Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_M04
         (408 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83112-1|CAB05538.1|  742|Caenorhabditis elegans Hypothetical pr...    29   1.7  
AF067940-6|AAC19205.1|  223|Caenorhabditis elegans Hypothetical ...    27   6.9  
AF016685-7|AAG24151.1|  341|Caenorhabditis elegans Seven tm rece...    27   6.9  
AC025727-10|AAK66029.1|  707|Caenorhabditis elegans Hypothetical...    26   9.1  

>Z83112-1|CAB05538.1|  742|Caenorhabditis elegans Hypothetical
           protein K02B7.1 protein.
          Length = 742

 Score = 28.7 bits (61), Expect = 1.7
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 146 PSWSPLGRGCCQLQNGFVERYHVPIYLVLSNC 241
           P +SP G G C  QN ++   H+  +L    C
Sbjct: 429 PHYSPKGNGICSRQNRWIFHQHLRFHLDFVRC 460


>AF067940-6|AAC19205.1|  223|Caenorhabditis elegans Hypothetical
           protein F36F12.6 protein.
          Length = 223

 Score = 26.6 bits (56), Expect = 6.9
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 186 CSWQQPRPSGDQ 151
           C+WQ PRPS D+
Sbjct: 199 CTWQDPRPSSDK 210


>AF016685-7|AAG24151.1|  341|Caenorhabditis elegans Seven tm
           receptor protein 86 protein.
          Length = 341

 Score = 26.6 bits (56), Expect = 6.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 182 LQNGFVERYHVPIYLVLSNCKFCFNLSII 268
           L  G+V RY  PI+L+   C F F L ++
Sbjct: 75  LYEGYVSRYLAPIFLI-DFCAFYFTLILL 102


>AC025727-10|AAK66029.1|  707|Caenorhabditis elegans Hypothetical
           protein Y73E7A.8 protein.
          Length = 707

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +2

Query: 134 IRRPPSWSPLGRGCCQLQNGFVERYHVPIYLVLSNCKFCFNLSIIA*WLNWNFSS 298
           +  PPSW+P GR      NGF         L+ +N +  +  S+ A W  W+F S
Sbjct: 24  VTTPPSWAPTGR--LNQFNGFATPRP---SLLPANAQMVY-ASVWAAWSAWSFCS 72


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,612,269
Number of Sequences: 27780
Number of extensions: 171594
Number of successful extensions: 436
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)