Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_L14
(716 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical p... 214 5e-56
AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical... 42 4e-04
AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and... 42 4e-04
Z35604-6|CAA84681.1| 305|Caenorhabditis elegans Hypothetical pr... 37 0.013
AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical ... 29 2.5
U28409-4|AAC46590.2| 394|Caenorhabditis elegans Saposin-like pr... 28 5.8
>U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical
protein F13H8.7 protein.
Length = 387
Score = 214 bits (523), Expect = 5e-56
Identities = 96/185 (51%), Positives = 127/185 (68%), Gaps = 2/185 (1%)
Frame = +2
Query: 119 PXLVKLGLIQHSVILPTCESIREQREAIFTKIEKIINTAASEGVQIICLEETWSMPFFLC 298
P LV++ IQ+ + PT +S+ EQR+AI ++ +I AAS G +I L+E W+MPF C
Sbjct: 71 PRLVRVAAIQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEAWTMPFAFC 130
Query: 299 TREKEKWDEFAESATEGPSVIFLKDLARKYGLVIVSPILEKDDV--GTWWNTAVVIDEEG 472
TRE+ W EFAES GP+ FL LA K+ +VI+SPILE+D+ WNTAVVI G
Sbjct: 131 TRERLPWTEFAESVYTGPTTQFLSKLAVKHDIVIISPILERDEEKDDVIWNTAVVISHTG 190
Query: 473 NVLGKHRKNHLPSVGSFSETPYYAPGNMGHPVFDTKYAKIAVNICYGRHQALNWLMLGLN 652
V+G+ RKNH+P VG F+E+ YY +GHPVF+TKY +I +NICYGRH NW+M LN
Sbjct: 191 RVIGRSRKNHIPRVGDFNESTYYMESTLGHPVFETKYGRIGINICYGRHHPQNWMMYALN 250
Query: 653 GAEIV 667
GAEI+
Sbjct: 251 GAEII 255
>AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical
protein Y56A3A.13 protein.
Length = 440
Score = 41.9 bits (94), Expect = 4e-04
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 9/179 (5%)
Frame = +2
Query: 194 EAIFTKIEKIINTAASEGVQIICLEETWSMPFFLCTREKEKWDEFAESATEGPSVIFLKD 373
E F + +I A + +++ L E + F+ + E+ D AT+ + ++
Sbjct: 29 EKNFQAAKNMIERAGEKKCEMVFLPECFD---FIGLNKNEQID--LAMATDCEYMEKYRE 83
Query: 374 LARKYGLVI-VSPILEKD--DVGTWWNTAVVIDEEGNVLGKHRKNHL-----PSVGSFSE 529
LARK+ + + + + KD D WNT ++ID +G ++ K HL P E
Sbjct: 84 LARKHNIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAEYNKLHLFDLEIPGKVRLME 143
Query: 530 TPYYAPGNMGHPVFDTKYAKIAVNICYG-RHQALNWLMLGLNGAEIVSILRPLXPNRGI 703
+ + G P DT ++ ++ICY R L+ L GA+++S N G+
Sbjct: 144 SEFSKAGTEMIPPVDTPIGRLGLSICYDVRFPELS-LWNRKRGAQLLSFPSAFTLNTGL 201
>AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and
fragile histidinetriad fusion protein NitFhit protein.
Length = 440
Score = 41.9 bits (94), Expect = 4e-04
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 9/179 (5%)
Frame = +2
Query: 194 EAIFTKIEKIINTAASEGVQIICLEETWSMPFFLCTREKEKWDEFAESATEGPSVIFLKD 373
E F + +I A + +++ L E + F+ + E+ D AT+ + ++
Sbjct: 29 EKNFQAAKNMIERAGEKKCEMVFLPECFD---FIGLNKNEQID--LAMATDCEYMEKYRE 83
Query: 374 LARKYGLVI-VSPILEKD--DVGTWWNTAVVIDEEGNVLGKHRKNHL-----PSVGSFSE 529
LARK+ + + + + KD D WNT ++ID +G ++ K HL P E
Sbjct: 84 LARKHNIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAEYNKLHLFDLEIPGKVRLME 143
Query: 530 TPYYAPGNMGHPVFDTKYAKIAVNICYG-RHQALNWLMLGLNGAEIVSILRPLXPNRGI 703
+ + G P DT ++ ++ICY R L+ L GA+++S N G+
Sbjct: 144 SEFSKAGTEMIPPVDTPIGRLGLSICYDVRFPELS-LWNRKRGAQLLSFPSAFTLNTGL 201
>Z35604-6|CAA84681.1| 305|Caenorhabditis elegans Hypothetical
protein ZK1058.6 protein.
Length = 305
Score = 37.1 bits (82), Expect = 0.013
Identities = 51/187 (27%), Positives = 78/187 (41%), Gaps = 14/187 (7%)
Frame = +2
Query: 191 REAIFTKIEKIINTAASEGVQIICLEET-------W-SMPFFLCTREKEKWDEFA---ES 337
+ A K++K + AA G +++ E W S + TR E EF E+
Sbjct: 16 KPATLEKVKKNVEEAAGNGAELVLFPEAFIGGYPKWNSFGITMGTRTPEGRKEFKRYFEN 75
Query: 338 ATE--GPSVIFLKDLARKYGLVIVSPILEKDDVGTWWNTAVVIDEEGNVLGKHRKNHLPS 511
A E G ++ LA + + IV ++E++ T + + G LGKHRK LP+
Sbjct: 76 AIEENGEESKLIESLAAQNNIHIVIGVVERE-ASTLYCSVFFYSPSG-YLGKHRKL-LPT 132
Query: 512 VGSFSETPYYAPGNMGH-PVFDTKYAKIAVNICYGRHQALNWLMLGLNGAEIVSILRPLX 688
E + G+ PVF T KI IC+ + L + L EI L P
Sbjct: 133 A---LERCVWGQGDGSTMPVFSTSVGKIGSAICWENYMPL--YRMTLYSKEIQIYLAPTV 187
Query: 689 PNRGIIL 709
+R + L
Sbjct: 188 DDRDVWL 194
>AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical
protein Y45G5AM.2 protein.
Length = 1061
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 197 AIFTKIEKIINTAASEGVQIICLEETWSMPFFLCTREKEKWDEF 328
+I +I+KI NT +G++ L ++ ++ FLC EKE+ D +
Sbjct: 756 SIMERIKKIKNTDQLKGMRASNLRDSIAIVEFLCKFEKERRDGY 799
>U28409-4|AAC46590.2| 394|Caenorhabditis elegans Saposin-like
protein family protein11 protein.
Length = 394
Score = 28.3 bits (60), Expect = 5.8
Identities = 23/62 (37%), Positives = 29/62 (46%)
Frame = -3
Query: 531 VSLKLPTLGR*FFRCLPKTLPSSSITTAVFHHVPTSSFSNIGDTITNPYFLAKSFKKITL 352
V KLPT+ +PKTLP++ I V PT I TI P + K+ TL
Sbjct: 221 VPTKLPTVE--VPDTIPKTLPTTKIPDIVPITSPTVKIPQIIPTIKIPDIIPKNLS--TL 276
Query: 351 GP 346
GP
Sbjct: 277 GP 278
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,084,692
Number of Sequences: 27780
Number of extensions: 387425
Number of successful extensions: 907
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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