Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_L08
         (770 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC068479-1|AAH68479.1|  689|Homo sapiens hypothetical protein FL...    58   5e-08
AK074981-1|BAC11331.1|  486|Homo sapiens protein ( Homo sapiens ...    58   5e-08
AK000261-1|BAA91038.1|  431|Homo sapiens protein ( Homo sapiens ...    58   5e-08
AC013472-3|AAY14654.1|  431|Homo sapiens unknown protein.              58   5e-08

>BC068479-1|AAH68479.1|  689|Homo sapiens hypothetical protein
           FLJ20254 protein.
          Length = 689

 Score = 57.6 bits (133), Expect = 5e-08
 Identities = 31/88 (35%), Positives = 46/88 (52%)
 Frame = +2

Query: 131 RNPWLWASFVLLVSIAGLVAYDVSRAGGNFPKSTTGKLFKDLGILEHSQQAWQKTLSTSA 310
           R PW     +LLV   G + +D+ R+  +F  S TG+L +  G L  SQQA  K  S S 
Sbjct: 479 RLPWTRLLLLLLVFAVGFLCHDL-RSHSSFQASLTGRLLRSSGFLPASQQACAKLYSYSL 537

Query: 311 RGYLWLETNAPVYYAQTVEICHPYTQLS 394
           +GY WL    P++ +  + +  P  QL+
Sbjct: 538 QGYSWLGETLPLWGSHLLTVVRPSLQLA 565


>AK074981-1|BAC11331.1|  486|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90500 fis, clone NT2RP3004025. ).
          Length = 486

 Score = 57.6 bits (133), Expect = 5e-08
 Identities = 31/88 (35%), Positives = 46/88 (52%)
 Frame = +2

Query: 131 RNPWLWASFVLLVSIAGLVAYDVSRAGGNFPKSTTGKLFKDLGILEHSQQAWQKTLSTSA 310
           R PW     +LLV   G + +D+ R+  +F  S TG+L +  G L  SQQA  K  S S 
Sbjct: 276 RLPWTRLLLLLLVFAVGFLCHDL-RSHSSFQASLTGRLLRSSGFLPASQQACAKLYSYSL 334

Query: 311 RGYLWLETNAPVYYAQTVEICHPYTQLS 394
           +GY WL    P++ +  + +  P  QL+
Sbjct: 335 QGYSWLGETLPLWGSHLLTVVRPSLQLA 362


>AK000261-1|BAA91038.1|  431|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20254 fis, clone COLF6926. ).
          Length = 431

 Score = 57.6 bits (133), Expect = 5e-08
 Identities = 31/88 (35%), Positives = 46/88 (52%)
 Frame = +2

Query: 131 RNPWLWASFVLLVSIAGLVAYDVSRAGGNFPKSTTGKLFKDLGILEHSQQAWQKTLSTSA 310
           R PW     +LLV   G + +D+ R+  +F  S TG+L +  G L  SQQA  K  S S 
Sbjct: 221 RLPWTRLLLLLLVFAVGFLCHDL-RSHSSFQASLTGRLLRSSGFLPASQQACAKLYSYSL 279

Query: 311 RGYLWLETNAPVYYAQTVEICHPYTQLS 394
           +GY WL    P++ +  + +  P  QL+
Sbjct: 280 QGYSWLGETLPLWGSHLLTVVRPSLQLA 307


>AC013472-3|AAY14654.1|  431|Homo sapiens unknown protein.
          Length = 431

 Score = 57.6 bits (133), Expect = 5e-08
 Identities = 31/88 (35%), Positives = 46/88 (52%)
 Frame = +2

Query: 131 RNPWLWASFVLLVSIAGLVAYDVSRAGGNFPKSTTGKLFKDLGILEHSQQAWQKTLSTSA 310
           R PW     +LLV   G + +D+ R+  +F  S TG+L +  G L  SQQA  K  S S 
Sbjct: 221 RLPWTRLLLLLLVFAVGFLCHDL-RSHSSFQASLTGRLLRSSGFLPASQQACAKLYSYSL 279

Query: 311 RGYLWLETNAPVYYAQTVEICHPYTQLS 394
           +GY WL    P++ +  + +  P  QL+
Sbjct: 280 QGYSWLGETLPLWGSHLLTVVRPSLQLA 307


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,077,376
Number of Sequences: 237096
Number of extensions: 2431989
Number of successful extensions: 6039
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6039
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)