Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_L17
         (536 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   1.7  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    23   1.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.3  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    22   3.9  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    22   3.9  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 84  GTRLFSCASCDVNLTNRSELIS 149
           G++ F C  CD    N+S L S
Sbjct: 255 GSKPFQCNKCDYTCVNKSMLNS 276


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 84  GTRLFSCASCDVNLTNRSELIS 149
           G++ F C  CD    N+S L S
Sbjct: 13  GSKPFQCNKCDYTCVNKSMLNS 34


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 348 DQSSFQYYSPFLVSLILFSCKFIYPTQLRTAVL 250
           D+    ++SPFLV+ + F     Y T + T ++
Sbjct: 390 DKGDIFWFSPFLVANLAFVTIVTYETFVWTQIM 422



 Score = 20.6 bits (41), Expect = 9.1
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +1

Query: 19  NLSVLTLLNFKKWVKXFLIILEERXYFHAHHAMSILRIV 135
           NL V+     K W   F++       FH + A    RI+
Sbjct: 98  NLKVVATTKTKAWFLPFVVTNIIFVLFHTYEAFVWTRIM 136


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -2

Query: 250 YKKHHAPCDVLLASHDPELPNRLDSQPVAP 161
           YK H++   ++    DPE+P R+   P +P
Sbjct: 33  YKFHNSRW-MVAGKADPEMPKRMYIHPDSP 61


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -2

Query: 250 YKKHHAPCDVLLASHDPELPNRLDSQPVAP 161
           YK H++   ++    DPE+P R+   P +P
Sbjct: 33  YKFHNSRW-MVAGKADPEMPKRMYIHPDSP 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,223
Number of Sequences: 336
Number of extensions: 1717
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)