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Frame = +1
Query: 328 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQT----CPNCRKD 459
C IC +L+D + LPC H + +CI + +Q+ CP+C ++
Sbjct: 145 CGIC-HALLRDARV--LPCLHTYCRRCIEDIILHRQSVRAHCPSCNRE 189
>SB_2427| Best HMM Match : zf-C3HC4 (HMM E-Value=0.3)
Length = 378
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
Frame = +1
Query: 367 LMALPCT-HNFHSQCIMPWLQ----EKQTCPNCR 453
L LPC + H QC W+ E+ TCP+CR
Sbjct: 46 LSRLPCCGQSCHQQCFWKWIHTHRTERITCPHCR 79
>SB_11042| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00013)
Length = 499
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/93 (25%), Positives = 37/93 (39%)
Frame = +1
Query: 175 YFLSKRPEQPDTEGSTSSAWAYNDHSALAEDSQINRLRDEHFRKRSWSLEECSICFEIML 354
+F K +Q + EG+ + D +++R EH S+ CSIC +
Sbjct: 290 HFRRKLYQQEEEEGARTV-----DSEIEVTSFKLDRCEPEHLV----SILVCSICMGV-- 338
Query: 355 KDQELMALPCTHNFHSQCIMPWLQEKQTCPNCR 453
+ C F S CI WL+ C +CR
Sbjct: 339 -PSTPVVTQCDQIFCSGCITAWLRNAGACSSCR 370
>SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +1
Query: 328 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQ----EKQTCPNCR 453
C +C + +D+ L+ C +H +C+ L+ E+ CP CR
Sbjct: 153 CEVCHDCDREDRLLLCDDCDKGYHMECLTSPLEFVPIEEWFCPICR 198
>SB_49766| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00033)
Length = 630
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/78 (30%), Positives = 28/78 (35%)
Frame = +1
Query: 82 VREEDRQKTGCTGRGLGIXXXXXXXXXXXLYYFLSKRPEQPDTEGSTSSAWAYNDHSALA 261
VR D +K +G+G G L YFL QP E S DHSA+
Sbjct: 437 VRHPDSKKFTWSGKGQGKASRKKESIFRRLLYFLISHCLQPYVEKSEIIPVPATDHSAIT 496
Query: 262 EDSQINRLRDEHFRKRSW 315
IN L E W
Sbjct: 497 --LSINSLPGEKHGPSFW 512
>SB_6860| Best HMM Match : zf-C3HC4 (HMM E-Value=0.14)
Length = 129
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 8/52 (15%)
Frame = +1
Query: 325 ECSICFEIMLKDQELMALP--CTHNFHSQCIMPWLQEKQ------TCPNCRK 456
EC IC E +++E+M C H +C+ W + ++ TCP+CRK
Sbjct: 2 ECLICKE---EEEEVMETINCCKQPMHHRCLNDWYKVQEYRGLLPTCPHCRK 50
>SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)
Length = 654
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +1
Query: 325 ECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCR 453
EC++C + + PC H F C+ L + CP CR
Sbjct: 378 ECTLCCRLFYNP---VTTPCGHVFCRACLNRSLDHRPGCPICR 417
>SB_11518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1144
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = -3
Query: 516 KKNIDPVSAFYFLYHLRSGVLPAIGARLFLLKPGHDALRVKIVGAR*GHQLLILQHDLEA 337
K+ ++ ++ L + P +G+ LL PG + RVKIVG + G ++ ++A
Sbjct: 514 KRELEQINKELKAIPLTEQLFPQVGSLACLLLPGGERARVKIVGLQGGFHNGMMFPVIQA 573
Query: 336 D 334
D
Sbjct: 574 D 574
>SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +1
Query: 328 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQ---TCPNCRKDA 462
CS+C + ++ +L LPC H+F C+ + E CP C +A
Sbjct: 20 CSLCHRL-IRGPKL--LPCLHSFCLACLEDLVTENDVGFNCPQCHTEA 64
>SB_13966| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +1
Query: 325 ECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNC 450
+C++C + D + C H+FH C + + CP C
Sbjct: 73 KCNLCSRPL--DLPAVHFLCLHSFHQPCFEGYAENDNECPIC 112
>SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08)
Length = 599
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = -3
Query: 435 LFLLKPGHDALRVKIVGAR*GHQLLILQHDLEADGAFFQRPRALTEVLIPEPIY 274
L LLK GH A RVK++ A G +L + E + Q + + L+PEP Y
Sbjct: 496 LLLLKKGHVAWRVKLLRASSGSELGVDHKSSEGQQIWGQ---SCFKKLLPEPNY 546
>SB_3579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 8/76 (10%)
Frame = +1
Query: 259 AEDSQINRLRDEHFRKRSWSLEECS----ICFEIMLKDQELMALPCTHNFHSQCIMPWLQ 426
A++ + NRLR F +E C E + LM CT +H C+ P L
Sbjct: 157 ADNGRANRLRYRRFVTPESPADEDDDHEDACSECKASGELLMCDTCTLVYHLSCLDPPLT 216
Query: 427 EKQT----CPNCRKDA 462
T CP C++ A
Sbjct: 217 TIPTGMWICPKCKETA 232
>SB_47634| Best HMM Match : Metallophos (HMM E-Value=1e-11)
Length = 585
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 333 HLLRDHAEGSGADGPTVHPQFSLAVHHALASGETDVP 443
H+ + SGA G HP F+ ++ H + GE VP
Sbjct: 362 HVSGGEKDPSGAPGEGFHPWFAPSLFHTDSGGECGVP 398
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Frame = +1
Query: 382 CTHNFHSQCIMPWL----QEKQTCPNCRK 456
C NFH +C+ P L + TCP C+K
Sbjct: 1212 CPRNFHLKCLEPPLVKMPRVSWTCPKCKK 1240
>SB_41628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 690
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +1
Query: 307 RSWSL--EECSICFEIMLKDQELMALPCTHNFHSQC 408
R W + +EC ICF +++ + C H+F ++C
Sbjct: 303 RDWFMVSKECGICFGDFRENKMTALMSCGHSFCTEC 338
>SB_54069| Best HMM Match : zf-C3HC4 (HMM E-Value=0.91)
Length = 355
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +1
Query: 358 DQELMALPCTHNFHSQCIMPWLQEKQTCPNCRKDA*SKV 474
D E++ L C + FH C+ Q CP C KV
Sbjct: 112 DTEILRLTCGYTFHDVCLQ---TNDQLCPFCTTSILEKV 147
>SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1442
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/43 (20%), Positives = 23/43 (53%)
Frame = +1
Query: 301 RKRSWSLEECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQE 429
R + + EC +C ++ +++ + L C F S C+ ++++
Sbjct: 996 RSKKFLQRECIVCMDLKPENRMITMLNCQCRFCSDCVSQYVKQ 1038
>SB_31765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 328 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCR 453
C IC E++ K E + THN C+ L +CP C+
Sbjct: 112 CPICSELLDKPVETIF---THNACGACLTQALAVNSSCPVCK 150
>SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 887
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 274 INRLRDEHFRKRSWSLEECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQ---TCP 444
+NR++D H+R C IC E + LPC H+F C+ ++ ++ CP
Sbjct: 6 VNRIQD-HYRL------VCGICQETYNNPK---VLPCLHSFCQNCLDKSIRSQERVLVCP 55
Query: 445 NCR 453
C+
Sbjct: 56 TCQ 58
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 380 RAPTIFTRSASCPGFRRNRRAPIAGRTPDRR 472
R+P++ RS S G R RR+P R+P+RR
Sbjct: 131 RSPSLERRSRSRSGSRERRRSP--SRSPERR 159
>SB_7109| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0029)
Length = 232
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 328 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCR 453
C IC E++ K E + THN C+ L +CP C+
Sbjct: 86 CPICCELLDKPVETIF---THNACGACLTQALAVNSSCPVCK 124
>SB_33822| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0022)
Length = 229
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 328 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCR 453
C IC E++ K E + THN C+ L +CP C+
Sbjct: 133 CPICSELLDKPVETIF---THNACGACLTQALAVNSSCPVCK 171
>SB_4061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +2
Query: 284 SGMSTSVSARGRWKNAPXXXXXXXXXXXXWPY-RAPTIFTRSASCPGFRRNRRAPIAGRT 460
+ + T ++A G W P Y RAPTI +SA + R+R + R
Sbjct: 14 ASIETCINATGLWHVCPAGEHFGKGDREVCVYARAPTINHKSADSDPYSRDREVCMYARA 73
Query: 461 P 463
P
Sbjct: 74 P 74
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,288,560
Number of Sequences: 59808
Number of extensions: 385019
Number of successful extensions: 883
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2083999566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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