Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_M02
         (829 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    25   0.85 
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   3.4  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    23   4.6  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    23   4.6  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    23   4.6  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    23   4.6  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    23   4.6  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    23   4.6  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    23   4.6  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    23   4.6  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    23   4.6  
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    23   4.6  
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    23   4.6  
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    23   4.6  
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    23   4.6  
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    23   4.6  
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    23   4.6  
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    23   4.6  
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    23   4.6  
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    23   4.6  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    23   4.6  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    23   4.6  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    22   6.0  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    22   6.0  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    22   6.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   8.0  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 25.0 bits (52), Expect = 0.85
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -3

Query: 776 KLRQMLAVLLSXXWARLHSHPSLVVYALTSSY 681
           K+   + +L    WA  H+   L VYA  S Y
Sbjct: 270 KMLSAVVILFFICWAPFHTQRLLYVYAQESDY 301


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 459 LLVSVFGWLPGLVAQLTFISL 397
           L V+V  W  G+ A LT+ISL
Sbjct: 79  LFVTVPRWRNGIPATLTYISL 99


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 776 YNQSSPTNTTVYCGGFP 826
           Y +  P    VYCG FP
Sbjct: 115 YIEQIPIPVPVYCGNFP 131


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 791 PTNTTVYCGGFPS 829
           P    +YCG FPS
Sbjct: 122 PVPVPIYCGNFPS 134


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 791 PTNTTVYCGGFPS 829
           P    +YCG FPS
Sbjct: 122 PVPVPIYCGNFPS 134


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 791 PTNTTVYCGGFPS 829
           P    +YCG FPS
Sbjct: 122 PVPVPIYCGNFPS 134


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 791 PTNTTVYCGGFPS 829
           P    +YCG FPS
Sbjct: 122 PVPVPIYCGNFPS 134


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 791 PTNTTVYCGGFPS 829
           P    +YCG FPS
Sbjct: 122 PVPVPIYCGNFPS 134


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 791 PTNTTVYCGGFPS 829
           P    +YCG FPS
Sbjct: 122 PVPVPIYCGNFPS 134


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 791 PTNTTVYCGGFPS 829
           P    +YCG FPS
Sbjct: 122 PVPVPIYCGNFPS 134


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 791 PTNTTVYCGGFPS 829
           P    +YCG FPS
Sbjct: 125 PVPVPIYCGNFPS 137


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 776 YNQSSPTNTTVYCGGFP 826
           Y +  P    VYCG FP
Sbjct: 115 YIEQIPIPVPVYCGNFP 131


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 776 YNQSSPTNTTVYCGGFP 826
           Y +  P    VYCG FP
Sbjct: 115 YIEQIPIPVPVYCGNFP 131


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 776 YNQSSPTNTTVYCGGFP 826
           Y +  P    VYCG FP
Sbjct: 115 YIEQIPIPVPVYCGNFP 131


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 776 YNQSSPTNTTVYCGGFP 826
           Y +  P    VYCG FP
Sbjct: 115 YIEQIPIPVPVYCGNFP 131


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 776 YNQSSPTNTTVYCGGFP 826
           Y +  P    VYCG FP
Sbjct: 115 YIEQIPIPVPVYCGNFP 131


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 776 YNQSSPTNTTVYCGGFP 826
           Y +  P    VYCG FP
Sbjct: 115 YIEQIPIPVPVYCGNFP 131


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 776 YNQSSPTNTTVYCGGFP 826
           Y +  P    VYCG FP
Sbjct: 115 YIEQIPIPVPVYCGNFP 131


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 776 YNQSSPTNTTVYCGGFP 826
           Y +  P    VYCG FP
Sbjct: 115 YIEQIPIPVPVYCGNFP 131


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 8/25 (32%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
 Frame = +2

Query: 755 QPTFDEVYN-QSSPTNTTVYCGGFP 826
           +P +  + N +  P    +YCG FP
Sbjct: 332 KPLYYNIINIEQIPVPVPIYCGNFP 356


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 776 YNQSSPTNTTVYCGGFP 826
           Y +  P    VYCG FP
Sbjct: 348 YIEQIPIPVPVYCGNFP 364


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 776 YNQSSPTNTTVYCGGFP 826
           Y +  P    VYCG FP
Sbjct: 348 YIEQIPIPVPVYCGNFP 364


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 776 YNQSSPTNTTVYCGGFP 826
           Y +  P    +YCG FP
Sbjct: 113 YIEQIPIPVPIYCGNFP 129


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 776 YNQSSPTNTTVYCGGFP 826
           Y +  P    +YCG FP
Sbjct: 113 YIEQIPIPVPIYCGNFP 129


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 776 YNQSSPTNTTVYCGGFP 826
           Y +  P    +YCG FP
Sbjct: 113 YIEQIPIPVPIYCGNFP 129


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 209 YVGNLDPSVTEVFLCTLFGQIGDVK 283
           YVG+ D  +  +   T +   GD+K
Sbjct: 797 YVGSEDSVIPRILYLTWYSSNGDIK 821


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,430
Number of Sequences: 438
Number of extensions: 5221
Number of successful extensions: 63
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)