Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_L17
         (536 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35600-4|CAB54236.1|  137|Caenorhabditis elegans Hypothetical pr...    70   1e-12
AF038604-4|AAO38680.1|  134|Caenorhabditis elegans Hypothetical ...    68   4e-12
AF038604-3|AAB92012.1|  161|Caenorhabditis elegans Hypothetical ...    68   4e-12
AF038604-2|AAB92013.1|  468|Caenorhabditis elegans Hypothetical ...    55   4e-08
Z81528-1|CAB04282.1|  345|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z78062-4|CAB01498.2|  341|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical p...    28   3.7  
AJ131181-1|CAA10315.1|  962|Caenorhabditis elegans DAF-18 protei...    27   8.6  
AF126286-1|AAD21620.1|  962|Caenorhabditis elegans PTEN phosphat...    27   8.6  
AF098286-1|AAD03420.1|  962|Caenorhabditis elegans DAF-18 protein.     27   8.6  
AF036706-19|AAK39284.1|  962|Caenorhabditis elegans Abnormal dau...    27   8.6  

>Z35600-4|CAB54236.1|  137|Caenorhabditis elegans Hypothetical
           protein F37A8.5 protein.
          Length = 137

 Score = 69.7 bits (163), Expect = 1e-12
 Identities = 31/67 (46%), Positives = 45/67 (67%)
 Frame = +1

Query: 172 VVNLIYSEVQDRVMLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVT 351
           VVN+     ++RV+LTG H V D+ C+ C T LGW YE A E +Q+YKEG+ I+E A + 
Sbjct: 67  VVNVGCGPAEERVLLTGLHAVADIYCEICKTTLGWKYEHAFESSQKYKEGKFIIELAHMV 126

Query: 352 ESDGIEE 372
           + +G +E
Sbjct: 127 KDNGWDE 133



 Score = 33.5 bits (73), Expect = 0.099
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +3

Query: 51  KMGKXFLDHI-GGTRLFSCASCDVNLTNRSELISTRFTGATG 173
           K  K F  ++  G R +SC  C  NL   +ELIS  F G+ G
Sbjct: 18  KKQKTFQHYLPAGDRCYSCIHCRANLAAHAELISKSFQGSQG 59


>AF038604-4|AAO38680.1|  134|Caenorhabditis elegans Hypothetical
           protein B0546.4b protein.
          Length = 134

 Score = 68.1 bits (159), Expect = 4e-12
 Identities = 29/55 (52%), Positives = 36/55 (65%)
 Frame = +1

Query: 178 NLIYSEVQDRVMLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERA 342
           N++Y   + R M TG H VRDV C  C  KLGW+YE A  E+Q YKE +VI+E A
Sbjct: 51  NVVYGRCEHRKMTTGWHTVRDVFCVTCNQKLGWMYEMAVSESQTYKETQVIIENA 105



 Score = 33.5 bits (73), Expect = 0.099
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +3

Query: 54  MGKXFLDHIGGT-RLFSCASCDVNLTNRSELISTRFTGATGCESNLFGSSGSCDANRTSH 230
           MG+ F    G    L+ C  C+  LT   EL S  FTG+TG  + LF  + +    R  H
Sbjct: 1   MGRQFAGICGARGSLYGCVVCNTYLTCSKELTSKAFTGSTG-PATLFKRAWNVVYGRCEH 59


>AF038604-3|AAB92012.1|  161|Caenorhabditis elegans Hypothetical
           protein B0546.4a protein.
          Length = 161

 Score = 68.1 bits (159), Expect = 4e-12
 Identities = 29/55 (52%), Positives = 36/55 (65%)
 Frame = +1

Query: 178 NLIYSEVQDRVMLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERA 342
           N++Y   + R M TG H VRDV C  C  KLGW+YE A  E+Q YKE +VI+E A
Sbjct: 51  NVVYGRCEHRKMTTGWHTVRDVFCVTCNQKLGWMYEMAVSESQTYKETQVIIENA 105



 Score = 33.5 bits (73), Expect = 0.099
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +3

Query: 54  MGKXFLDHIGGT-RLFSCASCDVNLTNRSELISTRFTGATGCESNLFGSSGSCDANRTSH 230
           MG+ F    G    L+ C  C+  LT   EL S  FTG+TG  + LF  + +    R  H
Sbjct: 1   MGRQFAGICGARGSLYGCVVCNTYLTCSKELTSKAFTGSTG-PATLFKRAWNVVYGRCEH 59


>AF038604-2|AAB92013.1|  468|Caenorhabditis elegans Hypothetical
           protein B0546.3 protein.
          Length = 468

 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
 Frame = +1

Query: 244 SCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESDGIEEI-QVN 384
           S K+C  +LGW+YE A  +N++YKEG VILER  +TE +   +I Q+N
Sbjct: 3   SVKSCRAQLGWMYELAPNDNEKYKEGSVILERMNITEREAFSKISQMN 50


>Z81528-1|CAB04282.1|  345|Caenorhabditis elegans Hypothetical
           protein F35E2.1 protein.
          Length = 345

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = -2

Query: 340 LVPILLSLPCIFDSLQLQIHIPNPASYRSSY 248
           ++P+++SLP +  S +    IP P+S+ S++
Sbjct: 248 VIPVIVSLPLLLLSFEFYFGIPMPSSFGSTW 278


>Z78062-4|CAB01498.2|  341|Caenorhabditis elegans Hypothetical
           protein F16D3.6 protein.
          Length = 341

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = -2

Query: 340 LVPILLSLPCIFDSLQLQIHIPNPASYRSSY 248
           ++P+++SLP +  S +    IP P+S+ S++
Sbjct: 244 VIPVIVSLPLLLLSFEFYFGIPMPSSFGSTW 274


>Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical
           protein Y41E3.9 protein.
          Length = 1440

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -1

Query: 86  SSNMIKKXFTHFLKFKRVSTDKXIWK 9
           S ++I + F HFLKF R++ DK  WK
Sbjct: 363 SDSLIVEVFGHFLKFFRLN-DKRAWK 387


>AJ131181-1|CAA10315.1|  962|Caenorhabditis elegans DAF-18 protein
           protein.
          Length = 962

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 316 PCIFDSLQLQIHIPNPASYRSSYKKHHAPCDVLLAS 209
           PC F S   ++H P    Y S+  K++  C   L S
Sbjct: 572 PCAFGSKGAEMHYPPSVRYSSNDGKYNGACSENLVS 607


>AF126286-1|AAD21620.1|  962|Caenorhabditis elegans PTEN
           phosphatidylinositol 3' phosphatasehomolog DAF-18
           protein.
          Length = 962

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 316 PCIFDSLQLQIHIPNPASYRSSYKKHHAPCDVLLAS 209
           PC F S   ++H P    Y S+  K++  C   L S
Sbjct: 572 PCAFGSKGAEMHYPPSVRYSSNDGKYNGACSENLVS 607


>AF098286-1|AAD03420.1|  962|Caenorhabditis elegans DAF-18 protein.
          Length = 962

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 316 PCIFDSLQLQIHIPNPASYRSSYKKHHAPCDVLLAS 209
           PC F S   ++H P    Y S+  K++  C   L S
Sbjct: 572 PCAFGSKGAEMHYPPSVRYSSNDGKYNGACSENLVS 607


>AF036706-19|AAK39284.1|  962|Caenorhabditis elegans Abnormal dauer
           formation protein 18 protein.
          Length = 962

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 316 PCIFDSLQLQIHIPNPASYRSSYKKHHAPCDVLLAS 209
           PC F S   ++H P    Y S+  K++  C   L S
Sbjct: 572 PCAFGSKGAEMHYPPSVRYSSNDGKYNGACSENLVS 607


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,620,039
Number of Sequences: 27780
Number of extensions: 167296
Number of successful extensions: 447
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)