Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_L15
(807 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.10c |cbh1|cbh|centromere binding protein |Schizosaccharo... 29 0.78
SPAC16A10.01 |||DUF1212 family protein|Schizosaccharomyces pombe... 28 1.4
SPBC15D4.07c |atg9|apg9|autophagy associated protein Atg9 |Schiz... 27 2.4
SPAC607.09c |btn1||battenin CLN3 family protein|Schizosaccharomy... 27 3.1
SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 3.1
SPAC57A7.10c |sec21||coatomer gamma subunit Sec21 |Schizosacchar... 27 4.1
SPBC6B1.08c |ofd1||2-oxoglutarate and Fe|Schizosaccharomyces pom... 27 4.1
SPAC20H4.02 |||conserved fungal protein|Schizosaccharomyces pomb... 26 7.2
SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr 2|... 26 7.2
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 26 7.2
SPAC13A11.06 ||SPAC3H8.01|pyruvate decarboxylase |Schizosaccharo... 25 9.6
>SPAC9E9.10c |cbh1|cbh|centromere binding protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 514
Score = 29.1 bits (62), Expect = 0.78
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 387 IRDFAGPYFVSEDLMAFGNPTKYWQLSPQKAN 482
I++F PY +D+ G + +W+L+P K N
Sbjct: 164 IQEFIRPY-AQKDIFCVGGTSLFWKLTPNKQN 194
>SPAC16A10.01 |||DUF1212 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 830
Score = 28.3 bits (60), Expect = 1.4
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 89 PVLISNN-LFPVLVRKNIFVP*LLFNSRKLSVICVCDERESHEKPV*PFGYY*SR 250
P L+S+N FP++ R I LF SR +V + SH KP PFG + SR
Sbjct: 283 PELLSHNEYFPMMKRGFISRFLCLFVSRDANVY-IGPLESSHAKPYRPFGSFVSR 336
>SPBC15D4.07c |atg9|apg9|autophagy associated protein Atg9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 702
Score = 27.5 bits (58), Expect = 2.4
Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 369 STSNGVIRDFAGPYFVSEDLMAFGNPTK--YWQLSPQKANNGQAGWDAAVAEASEIYK 536
S + +F P+F +ED+ G+P + Y QL + +N + W+ A +++
Sbjct: 119 SKQKPALPNFNDPHFYNEDVTRSGHPNRSIYTQLPRNEFSNARVLWNRLSARDRVLWR 176
>SPAC607.09c |btn1||battenin CLN3 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 396
Score = 27.1 bits (57), Expect = 3.1
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
Frame = +3
Query: 99 YLIICSQFLY-VKTFLFHNSFLILVNCL*FVFVMNENHTRSPS-----SPLDIID 245
YL++ + F + V++ L +SFL L + + FV+ E+ + SPS +P++ ID
Sbjct: 147 YLVMTTWFNFSVRSTLIISSFLPLFLLIMYFFVLPESESTSPSINNNYTPIESID 201
>SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 700
Score = 27.1 bits (57), Expect = 3.1
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = -2
Query: 317 SPNNTVRISTAVVVNRIHQHGLLLINNIQ---RARRASRVILVHHKHKLQTIYEN*KG 153
SPN+ + S + + + LLL+NN R S V L H +LQ E +G
Sbjct: 458 SPNSGINASVLTNADNLEKENLLLVNNNAFKVDDRSVSSVALDDHNRQLQMNVEELEG 515
>SPAC57A7.10c |sec21||coatomer gamma subunit Sec21
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 905
Score = 26.6 bits (56), Expect = 4.1
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 462 LSPQKANNGQAGWDAAVAEASEIYKKRMHIIFYDNCHSHVAKALNIMNYGGSRN 623
+SP +N +D+ EASE+Y + F C S VA+ L + G+ N
Sbjct: 795 ISPAYESNFDGLFDSLEHEASEVYVLSLLDSFRSTC-SRVAELLQMQPLEGTEN 847
>SPBC6B1.08c |ofd1||2-oxoglutarate and Fe|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 515
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 701 PRLEESSDTNIFRVWYHKNGQFNHVPI 621
P ++S+ YHKNG +NHV I
Sbjct: 15 PHALDTSEAERLSREYHKNGPYNHVVI 41
>SPAC20H4.02 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 250
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 714 VIVGIICGLAYVI*TLHRKRW 776
++VGIIC AY + LH RW
Sbjct: 232 ILVGIICNFAYGL--LHSYRW 250
>SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 997
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -3
Query: 427 KSSETKYGPAKSLITPLDVDIPICPRNGKNHVKTGIGVQ 311
K TKYG + S I P+ + + P HV T GV+
Sbjct: 722 KDYTTKYGLSMSYILPVLERLKLPPSARAQHVPTTAGVE 760
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 25.8 bits (54), Expect = 7.2
Identities = 19/88 (21%), Positives = 38/88 (43%)
Frame = +3
Query: 333 TWFFPFLGHMGISTSNGVIRDFAGPYFVSEDLMAFGNPTKYWQLSPQKANNGQAGWDAAV 512
T+F P +G M T NGV G Y + +M P + +N Q ++++
Sbjct: 671 TYFVPQMGGMMAYTMNGV-PPMYGQYAPNNGMMNMHYP----MYGDSRRSNSQRSFNSSN 725
Query: 513 AEASEIYKKRMHIIFYDNCHSHVAKALN 596
+ S ++K + + ++ + +LN
Sbjct: 726 GKRSNVHKNNNASNTFSHSNASTSSSLN 753
>SPAC13A11.06 ||SPAC3H8.01|pyruvate decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 571
Score = 25.4 bits (53), Expect = 9.6
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 314 DSYTCFNMVFPIPWTYGYINIQWSYQR 394
D YT ++ + +Y IN +W YQ+
Sbjct: 478 DGYTIERLIHGLHASYNEINTKWGYQQ 504
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,680,331
Number of Sequences: 5004
Number of extensions: 84800
Number of successful extensions: 219
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 219
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 392429240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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