Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_L21
         (455 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   1.8  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   5.5  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.2  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 14/40 (35%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
 Frame = -1

Query: 305 VPPP*SITFPTECTNSFPLAPYLNAVNPP---KRPPLAIP 195
           +PP  S T  T  T  F   P     N P    +PP A P
Sbjct: 161 LPPTTSTTTRTTLTTKFTTKPSTKPTNKPVVVTKPPQAPP 200


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 275 TECTNSFPLAPYLN 234
           +E    +PLAP+LN
Sbjct: 354 SETLRKYPLAPFLN 367


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = -1

Query: 281 FPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKP 183
           +P +   S  L+P  +  NPP     A P   P
Sbjct: 268 YPMQRPKSASLSPPPHVYNPPDHIQQATPYSAP 300


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,061
Number of Sequences: 336
Number of extensions: 2126
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)