Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_M06
(683 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 63 2e-10
SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15) 59 3e-09
SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08) 56 3e-08
SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) 50 2e-06
SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) 50 2e-06
SB_45638| Best HMM Match : efhand (HMM E-Value=0.00028) 47 1e-05
SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29) 46 4e-05
SB_16922| Best HMM Match : DUF1647 (HMM E-Value=2e-07) 44 9e-05
SB_10943| Best HMM Match : efhand (HMM E-Value=6.4e-07) 44 9e-05
SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05) 35 0.071
SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16) 34 0.093
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26) 33 0.28
SB_42726| Best HMM Match : efhand (HMM E-Value=6.4e-07) 32 0.50
SB_15743| Best HMM Match : efhand (HMM E-Value=3.6e-07) 32 0.50
SB_29567| Best HMM Match : Polysacc_deac_1 (HMM E-Value=7.7) 31 1.1
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 31 1.1
SB_6450| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_43494| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_43877| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_14506| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_23229| Best HMM Match : efhand (HMM E-Value=6.8e-25) 29 4.6
SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) 29 4.6
SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23) 29 4.6
SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24) 29 4.6
SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94) 28 6.1
SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026) 28 6.1
SB_36972| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_1431| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_57512| Best HMM Match : DUF573 (HMM E-Value=4.7) 28 8.1
SB_47769| Best HMM Match : zf-CCHC (HMM E-Value=0.00034) 28 8.1
SB_41482| Best HMM Match : Retrotrans_gag (HMM E-Value=0.21) 28 8.1
SB_15829| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 28 8.1
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 28 8.1
SB_50098| Best HMM Match : DUF573 (HMM E-Value=4.7) 28 8.1
SB_47793| Best HMM Match : Retrotrans_gag (HMM E-Value=0.21) 28 8.1
SB_45402| Best HMM Match : zf-CCHC (HMM E-Value=0.00034) 28 8.1
SB_44931| Best HMM Match : zf-CCHC (HMM E-Value=0.00034) 28 8.1
SB_35785| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_35576| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_866| Best HMM Match : efhand (HMM E-Value=7.4e-18) 28 8.1
SB_489| Best HMM Match : zf-CCHC (HMM E-Value=0.00034) 28 8.1
>SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)
Length = 646
Score = 62.9 bits (146), Expect = 2e-10
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Frame = +2
Query: 116 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXX-XXXXXXXXXXFLPIYSQ 292
AFS++D G GKI+ +G LLR+L NPT A + FLPIY+
Sbjct: 519 AFSLFDRVGDGKIECDQIGCLLRSLGLNPTGAEVKKIEKDVDPKGIARVSFEEFLPIYTS 578
Query: 293 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAEL 391
A + K G+ ++F+E L+++D++ G +L AEL
Sbjct: 579 AYQKKQTGSADEFVEGLRVFDRDGTGTVLAAEL 611
>SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15)
Length = 150
Score = 59.3 bits (137), Expect = 3e-09
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Frame = +2
Query: 83 LSKHXVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXX-XXXXXX 259
L+ + + +F +YD +G KID+ LG++LR L NPT A +
Sbjct: 5 LTDKDIRQLRESFELYDKQGDEKIDSSQLGEVLRGLGQNPTNAEVKKIVSEMDPEGGNRI 64
Query: 260 XXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHASCT 409
FLP+Y K + + EDF++ L+++D + +G++ EL H T
Sbjct: 65 SFEEFLPVYQSYMGKKPKFSTEDFVDSLRVFDNDGSGMINEGELRHILTT 114
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 393 HTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVM 518
H L LGEKL DSEV + + ED G I F+ V+
Sbjct: 110 HILTTLGEKLTDSEVDSLIQGL---EDKQGQIDCEEFILSVL 148
>SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08)
Length = 144
Score = 56.0 bits (129), Expect = 3e-08
Identities = 36/106 (33%), Positives = 51/106 (48%)
Frame = +2
Query: 74 MSXLSKHXVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXX 253
M L+ + AFS++D GKG IDA + D+LRA+ NP + I
Sbjct: 1 MVDLNDEQIGELKDAFSLFDKTGKGYIDADIVIDVLRAVGLNPQIDDI--KKTEKELGTK 58
Query: 254 XXXXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAEL 391
FL +Y K K QG E+F+E L+ +D N +G M A+L
Sbjct: 59 PVSFDSFLSLYVSYSK-KPQGGMEEFIEGLRAFDNNSDGTMSSAQL 103
>SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 52.8 bits (121), Expect = 2e-07
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Frame = +2
Query: 83 LSKHXVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXX 262
L++ + AFS++D +G G I LG ++R+L NPT A +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 263 XX-XFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTH 397
FL + A+K KD + E+ E +++DK+ NG + AEL H
Sbjct: 65 DFPEFLTM--MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRH 108
>SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 659
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +2
Query: 116 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXX-XFLPIYSQ 292
AFS++D +G G I LG ++R+L NPT A + FL +
Sbjct: 5 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--M 62
Query: 293 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTH 397
A+K K+ + E+ E +++DK+ NG + AEL H
Sbjct: 63 ARKMKNTDSEEEIREAFRVFDKDGNGFISAAELRH 97
>SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 250
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +2
Query: 116 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXX-XFLPIYSQ 292
AFS++D +G G I LG ++R+L NPT A + FL +
Sbjct: 5 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--M 62
Query: 293 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTH 397
A+K K+ + E+ E +++DK+ NG + AEL H
Sbjct: 63 ARKMKNTDSEEEIREAFRVFDKDGNGFISAAELRH 97
>SB_45638| Best HMM Match : efhand (HMM E-Value=0.00028)
Length = 146
Score = 47.2 bits (107), Expect = 1e-05
Identities = 30/98 (30%), Positives = 44/98 (44%)
Frame = +2
Query: 119 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXXFLPIYSQAK 298
F ++D G G I+ +G +LRA+ NP + +LPIY++
Sbjct: 15 FMLFDQIGDGNINYDQIGKMLRAMGLNPIDGEVKKVEADFKTKERVSFEE-WLPIYTEFS 73
Query: 299 KDKDQGAYEDFLECLKLYDKNENGLMLGAELTHASCTR 412
K K A EDFLE LK++D+ NG + C R
Sbjct: 74 KKKPP-AKEDFLEGLKVFDREANGKIDSGTFRGLLCNR 110
>SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29)
Length = 420
Score = 45.6 bits (103), Expect = 4e-05
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Frame = +2
Query: 83 LSKHXVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXX 262
LS+ V AF+++D +G G I + L ++R+L NPT +
Sbjct: 284 LSEEQVAELKEAFALFDKDGGGSISSSELAHVMRSLGQNPTEQELKDMIAEVDQDDNGEI 343
Query: 263 XX-XFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAEL 391
FL + AKK K+ E+ + K++DKN +G++ +EL
Sbjct: 344 DFPEFLQMV--AKKIKETDTEEEIQDAFKVFDKNGDGMISSSEL 385
>SB_16922| Best HMM Match : DUF1647 (HMM E-Value=2e-07)
Length = 422
Score = 44.4 bits (100), Expect = 9e-05
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Frame = +2
Query: 119 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXXFLPIYSQAK 298
F +YD G KID LG +LRA NPT + + FLPIY
Sbjct: 286 FDLYDTTGSEKIDVGYLGQVLRAAGLNPTQSEV--RKVERDFGKSAMAFDEFLPIYHSVT 343
Query: 299 K----DKDQGAYEDFLECLKLYDKNENGLMLGAELTH 397
+ + + + E ++C K +D++++G + + L H
Sbjct: 344 QHCLTTEKKVSSESVIDCFKHFDRSDSGYISSSMLRH 380
>SB_10943| Best HMM Match : efhand (HMM E-Value=6.4e-07)
Length = 154
Score = 44.4 bits (100), Expect = 9e-05
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Frame = +2
Query: 119 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXXFLPIYSQAK 298
F +YD G KID LG +LRA NPT + + FLPIY
Sbjct: 18 FDLYDTTGSEKIDVGYLGQVLRAAGLNPTQSEV--RKVERDFGKSAMAFDEFLPIYHSVT 75
Query: 299 K----DKDQGAYEDFLECLKLYDKNENGLMLGAELTH 397
+ + + + E ++C K +D++++G + + L H
Sbjct: 76 QHCLTTEKKVSSESVIDCFKHFDRSDSGYISSSMLRH 112
>SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 38.3 bits (85), Expect = 0.006
Identities = 25/103 (24%), Positives = 42/103 (40%)
Frame = +2
Query: 83 LSKHXVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXX 262
+++ + AF +D G G+IDA LG ++R++ +P +
Sbjct: 9 ITEEQIREFKNAFMSFDKNGDGRIDAEELGIVMRSIGLHPKDEELKAMIKQADKDGSGDI 68
Query: 263 XXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAEL 391
I A K K+ D E L+DK+ NGL+ E+
Sbjct: 69 DLPEF-IELMASKSKNDTTESDLREAFSLFDKDGNGLISAQEM 110
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/92 (25%), Positives = 35/92 (38%)
Frame = +2
Query: 116 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXXFLPIYSQA 295
AF +D G+IDA L + R++ +P + I A
Sbjct: 149 AFMSFDKNVDGRIDAEELEIVTRSIGLHPKDEELKAMIKQADKDGSGDIDLPEF-IELMA 207
Query: 296 KKDKDQGAYEDFLECLKLYDKNENGLMLGAEL 391
K K+ D E L+DK+ NGL+ E+
Sbjct: 208 SKSKNDTTESDLREAFSLFDKDGNGLISAQEM 239
>SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05)
Length = 69
Score = 34.7 bits (76), Expect = 0.071
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 329 FLECLKLYDKNENGLMLGAELTH 397
F+EC K++D+N NGL+ AEL H
Sbjct: 7 FMECFKVFDRNGNGLIGAAELRH 29
>SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16)
Length = 285
Score = 34.3 bits (75), Expect = 0.093
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 83 LSKHXVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPT 205
LSK + AF+++D + G I + LG ++RAL NPT
Sbjct: 4 LSKAQIAEYKEAFNMFDNDRNGTICSHELGSVMRALGQNPT 44
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 33.5 bits (73), Expect = 0.16
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 5/137 (3%)
Frame = +3
Query: 84 SASTXLKGRLSPSQSTTLKAKARSMPSTLAIS*ERSTQTPHWQPSRNSVVQR---RRARS 254
S+ T K + SPS+S+ K +S+P ++A S +T + QPS NS +R +R+
Sbjct: 346 SSLTSRKSQ-SPSKSSGSSQKKQSLPPSIATSSVGIKRTKNPQPSLNSSSERLHTKRSSL 404
Query: 255 CSHSKSSFPSTAKQRK-TKTRERMKI-SWNV*SCMTRTKTVSCLALSSHTLLALGEKLDD 428
KSS K+ + + ER+ + +V TR ++VS + ++ A G+K +
Sbjct: 405 VPLEKSSDKLRVKRPSLSASSERLSVRKQSVSKIDTRRRSVSGIK-TTRGGKAAGKKATE 463
Query: 429 SEVAEVTKDCMDPEDDD 479
E+ + + + EDD+
Sbjct: 464 VEMKSESSE-TESEDDE 479
>SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 1/98 (1%)
Frame = +2
Query: 116 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI-XXXXXXXXXXXXXXXXXXFLPIYSQ 292
AF +YD +G G + L +R L NPT I F+ +
Sbjct: 153 AFHMYDADGSGHVTTKELHKAMRTLGFNPTEEEIQEMVNEVDYDGNGVLDFNEFVDLMEN 212
Query: 293 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHASC 406
KK ++ +D + ++D ++ G + +EL C
Sbjct: 213 QKKPDEE--EQDLINAFHVFDSDDKGYIEASELRDLLC 248
>SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26)
Length = 213
Score = 32.7 bits (71), Expect = 0.28
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +2
Query: 179 LRALNSNPTLATIXXXXXXXXXXXXXXXXX-XFLPIYSQAKKDKDQGAYEDFLECLKLYD 355
+R+L NPT A + FL + AKK +Q + E+ E +++D
Sbjct: 1 MRSLGQNPTEAELQDMINEVDADGNGIIDFPEFLTM--MAKKMGEQDSDEEIREAFRVFD 58
Query: 356 KNENGLMLGAELTH 397
K+ NG + AEL H
Sbjct: 59 KDGNGFISAAELRH 72
>SB_42726| Best HMM Match : efhand (HMM E-Value=6.4e-07)
Length = 49
Score = 31.9 bits (69), Expect = 0.50
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 116 AFSIYDFEGKGKIDAFNLGDLLRALNSNPT 205
AF +D +G G I LG ++R+L NPT
Sbjct: 5 AFKFFDKDGNGHITTRELGAIMRSLGQNPT 34
>SB_15743| Best HMM Match : efhand (HMM E-Value=3.6e-07)
Length = 97
Score = 31.9 bits (69), Expect = 0.50
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 116 AFSIYDFEGKGKIDAFNLGDLLRALNSNPT 205
AF +D +G G I LG ++R+L NPT
Sbjct: 53 AFKFFDKDGNGHITTRELGAIMRSLGQNPT 82
>SB_29567| Best HMM Match : Polysacc_deac_1 (HMM E-Value=7.7)
Length = 760
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 181 ESAQLKPHTGNHRETRWYKEEGREAAHTRRVPSHLQPSKERQRPGSV*R 327
+ A L + R ++WY A+T V +H++ R+RP SV R
Sbjct: 703 DGAHLIQYKDGVRRSQWYHIRAFVLAYTNSVATHVEADPSRRRPPSVDR 751
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +3
Query: 36 SESREGTEKHHTK*AXSASTXLKGRLSPSQSTTLKAKA-RSMPSTLAIS*ERSTQTPHWQ 212
++ + +K T S T K L+ S+ T+ K RS+ ++ S + S +T +
Sbjct: 85 NQQNKPEDKQQTTPKTSRKTSQKTSLNASRKTSRKTSLKRSLKTSPKTSLKTSRKTDR-K 143
Query: 213 PSRNSVVQRRRARSCSHSKSSFPSTAKQRKTKTRERMKIS 332
SRN+ +R S S + P T+ + +KT + ++
Sbjct: 144 KSRNTSPKRSPKTSSKSSPKTSPKTSLKTSSKTSPKTSLN 183
>SB_6450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 692
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/87 (27%), Positives = 43/87 (49%)
Frame = +3
Query: 57 EKHHTK*AXSASTXLKGRLSPSQSTTLKAKARSMPSTLAIS*ERSTQTPHWQPSRNSVVQ 236
E +TK A + + + S +++ K+ +R S+LA S + TQT + +PS S
Sbjct: 4 EAKNTKPAAMSMDSFRAKKGTSSTSSPKS-SRPGRSSLASSTDSITQTSNARPSSASKPS 62
Query: 237 RRRARSCSHSKSSFPSTAKQRKTKTRE 317
R RS S + + +QR+ K ++
Sbjct: 63 NSRTRSA--SVENLDMSLQQRRDKVKQ 87
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/45 (22%), Positives = 28/45 (62%)
Frame = +2
Query: 56 RKTPHKMSXLSKHXVERASFAFSIYDFEGKGKIDAFNLGDLLRAL 190
++TP + + +++++YDFEG+G++ +L +L++++
Sbjct: 240 KETPECGMSVKSASSDHQEWSYTLYDFEGQGQVTREDLRNLVKSI 284
>SB_43494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 258 SHSKSSFPSTAKQRKTKTRERMKISWNV*SCMTRT 362
SHS +F S R KT+ +++I NV C+T+T
Sbjct: 8 SHSTGAFTSFKSNRVHKTQCKIQIDTNVLRCLTQT 42
>SB_43877| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 447 TKDCMDPEDDDGMIPYAAFLKKVMAXKTSQLVISLVIRS 563
+KD +D D PY LK + A SQLV S ++ S
Sbjct: 21 SKDALDAITGDHFNPYCKDLKDISAAPKSQLVASAILLS 59
>SB_14506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 86 SKHXVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNP 202
S+ +E AFS+Y+ +G I + +L+R+L NP
Sbjct: 222 SREQIEEFEDAFSVYNKDGSDNIKTTLVFNLIRSLGHNP 260
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +3
Query: 93 TXLKGRL-SPSQSTTLKAKARSMPSTLAIS*ERSTQTPHWQPSRNSVVQRRRARSCSHSK 269
T L R S + + + K RS + + S +++ R RRR+RS SHS
Sbjct: 642 TSLSSRSRSRDRGGSRRGKRRSRSRSSSYSSRSRSRSRSRDRGRGRKRSRRRSRSSSHSS 701
Query: 270 SSFPSTAKQRKTKTRERMK 326
SS + + +++ R R +
Sbjct: 702 SSLSRSRSRSRSRGRGRRR 720
>SB_23229| Best HMM Match : efhand (HMM E-Value=6.8e-25)
Length = 191
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 101 ERASFAFSIYDFEGKGKIDAFNLGDLLRAL 190
E+ +AFS+YD +G G I + +++RA+
Sbjct: 99 EKLKWAFSMYDLDGNGYISRQEMLEIVRAI 128
>SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)
Length = 153
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Frame = +2
Query: 107 ASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI-XXXXXXXXXXXXXXXXXXFLPI 283
AS FS++D +G G I L ++++L NP+ + FL +
Sbjct: 2 ASGGFSLFDKDGSGTISNEELEVVMKSLGQNPSDEELQQMIQEVDADGNGEVDFEEFLAM 61
Query: 284 YSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAEL 391
+ + +D A + E +++D+N +G + EL
Sbjct: 62 MKKQMQHRD--AEAEMREAFRVFDRNGDGSISEWEL 95
>SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23)
Length = 4240
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +3
Query: 51 GTEKHHTK*AXSA-STXLKGRLSPSQSTTLKAKARSMPSTLAIS*ERSTQTPHWQPSRNS 227
G++ HTK S + + +Q+ ++ + + S L + E+ H + + +
Sbjct: 2126 GSDSKHTKSTKDEKSKTVPEKQVQAQTKRMETEVKPTKSELENNNEKHMNDLHDESAFSK 2185
Query: 228 VVQRRRARSCSHSKSSFPSTAKQRKTKTRER 320
+V + RA S HS+S P+TA+ TK ++
Sbjct: 2186 LVFKLRAGS--HSESKPPTTAESTMTKKHDQ 2214
>SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24)
Length = 127
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 47 GGNRKTPHKMSXLSKHXVERASFAFSIYDFEGKGKIDAFNL 169
GG RK L++ + AF ++D +G G IDA L
Sbjct: 11 GGQRKKTGPKPELTEEQKQEIREAFDLFDTDGSGTIDAKEL 51
>SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2462
Score = 28.7 bits (61), Expect = 4.6
Identities = 32/136 (23%), Positives = 55/136 (40%), Gaps = 2/136 (1%)
Frame = +3
Query: 141 AKARSMPSTLAIS*ERSTQ-TPHWQPSRNSVVQRRRARSCSHSKS-SFPSTAKQRKTKTR 314
A + P T++ E +T TP PSRN + + + SH + ++
Sbjct: 1710 ASTPTTPKTVSTIPEEATSVTPSTSPSRNFRFPKTKMKDDSHGHPLKLIIKTEGGESNAT 1769
Query: 315 ERMKISWNV*SCMTRTKTVSCLALSSHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPY 494
+ + T TK +A SS++ +A+ E+ D V E+ MD +
Sbjct: 1770 SCLSSPCSPRESETETKPTPSIA-SSNSDIAMDEEADGGMVDEMGGSSMDDHRFMSLAGR 1828
Query: 495 AAFLKKVMAXKTSQLV 542
A L ++A K + LV
Sbjct: 1829 LASLVVLLAAKATLLV 1844
>SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94)
Length = 450
Score = 28.3 bits (60), Expect = 6.1
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +3
Query: 114 SPSQSTTLKAKARSMPSTLAIS*ERSTQTP-HWQPSRNSVVQRRRARSC-SHSKS-SFPS 284
SP+++ + + P + S R +Q+P H P R S R + S S+S + S
Sbjct: 363 SPNRAPVSQRQRSQSPQRVQASPRRRSQSPDHVSPRRKSQTPNRASTSTRQQSRSPNRAS 422
Query: 285 TAKQRKTKTRERMKIS 332
T+ +R++K+ R +S
Sbjct: 423 TSSRRQSKSPNRDPVS 438
>SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026)
Length = 3342
Score = 28.3 bits (60), Expect = 6.1
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Frame = +3
Query: 144 KARSMPSTLAIS*ERSTQTPHWQPSRNSVVQRRRARSCSHSKSSFPSTAKQRKTKTRER- 320
K S S +S E ST+ P+ + + S PST K KTK RE
Sbjct: 116 KTHSASSYRVLSFE-STKVLTSTPTLTTTPTKPFTAKFKESLGEHPSTVKTMKTKKRESP 174
Query: 321 MKISWN-V*SCMTRTKTVSCLALSSHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIP 491
KI N S RTKT + + ++ +++ +++ + + P+ D G+ P
Sbjct: 175 SKIIKNYTKSTGPRTKTKTINIMPGVVVITASQRIKNTKRHKSHRYSYKPKKDKGVKP 232
>SB_36972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 270
Score = 28.3 bits (60), Expect = 6.1
Identities = 24/88 (27%), Positives = 35/88 (39%)
Frame = +3
Query: 108 RLSPSQSTTLKAKARSMPSTLAIS*ERSTQTPHWQPSRNSVVQRRRARSCSHSKSSFPST 287
RLS S + P A+ T ++P N+V + A + + FP
Sbjct: 96 RLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEP--NTVTNVKPANATTSYDKHFPKD 153
Query: 288 AKQRKTKTRERMKISWNV*SCMTRTKTV 371
RK R +KIS+ SCM TK +
Sbjct: 154 NHLRKIFNRNTIKISY---SCMNNTKQI 178
>SB_1431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1748
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = -3
Query: 423 QASHLVQEACVSSAPSMRPFSFLSYSFRHSRKSSYAPWSLSFF 295
+A H+++ C+ P+ + F F++ + +H K + S S +
Sbjct: 53 KAYHIIKSLCLPEKPADKTFEFIAKAVKHHLKPKLSEASASLY 95
>SB_57512| Best HMM Match : DUF573 (HMM E-Value=4.7)
Length = 252
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 276 FPSTAKQRKTKTRERMKISWNV*SCMTRTKTV 371
FP K RK R MKIS+ SCM+ TK +
Sbjct: 54 FPKDHKLRKIFNRNTMKISY---SCMSNTKQI 82
>SB_47769| Best HMM Match : zf-CCHC (HMM E-Value=0.00034)
Length = 616
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = -3
Query: 423 QASHLVQEACVSSAPSMRPFSFLSYSFRHSRKSSYAPWSLSFF 295
+A H+++ C+ P+ + F F++ + +H K + S S +
Sbjct: 53 KAYHIIKSLCLPEKPADKTFEFITKAVKHHFKPKLSEASASLY 95
>SB_41482| Best HMM Match : Retrotrans_gag (HMM E-Value=0.21)
Length = 209
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = -3
Query: 423 QASHLVQEACVSSAPSMRPFSFLSYSFRHSRKSSYAPWSLSFF 295
+A H+++ C+ P+ + F F++ + +H K + S S +
Sbjct: 53 KAYHIIKSLCLPEKPADKTFEFITKAVKHHFKPKLSEASASLY 95
>SB_15829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = -3
Query: 423 QASHLVQEACVSSAPSMRPFSFLSYSFRHSRKSSYAPWSLSFF 295
+A H+++ C+ P+ + F F++ + +H K + S S +
Sbjct: 53 KAYHIIKSLCLPEKPADKTFEFITKAVKHHFKPKLSEASASLY 95
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 27.9 bits (59), Expect = 8.1
Identities = 28/127 (22%), Positives = 49/127 (38%), Gaps = 3/127 (2%)
Frame = +3
Query: 108 RLSPSQSTTLKAKARSMPSTLAIS*ERSTQTPHWQPSRNSVVQRRRARSCSHSKSSFPST 287
R + S+T KA+ + S ST + +PSR+ + SH+ T
Sbjct: 1607 RTTSRSSSTSSVKAKRVVKKKRRS-HSSTASSDGKPSRDETTEEHVFEFESHTSEETHVT 1665
Query: 288 AKQRKTKTRERMK---ISWNV*SCMTRTKTVSCLALSSHTLLALGEKLDDSEVAEVTKDC 458
+Q T E K + + ++ S A + + DD + +V+ D
Sbjct: 1666 TRQEPTAEEEEEKSPPLPPRSPELLAELESSSRDATREQEKEFVKDDDDDDSLTDVSLDN 1725
Query: 459 MDPEDDD 479
+D +DDD
Sbjct: 1726 LDSDDDD 1732
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Frame = -3
Query: 510 SSGMLRRG---SCRHRLQGPCSPL*LQRLHCRQAS--HLVQEACVSSAPSMRPFSFLSY 349
S+G R G C +G C LH Q HL A SS+PS +PF+ + Y
Sbjct: 328 STGCNREGFPRGCEQGYKGLCQVQRYSSLHDLQLGYQHLPPIASSSSSPSRKPFAIILY 386
>SB_50098| Best HMM Match : DUF573 (HMM E-Value=4.7)
Length = 151
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 276 FPSTAKQRKTKTRERMKISWNV*SCMTRTKTV 371
FP K RK R MKIS+ SCM+ TK +
Sbjct: 4 FPKDHKLRKIFNRNTMKISY---SCMSNTKQI 32
>SB_47793| Best HMM Match : Retrotrans_gag (HMM E-Value=0.21)
Length = 209
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = -3
Query: 423 QASHLVQEACVSSAPSMRPFSFLSYSFRHSRKSSYAPWSLSFF 295
+A H+++ C+ P+ + F F++ + +H K + S S +
Sbjct: 53 KAYHIIKSLCLPEKPADKTFEFITKAVKHHFKPKLSEASASLY 95
>SB_45402| Best HMM Match : zf-CCHC (HMM E-Value=0.00034)
Length = 388
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = -3
Query: 423 QASHLVQEACVSSAPSMRPFSFLSYSFRHSRKSSYAPWSLSFF 295
+A H+++ C+ P+ + F F++ + +H K + S S +
Sbjct: 53 KAYHIIKSLCLPEKPADKTFEFITKAVKHHFKPKLSEASASLY 95
>SB_44931| Best HMM Match : zf-CCHC (HMM E-Value=0.00034)
Length = 388
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = -3
Query: 423 QASHLVQEACVSSAPSMRPFSFLSYSFRHSRKSSYAPWSLSFF 295
+A H+++ C+ P+ + F F++ + +H K + S S +
Sbjct: 53 KAYHIIKSLCLPEKPADKTFEFITKAVKHHFKPKLSEASASLY 95
>SB_35785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1089
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = -3
Query: 423 QASHLVQEACVSSAPSMRPFSFLSYSFRHSRKSSYAPWSLSFF 295
+A H+++ C+ P+ + F F++ + +H K + S S +
Sbjct: 174 KAYHIIKSLCLPEKPADKTFEFITKAVKHHFKPKLSEASASLY 216
>SB_35576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 345 SCMTRTKTVSCLALSSHTLLALGEKLDDSEVAEVTKDCMDPEDD 476
+C+ + +C LSS GE +D + + T DC D D+
Sbjct: 1143 ACLDFSDEANCKCLSSKFACESGECIDVVGLCDGTDDCKDASDE 1186
>SB_866| Best HMM Match : efhand (HMM E-Value=7.4e-18)
Length = 171
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +2
Query: 53 NRKTPHKMSXLSKHXVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPT 205
+R T + + + ++ AF++ D G ID +L D+L +L +PT
Sbjct: 15 HRATSNVFAMFDQSQIQEFKEAFNMIDQNHDGFIDKEDLHDMLASLGKDPT 65
>SB_489| Best HMM Match : zf-CCHC (HMM E-Value=0.00034)
Length = 329
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = -3
Query: 423 QASHLVQEACVSSAPSMRPFSFLSYSFRHSRKSSYAPWSLSFF 295
+A H+++ C+ P+ + F F++ + +H K + S S +
Sbjct: 92 KAYHIIKSLCLPEKPADKTFEFITKAVKHHFKPKLSEASASLY 134
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,464,708
Number of Sequences: 59808
Number of extensions: 362234
Number of successful extensions: 1279
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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