Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_L14
(716 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0405 - 17767303-17767665,17767815-17768039,17768115-177683... 219 1e-57
02_04_0096 + 19669428-19669525,19670770-19670818,19671041-196711... 80 2e-15
03_01_0535 + 4006284-4006418,4006483-4006599,4007363-4007587,400... 61 7e-10
02_05_0058 + 25478274-25478421,25478963-25479142,25479714-254800... 50 1e-06
06_01_0729 + 5367796-5368071,5368390-5368483,5368708-5368782,536... 50 2e-06
02_05_0060 + 25484349-25484496,25485514-25485705,25486614-254869... 43 2e-04
12_02_0453 + 19192060-19192301,19192477-19192559,19193246-191933... 31 0.69
04_03_0036 - 9950353-9950379,9950753-9950791,9951021-9951194,995... 31 1.2
03_05_1058 - 30014796-30014961,30015711-30016450,30016756-300168... 30 1.6
09_02_0384 - 8294914-8297817 29 4.9
05_03_0173 - 9210279-9210764,9210877-9211605,9213286-9213447 29 4.9
10_03_0007 - 6956215-6956223,6957082-6957300,6957874-6957978,695... 28 6.4
09_06_0316 + 22262652-22263872 28 6.4
09_06_0313 + 22240971-22242176 28 6.4
02_04_0123 + 19961904-19962096,19962836-19963029,19963334-199634... 28 6.4
02_02_0547 + 11399769-11399852,11399906-11400088,11400474-114005... 28 6.4
01_06_1752 + 39659914-39659942,39660195-39660306,39660348-396605... 28 6.4
10_07_0057 + 12460986-12461036,12461108-12461161,12461420-124614... 28 8.5
04_01_0279 + 3743025-3745169 28 8.5
01_07_0214 - 42055848-42056155,42056263-42056442,42056560-420570... 28 8.5
>07_03_0405 -
17767303-17767665,17767815-17768039,17768115-17768342,
17768607-17768621,17768622-17768810,17769106-17769213,
17769917-17770045
Length = 418
Score = 219 bits (536), Expect = 1e-57
Identities = 105/190 (55%), Positives = 135/190 (71%), Gaps = 7/190 (3%)
Frame = +2
Query: 119 PXLVKLGLIQHSVILPTCESIREQREAIFTKIEKIINTAASEGVQIICLE-----ETWSM 283
P ++++GLIQ+S+ +PT +Q++AI K++ +I+ A GV I+CL+ E W+M
Sbjct: 93 PRVIRVGLIQNSIAIPTTSHFADQKKAIMEKVKPMIDAAGDAGVNILCLQVSQLSEAWTM 152
Query: 284 PFFLCTREKEKWDEFAESATEGPSVIFLKDLARKYGLVIVSPILEKD-DVGTW-WNTAVV 457
PF CTREK +W EFAE +G S FL+ LA+KY +VIVSPILE+D + G WNTAVV
Sbjct: 153 PFAFCTREK-RWCEFAEPV-DGESTQFLQQLAKKYNMVIVSPILERDVNHGEIVWNTAVV 210
Query: 458 IDEEGNVLGKHRKNHLPSVGSFSETPYYAPGNMGHPVFDTKYAKIAVNICYGRHQALNWL 637
I GN++G HRKNH+P VG F+E+ YY GN GHPVF+T Y KI VNICYGRH LNWL
Sbjct: 211 IGNHGNIIGIHRKNHIPRVGDFNESTYYMEGNTGHPVFETAYGKIGVNICYGRHHPLNWL 270
Query: 638 MLGLNGAEIV 667
GLNGAEIV
Sbjct: 271 AFGLNGAEIV 280
>02_04_0096 +
19669428-19669525,19670770-19670818,19671041-19671132,
19671235-19671386,19671478-19671524,19671617-19671650,
19671769-19671935,19672070-19672166,19672239-19672408
Length = 301
Score = 79.8 bits (188), Expect = 2e-15
Identities = 45/151 (29%), Positives = 80/151 (52%)
Frame = +2
Query: 215 EKIINTAASEGVQIICLEETWSMPFFLCTREKEKWDEFAESATEGPSVIFLKDLARKYGL 394
E++I A +G I+ ++E + +F C ++ + + A+ P++I + LA++ +
Sbjct: 32 ERLIREAHKKGANIVLVQELFEGQYF-CQAQRLDFFQRAKPYKGNPTIIRFQKLAKELEV 90
Query: 395 VIVSPILEKDDVGTWWNTAVVIDEEGNVLGKHRKNHLPSVGSFSETPYYAPGNMGHPVFD 574
VI E+ + +N+ +ID +G LG +RK+H+P + E Y+ PG+ G F
Sbjct: 91 VIPVSFFEEAN-NAHYNSVAIIDADGTDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKAFK 149
Query: 575 TKYAKIAVNICYGRHQALNWLMLGLNGAEIV 667
TKYA I V IC+ + + L GAEI+
Sbjct: 150 TKYATIGVGICWDQWFPECARAMVLQGAEIL 180
>03_01_0535 +
4006284-4006418,4006483-4006599,4007363-4007587,
4008112-4008205,4008587-4008661,4009045-4009123,
4009385-4009400,4009441-4009584,4009822-4009904,
4010012-4010093
Length = 349
Score = 61.3 bits (142), Expect = 7e-10
Identities = 53/189 (28%), Positives = 82/189 (43%), Gaps = 10/189 (5%)
Frame = +2
Query: 131 KLGLIQHSVILPTCESIREQREAIFTKIEKIINTAASEGVQIICLEETWSMPFFLCTREK 310
K+ L Q SV +I REAI AA+ G +++ L E W+ P+
Sbjct: 47 KVALCQLSVTADKARNIARAREAI--------EAAAAGGAKLVLLPEIWNGPY-----SN 93
Query: 311 EKWDEFAESATEG----PSVIFLKDLARKYGLVIVSPILEKDDVGTWWNTAVVIDEEGNV 478
+ + E+AE G PS + ++AR + +V + + +NT V +G +
Sbjct: 94 DSFPEYAEDIEAGGDAAPSFSMMSEVARSLQITLVGGSISERSGNKLYNTCCVFGSDGEL 153
Query: 479 LGKHRKNHL-----PSVGSFSETPYYAPGNMGHPVFDTKYAKIAVNICYG-RHQALNWLM 640
GKHRK HL P +F E+ G V DT +I + ICY R Q L ++
Sbjct: 154 KGKHRKIHLFDIDIPGKITFKESKTLTAG-QDLTVVDTDVGRIGIGICYDIRFQELA-ML 211
Query: 641 LGLNGAEIV 667
GA ++
Sbjct: 212 YAARGAHLL 220
>02_05_0058 +
25478274-25478421,25478963-25479142,25479714-25480007,
25480261-25480564,25480672-25480751,25480765-25480934
Length = 391
Score = 50.4 bits (115), Expect = 1e-06
Identities = 51/171 (29%), Positives = 77/171 (45%), Gaps = 15/171 (8%)
Frame = +2
Query: 197 AIFTKIEKIINTAASEGVQIICLEETW------SMPFFLC-----TREKEKWDEFAESAT 343
A K EK++ AA G QI+ E + F L + KE + ++ +A
Sbjct: 47 ATLDKAEKLVAEAAGYGSQIVLFPEVFVGGYPHGSTFGLTIGNRSAKGKEDFHKYHAAAI 106
Query: 344 E--GPSVIFLKDLARKYGLVIVSPILEKDDVG-TWWNTAVVIDEEGNVLGKHRKNHLPSV 514
+ GP V L LA KY + +V ++E+ VG T +NT + D G LGKHRK +
Sbjct: 107 DVPGPEVTRLAALAGKYKIFLVMGVVER--VGYTLYNTVLFFDPLGKYLGKHRK----VM 160
Query: 515 GSFSETPYYAPGNMGH-PVFDTKYAKIAVNICYGRHQALNWLMLGLNGAEI 664
+ E ++ G+ PV+DT KI IC+ L + G +I
Sbjct: 161 PTGLERVFWGFGDGSTIPVYDTPIGKIGAVICWENRMPLLRTAMYAKGVQI 211
>06_01_0729 +
5367796-5368071,5368390-5368483,5368708-5368782,
5368919-5368997,5369155-5369170,5369260-5369346,
5369451-5369533,5369616-5369769
Length = 287
Score = 50.0 bits (114), Expect = 2e-06
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 5/136 (3%)
Frame = +2
Query: 218 KIINTAASEGVQIICLEETWSMPFFLCTREKEKWDEFAESATEGPSVIFLKDLARKYGLV 397
K+ A S+G + +E W+ P+ + T D ++ PSV L ++A + +
Sbjct: 5 KVAGGAPSDGG--VLFQEIWNCPYSMETLPSHGEDIDGGAS---PSVSMLSEVAARRRIT 59
Query: 398 IVSPILEKDDVGTWWNTAVVIDEEGNVLGKHRKNHL-----PSVGSFSETPYYAPGNMGH 562
IV + + G +NT VI +G + KHRK HL P +F E+ + G
Sbjct: 60 IVGGSIPERSSGRLFNTCCVIGPDGQIKAKHRKLHLFEIDIPGDITFRESDTFTAG-QEP 118
Query: 563 PVFDTKYAKIAVNICY 610
+ DT +I + IC+
Sbjct: 119 TIVDTDVGRIGIGICH 134
>02_05_0060 +
25484349-25484496,25485514-25485705,25486614-25486907,
25487140-25487421,25487571-25487743
Length = 362
Score = 43.2 bits (97), Expect = 2e-04
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Frame = +2
Query: 308 KEKWDEFAESATE--GPSVIFLKDLARKYGLVIVSPILEKDDVGTWWNTAVVIDEEGNVL 481
KE++ ++ +A E GP V L +A KY + +V ++E++ T + + + D G L
Sbjct: 99 KEEFRKYHAAAIEVPGPEVTRLAAMAGKYKVFLVMGVIEREGY-TLYCSVLFFDPLGRYL 157
Query: 482 GKHRKNHLPSVGSFSETPYYAPGNMGH-PVFDTKYAKIAVNICYGRHQALNWLMLGLNGA 658
GKHRK +P+ E + G+ PV+DT KI IC+ L L G
Sbjct: 158 GKHRKL-MPTA---LERIIWGFGDGSTIPVYDTPLGKIGALICWENKMPLLRTALYGKGI 213
Query: 659 EI 664
EI
Sbjct: 214 EI 215
>12_02_0453 +
19192060-19192301,19192477-19192559,19193246-19193328,
19193616-19193668,19194041-19194169,19194585-19194643,
19195317-19195429,19195571-19195663,19195810-19195912,
19196233-19196315,19196407-19196448
Length = 360
Score = 31.5 bits (68), Expect = 0.69
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = +2
Query: 440 WNTAVVIDEEGNVLGKHRKNHL-----PSVGSFSETPYYAPGNMGHPVFDTKYAKIAVNI 604
+NT V+ID+ G + +RK HL P + E+ + G+ V D+ + ++ + +
Sbjct: 176 YNTHVLIDDSGEIRSSYRKIHLFDVDVPGNMVYKESRFTTAGDTVVAV-DSPFGRLGLTV 234
Query: 605 CY 610
CY
Sbjct: 235 CY 236
>04_03_0036 -
9950353-9950379,9950753-9950791,9951021-9951194,
9951287-9951415,9951782-9952012,9952655-9952732,
9953035-9953055,9953790-9953855,9953935-9954015,
9954148-9954920,9955461-9955654,9956723-9956817,
9958190-9958219,9958334-9958453,9959185-9959262,
9959428-9959505,9960459-9960488,9960614-9960739,
9961239-9961379,9963416-9963532,9963619-9963670,
9963759-9963890,9964668-9964720,9964816-9964911,
9965255-9965260,9965416-9965561,9966494-9966629,
9966885-9967038,9968017-9968154,9968268-9968614
Length = 1295
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -3
Query: 321 SHFSFSLVHRKNGIDHVSSKHII*TPSDAAVF 226
S+ ++ ++H G+DH ++ + +PSDAA F
Sbjct: 2 SYAAYKMMHWPTGVDHCAAGFVTHSPSDAAAF 33
>03_05_1058 -
30014796-30014961,30015711-30016450,30016756-30016887,
30017509-30018021,30019208-30019582
Length = 641
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 227 NTAASEGVQIICLEETWSMPFFLCTREKEKWDEFA-ESATEGPSVIFL 367
N+ + EGV+I+CL+ S F T ++ D++ + E V+FL
Sbjct: 72 NSGSEEGVEIVCLQSEQSSSMFCSTIDQFSVDKYPFKDLREAVDVLFL 119
>09_02_0384 - 8294914-8297817
Length = 967
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 206 TKIEKIINTAASEGVQIICLEETWSMPFFLCTREKEKWDEFAESATE 346
+KI+K++ SE +I C+ E C + E W+ F SATE
Sbjct: 273 SKIQKVVFATRSE--EICCVMEADKRIKLECLQPDEAWELFKYSATE 317
>05_03_0173 - 9210279-9210764,9210877-9211605,9213286-9213447
Length = 458
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 236 ASEGVQIICLEETWSMP 286
+SE +QI CLE WSMP
Sbjct: 236 SSEAIQIRCLEGIWSMP 252
>10_03_0007 -
6956215-6956223,6957082-6957300,6957874-6957978,
6958062-6958175,6958342-6958467,6958583-6958697,
6958791-6958867,6958956-6959179,6959848-6959953,
6960065-6960163,6960282-6960467,6960611-6960613
Length = 460
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 173 ESIREQ--REAIFTKIEKIINTAASEGVQIICLEETW 277
E+ RE R F++ EKII+ ++ IICL+E W
Sbjct: 63 ENCRESQYRAYWFSRNEKIIDRLLADCSSIICLQEVW 99
>09_06_0316 + 22262652-22263872
Length = 406
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 437 MFRHRLFLI*ETQLPIHIFLLNPLKKLHWDLL 342
+ RHRL ++ E QLP+H LL L + DLL
Sbjct: 166 LLRHRLHIVGEVQLPVHHCLL-ALPGVRRDLL 196
>09_06_0313 + 22240971-22242176
Length = 401
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 437 MFRHRLFLI*ETQLPIHIFLLNPLKKLHWDLL 342
+ RHRL ++ E QLP+H LL L + DLL
Sbjct: 158 LLRHRLHIVGEVQLPVHHCLL-ALPGVRRDLL 188
>02_04_0123 +
19961904-19962096,19962836-19963029,19963334-19963465,
19963921-19964038,19964248-19964484,19964576-19964658,
19964777-19965004,19965394-19965470,19965590-19965626,
19965786-19965952,19966156-19966234,19966301-19966378,
19967459-19967575,19967999-19968379,19968453-19968590,
19968680-19968769,19968832-19968840
Length = 785
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 155 VILPTCESIREQREAIFTKIEKIINTAASEGVQIICLEETW 277
+I P C RE R+ + EKI+ + A G ++ L W
Sbjct: 435 LIHPACHPHREVRKLAYVATEKILASTAVLGQDLLLLFNNW 475
>02_02_0547 +
11399769-11399852,11399906-11400088,11400474-11400578,
11400690-11400773,11400938-11401053,11401158-11401259,
11401339-11401452,11401540-11401596,11401681-11401873,
11402261-11402335,11402425-11402460,11402509-11402574,
11402575-11402688
Length = 442
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Frame = +2
Query: 371 DLARKYGLVIVSPILEKDDVGTWWNTAVVIDEEGNVLGKHRKN-----HLPSVGSFSE 529
+L RK+GL I P L+ D TW T D+E + + + R HLP +F E
Sbjct: 228 ELVRKHGLDISQPGLQPDKGLTWQMTKRRGDQEVHKVTEERPGWCTDPHLPPCAAFVE 285
>01_06_1752 +
39659914-39659942,39660195-39660306,39660348-39660533,
39660918-39661022,39661147-39661230,39661416-39661531,
39661636-39661737,39661816-39661929,39662323-39662389,
39662457-39662510,39662899-39662973,39663057-39663092,
39663490-39663591
Length = 393
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +2
Query: 317 WDEFAESATEGPSVIFLKDLARKYGLVIVSPILEKDDVGTWWNTAVVIDEE 469
WDE S + ++K L RK+GL I P LE D TW T + D+E
Sbjct: 232 WDEDL-SVQHFNAEAYIK-LVRKHGLEISQPGLEPDKGLTWQMTKRLGDQE 280
>10_07_0057 +
12460986-12461036,12461108-12461161,12461420-12461482,
12461666-12461716,12461996-12462057,12462156-12462318,
12462829-12462939,12463029-12463166,12463248-12463322,
12463420-12463540,12464827-12464981,12465080-12465154,
12465270-12465473,12465670-12465786
Length = 479
Score = 27.9 bits (59), Expect = 8.5
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 5/103 (4%)
Frame = +2
Query: 176 SIREQREAIFTKI----EKIINTAAS-EGVQIICLEETWSMPFFLCTREKEKWDEFAESA 340
S R +R++I + + E +++T S EG+ C + + F R + E AE+
Sbjct: 356 SYRAERDSILSSLSCCAEAMVSTFNSMEGMT--CNKAEGGISVFPSVRLPPRAIEAAEAM 413
Query: 341 TEGPSVIFLKDLARKYGLVIVSPILEKDDVGTWWNTAVVIDEE 469
P V + L G+V+V + GTW ++ +E
Sbjct: 414 NTEPDVFYALRLLESTGIVVVPGSVFGQVPGTWHFRCTILPQE 456
>04_01_0279 + 3743025-3745169
Length = 714
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Frame = +2
Query: 416 EKDDVGTWWN------TAVVIDEEGNVLGKHRKNHLPSVGSFSET 532
EK +G+WWN + V+ DE ++ H +N L +V S S T
Sbjct: 396 EKAGLGSWWNRHVNAGSIVISDEVKELVFGHIQNMLRAVDSMSTT 440
>01_07_0214 -
42055848-42056155,42056263-42056442,42056560-42057077,
42059507-42060063
Length = 520
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 477 TLPSSSITTAVFHHVPTSSFSNIGDTITNPYFLAKSFKKITLGPSVADSANS 322
++PSS+ +F H TS G T NP LAK + + T+ +V D+ S
Sbjct: 160 SVPSSTQPNRLFVHSATSG----GATSNNPELLAKGYPQRTIFDNVHDAGLS 207
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,017,971
Number of Sequences: 37544
Number of extensions: 436636
Number of successful extensions: 1020
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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