Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_L15
(807 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006661-1|AAF39886.2| 168|Caenorhabditis elegans Hypothetical ... 192 2e-49
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ... 31 1.3
AC024206-4|AAK67240.1| 564|Caenorhabditis elegans Hypothetical ... 29 3.0
AC024206-3|AAF36052.1| 561|Caenorhabditis elegans Hypothetical ... 29 3.0
Z82284-3|CAB05293.1| 350|Caenorhabditis elegans Hypothetical pr... 29 3.9
AC199167-1|ABO33247.1| 233|Caenorhabditis elegans Hypothetical ... 29 3.9
Z68760-10|CAL49442.1| 1427|Caenorhabditis elegans Hypothetical p... 28 6.8
Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical pr... 28 6.8
AL132949-14|CAB61086.2| 276|Caenorhabditis elegans Hypothetical... 28 6.8
AL032657-1|CAA21732.1| 377|Caenorhabditis elegans Hypothetical ... 28 6.8
>AC006661-1|AAF39886.2| 168|Caenorhabditis elegans Hypothetical
protein H20J04.6 protein.
Length = 168
Score = 192 bits (469), Expect = 2e-49
Identities = 88/164 (53%), Positives = 108/164 (65%), Gaps = 4/164 (2%)
Frame = +3
Query: 261 LMDPIDHDRC----RYPYCIVWTPIPVLTWFFPFLGHMGISTSNGVIRDFAGPYFVSEDL 428
+M D D C RYPYCIVWTPIP LTWFFPF+GHMGI+ S G+IRDFAG Y+V+ED
Sbjct: 1 MMPLTDRDICPENNRYPYCIVWTPIPCLTWFFPFIGHMGIANSRGIIRDFAGSYYVAEDD 60
Query: 429 MAFGNPTKYWQLSPQKANNGQAGWDAAVAEASEIYKKRMHIIFYDNCHSHVAKALNIMNY 608
M FG PT+YWQL P+K G +D AV +AS+ YK R H + DNCHSHVA ALN M Y
Sbjct: 61 MGFGWPTRYWQLGPEKVEGGAEVFDRAVQDASDTYKTRTHNLICDNCHSHVALALNKMRY 120
Query: 609 GGSRNWNMVKLAIFMIPYSKYVSVGGFLKTWLPFLVIVGIICGL 740
+WNM+ LA + + +V L +LPF++IV I L
Sbjct: 121 DEREDWNMINLAWYSLTKGSFVRNTDMLAQYLPFVIIVFIFVAL 164
>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
protein F53H1.4a protein.
Length = 1370
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 477 ANNGQAGWDAAVAEASEIYKKRMHIIFYDNCH 572
A NG+ G D SE+ K+R+ +F D+CH
Sbjct: 597 AENGEIGDDEEENSESELQKQRILALFADSCH 628
>AC024206-4|AAK67240.1| 564|Caenorhabditis elegans Hypothetical
protein Y74C9A.4b protein.
Length = 564
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 186 VFVMNENHTRSPSSPLDIIDQEQAVLMDPIDHDRCRYPYC 305
+ V+++ R PS P + EQ++ DPID + CR C
Sbjct: 364 IMVVDDCLLRKPSGPYIV---EQSIEADPIDENTCRMTRC 400
>AC024206-3|AAF36052.1| 561|Caenorhabditis elegans Hypothetical
protein Y74C9A.4a protein.
Length = 561
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 186 VFVMNENHTRSPSSPLDIIDQEQAVLMDPIDHDRCRYPYC 305
+ V+++ R PS P + EQ++ DPID + CR C
Sbjct: 361 IMVVDDCLLRKPSGPYIV---EQSIEADPIDENTCRMTRC 397
>Z82284-3|CAB05293.1| 350|Caenorhabditis elegans Hypothetical
protein T27E7.4 protein.
Length = 350
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 552 IFYDNCHSHVAKALNIMNYGGSRNWNMVK---LAIFMIPYSKYVSVGGFLKTWLPFLVI 719
+FY N SH L++ Y G W +V + ++P V G +L+T+ FLVI
Sbjct: 1 MFYKNSASHTEPDLDVSIYTGQLYWWLVYNYFKELIIVPILFIVLAGIWLRTFPFFLVI 59
>AC199167-1|ABO33247.1| 233|Caenorhabditis elegans Hypothetical
protein cTel55X.1b protein.
Length = 233
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -1
Query: 594 LMLWQHENDSCRKILYAFAFYIFRTLLQLQHPIPPVHYWL 475
L ++ H + S IL A ++ L+ Q P+ +H+WL
Sbjct: 134 LAIYNHTSFSTSAILKGIAVFVTLYLIDFQPPLRLLHFWL 173
>Z68760-10|CAL49442.1| 1427|Caenorhabditis elegans Hypothetical
protein F36H1.2c protein.
Length = 1427
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 675 SVGGFLKTWLPFLVIVGIICGLAYVI*TLHRKRW 776
SV +L +W FL+I I C L V+ RK W
Sbjct: 514 SVTAYLISWSVFLLIFIIFCSLIVVVYYGDRKNW 547
>Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical
protein F36H1.2b protein.
Length = 1379
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 675 SVGGFLKTWLPFLVIVGIICGLAYVI*TLHRKRW 776
SV +L +W FL+I I C L V+ RK W
Sbjct: 514 SVTAYLISWSVFLLIFIIFCSLIVVVYYGDRKNW 547
>Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical
protein F36H1.2a protein.
Length = 1398
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 675 SVGGFLKTWLPFLVIVGIICGLAYVI*TLHRKRW 776
SV +L +W FL+I I C L V+ RK W
Sbjct: 514 SVTAYLISWSVFLLIFIIFCSLIVVVYYGDRKNW 547
>AL132949-14|CAB61086.2| 276|Caenorhabditis elegans Hypothetical
protein Y53F4B.16 protein.
Length = 276
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -2
Query: 788 HYSIPSFTM*CLYHISEPANDAHDHKER*PRLEESSDTNIFRVWYHKNGQFNHVP 624
H+S+ + T+ H+ P ND+H E L E T++ +WYH N+VP
Sbjct: 118 HFSVVNITV----HL--PENDSHP--ELLHLLAEIGVTDVESIWYHSMPLMNNVP 164
>AL032657-1|CAA21732.1| 377|Caenorhabditis elegans Hypothetical
protein Y47H9C.1 protein.
Length = 377
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 336 WFFPFLG-HMGISTSNGVIRDFAGPYFVSE 422
W PF+G H +S++NG + YFV++
Sbjct: 315 WTIPFIGQHFKVSSTNGTAGQYYVQYFVNQ 344
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,222,503
Number of Sequences: 27780
Number of extensions: 470512
Number of successful extensions: 1242
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1242
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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