Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_M01
         (733 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3593|AAM68248.1|   82|Drosophila melanogaster CG30415-P...    31   2.1  
AE013599-3592|AAM68247.1|   82|Drosophila melanogaster CG30415-P...    31   2.1  
AJ243264-1|CAB53640.1| 1035|Drosophila melanogaster putative orp...    29   6.5  
AE014296-2899|AAN11708.1|  976|Drosophila melanogaster CG3897-PD...    29   6.5  
AE014296-2898|AAN11707.1|  976|Drosophila melanogaster CG3897-PB...    29   6.5  

>AE013599-3593|AAM68248.1|   82|Drosophila melanogaster CG30415-PB,
           isoform B protein.
          Length = 82

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +3

Query: 375 KLEHFPIRYYKYRQWLW-YVYLCELKC 452
           K+  FPI++Y   QW+W Y ++  + C
Sbjct: 24  KIAQFPIKHYIKNQWIWRYYFIAAVAC 50


>AE013599-3592|AAM68247.1|   82|Drosophila melanogaster CG30415-PA,
           isoform A protein.
          Length = 82

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +3

Query: 375 KLEHFPIRYYKYRQWLW-YVYLCELKC 452
           K+  FPI++Y   QW+W Y ++  + C
Sbjct: 24  KIAQFPIKHYIKNQWIWRYYFIAAVAC 50


>AJ243264-1|CAB53640.1| 1035|Drosophila melanogaster putative orphan
           neurotransmittertransporter protein.
          Length = 1035

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = -2

Query: 492 SNIHHLSYVNFQKNTLTHISKHTTATVCI-YNTE*ENALTFKIIMERYSQAYIISYVI 322
           SN   L  V  + N  T  S      +C+  N    N + F   ++RY  AY++ YV+
Sbjct: 198 SNAKLLPAVEDESNKQTKCSVFRGLVLCLCLNLSYANVVRFPRELDRYGSAYLVPYVV 255


>AE014296-2899|AAN11708.1|  976|Drosophila melanogaster CG3897-PD,
           isoform D protein.
          Length = 976

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = -2

Query: 492 SNIHHLSYVNFQKNTLTHISKHTTATVCI-YNTE*ENALTFKIIMERYSQAYIISYVI 322
           SN   L  V  + N  T  S      +C+  N    N + F   ++RY  AY++ YV+
Sbjct: 198 SNAKLLPAVEDESNKQTKCSVFRGLVLCLCLNLSYANVVRFPRELDRYGSAYLVPYVV 255


>AE014296-2898|AAN11707.1|  976|Drosophila melanogaster CG3897-PB,
           isoform B protein.
          Length = 976

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = -2

Query: 492 SNIHHLSYVNFQKNTLTHISKHTTATVCI-YNTE*ENALTFKIIMERYSQAYIISYVI 322
           SN   L  V  + N  T  S      +C+  N    N + F   ++RY  AY++ YV+
Sbjct: 198 SNAKLLPAVEDESNKQTKCSVFRGLVLCLCLNLSYANVVRFPRELDRYGSAYLVPYVV 255


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,624,409
Number of Sequences: 53049
Number of extensions: 636152
Number of successful extensions: 1266
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1266
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)