Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_L08
         (770 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   6.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   6.2  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    22   6.2  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    22   6.2  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   8.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.2  

>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 287 QKTLSTSARGYLWLETNAP 343
           QKTL+ +A    WL+  AP
Sbjct: 235 QKTLNVAAGIQYWLDEGAP 253


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 497 EYAPGLVDNVQSYASTAWSGL 559
           E APGLV  + + A  +WS L
Sbjct: 414 ELAPGLVGPLLTSALASWSPL 434


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 287 QKTLSTSARGYLWLETNAP 343
           QKTL+ +A    WL+  AP
Sbjct: 236 QKTLNVAAGIQYWLDEGAP 254


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 287 QKTLSTSARGYLWLETNAP 343
           QKTL+ +A    WL+  AP
Sbjct: 236 QKTLNVAAGIQYWLDEGAP 254


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 383 YMDDIFQQFVRSKP 342
           Y+DDIFQ++  + P
Sbjct: 405 YIDDIFQEYKATLP 418



 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 98  RIF*XRMTSTRRNPWLW 148
           RIF    T  R NPWL+
Sbjct: 501 RIFLAPKTDERGNPWLF 517


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 383 YMDDIFQQFVRSKP 342
           Y+DD+FQ+F  + P
Sbjct: 405 YIDDMFQEFKATLP 418


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 130  KKSLVVGQLCSAGQH 174
            KKSL  G+LCS   H
Sbjct: 1296 KKSLDFGKLCSLHHH 1310


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,709
Number of Sequences: 336
Number of extensions: 4240
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)