Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_M06
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...   122   1e-29
AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal ...    27   0.42 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   0.96 
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   6.8  

>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score =  122 bits (293), Expect = 1e-29
 Identities = 56/101 (55%), Positives = 71/101 (70%)
 Frame = +2

Query: 98  VERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXXFL 277
           +E+A F FS+YD+EG G++DA +LG+ LRALN NPT+  I                  FL
Sbjct: 10  IEKAQFVFSVYDWEGSGQMDAMDLGNALRALNLNPTIELIGKMGGTQKRGEKKIKFEEFL 69

Query: 278 PIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHA 400
           PI+SQ KK+K+QG +EDFLECLKLYDKNE+G ML AELTH+
Sbjct: 70  PIFSQVKKEKEQGCFEDFLECLKLYDKNEDGTMLLAELTHS 110



 Score = 72.5 bits (170), Expect = 1e-14
 Identities = 33/47 (70%), Positives = 38/47 (80%)
 Frame = +3

Query: 378 LALSSHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVM 518
           LA  +H+L ALGE+LDD E+  V KDCMDPEDDDG IPYA FLKK+M
Sbjct: 104 LAELTHSLTALGERLDDVELDNVMKDCMDPEDDDGNIPYAPFLKKMM 150


>AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal
           carrier protein AP-1 protein.
          Length = 171

 Score = 27.5 bits (58), Expect = 0.42
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 366 TVSCLALSSHTLLALGEKLDDSEVAEVTKDCMDP 467
           T+ C A S   ++      DD    +VT++C+DP
Sbjct: 59  TLKCPAESFKCVIVKNSTKDDVNKVQVTRECLDP 92


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.2 bits (55), Expect = 0.96
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 411  GEKLDDSEVAEVTKDCMDPEDDDG 482
            G K+++  +AEV K  +D EDD G
Sbjct: 1250 GLKMENGVIAEVEKSQVDGEDDTG 1273


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +2

Query: 77   SXLSKHXVERASFAFSIYDFEGKGKIDAFNLGDLLRALN 193
            S L  H ++     +S YD + KG+I   ++  LLR ++
Sbjct: 1436 SILGPHHLDEFVRLWSEYDPDAKGRIKHLDVVTLLRKIS 1474


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,663
Number of Sequences: 2352
Number of extensions: 10769
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)