Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_L14
         (716 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    25   0.81 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.4  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   4.3  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   5.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   7.6  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   7.6  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -1

Query: 437 MFRHRLFLI*ETQLPIHIFLLNPLKKLHWDLLWLIRQ 327
           + +H LFL+     PI  F   P+K L+   +  IR+
Sbjct: 115 LLKHNLFLLDNIVKPIIAFYYKPIKTLNGHEIKFIRK 151


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 491 RKNHLPSVGSFSETPYYAPGNMGHPVFDTKYA 586
           R +H P  G     P+ +  NMG+ V    YA
Sbjct: 66  RADHSPVFGKVEPVPHTSSFNMGYLVSPYSYA 97


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 474 TFWVNIERIIYQV 512
           T WVN ERI Y++
Sbjct: 160 TDWVNFERIYYKL 172


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -3

Query: 240 DAAVFMIFSILVNIA 196
           D  VF++ SILVNIA
Sbjct: 396 DYFVFLLCSILVNIA 410


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 193 RSDIY*N*KNHKYGCIRGRSNNMLGRNMVDA 285
           RS  + N ++    C R R+N++L +N  D+
Sbjct: 390 RSSTFRNNRDEYNVCFRPRNNSILIKNFNDS 420


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 96  PLPEXLARQXLLSSDSYNILLYYRHA 173
           PLP  +     + +D YN  LY+  A
Sbjct: 401 PLPSSVHSHSTIGNDYYNSPLYHTSA 426


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,177
Number of Sequences: 336
Number of extensions: 4049
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)