Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_M06
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   5.4  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   7.1  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   9.4  

>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 438 AEVTKDCMDPEDDDGMIPYAAFLKKVMAXKTSQLVISL 551
           A+ T +C DPED  G   Y   L  + + + S+L+  L
Sbjct: 205 ADGTGNCEDPEDVPGCEDYYGDL-DLKSIRKSELLAGL 241


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 166 PWRSPESAQLKPHTGNH 216
           PW +    Q+K  +GNH
Sbjct: 141 PWFAEHMGQIKVASGNH 157


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 438 AEVTKDCMDPEDDDGMIPY 494
           A+ T +C DPED  G   Y
Sbjct: 205 ADGTGNCEDPEDVPGCEDY 223


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,733
Number of Sequences: 336
Number of extensions: 2326
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)