Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_L08
(770 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical pr... 34 0.13
AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein. 34 0.13
AF068718-3|AAO21430.1| 82|Caenorhabditis elegans Cystatin-like... 31 0.91
AL021466-1|CAA16282.1| 308|Caenorhabditis elegans Hypothetical ... 31 1.2
AL031632-1|CAA21004.1| 248|Caenorhabditis elegans Hypothetical ... 30 2.1
Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z70783-1|CAA94852.2| 765|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr... 28 8.5
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l... 28 8.5
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l... 28 8.5
AC024801-9|AAF59653.3| 791|Caenorhabditis elegans Hypothetical ... 28 8.5
>Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical
protein K08H10.1 protein.
Length = 733
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +2
Query: 392 SKDAFFIALKKAGILYGNVQDYVVEKTPVVIKTIEEYAPGLVDNVQSYASTAWSGLKKYS 571
+KD +KAG D V EK + + + ++ DNV++ AS A++ K +
Sbjct: 550 AKDKSKSLTEKAGDAISGAYDSVKEKASDIADSFKAHSTNSKDNVENKASDAYNSAKDKA 609
Query: 572 SDYYQITTD 598
SD + T D
Sbjct: 610 SDAWDKTKD 618
>AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein.
Length = 733
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +2
Query: 392 SKDAFFIALKKAGILYGNVQDYVVEKTPVVIKTIEEYAPGLVDNVQSYASTAWSGLKKYS 571
+KD +KAG D V EK + + + ++ DNV++ AS A++ K +
Sbjct: 550 AKDKSKSLTEKAGDAISGAYDSVKEKASDIADSFKAHSTNSKDNVENKASDAYNSAKDKA 609
Query: 572 SDYYQITTD 598
SD + T D
Sbjct: 610 SDAWDKTKD 618
>AF068718-3|AAO21430.1| 82|Caenorhabditis elegans Cystatin-like
protease inhibitorprotein 1, isoform b protein.
Length = 82
Score = 31.1 bits (67), Expect = 0.91
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +2
Query: 230 TTGKLFKDLGILEHSQQAWQKTLSTSARGYLWLETNAPVYYAQTVEICHPYTQLSKDAFF 409
T G + +D E+S +AW+ + + N P YYA +++C PY + ++D
Sbjct: 23 TGGSVEQDASQKEYSDKAWKAVKGINDQA----SNNGPYYYAP-IKVCDPYERGAEDRTA 77
Query: 410 IA 415
+A
Sbjct: 78 LA 79
>AL021466-1|CAA16282.1| 308|Caenorhabditis elegans Hypothetical
protein VF36H2L.1 protein.
Length = 308
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 284 WQKTLSTSARGYLWLETNAPVYYAQTVEICHPYTQLSKDAFFIALKKA 427
W +L S+ +L L T P + ++ +C +LS+ A+F+ LKKA
Sbjct: 42 WLVSLLFSSLAWLGLSTVLPDTFLLSLTVCIIAQELSRVAYFMLLKKA 89
>AL031632-1|CAA21004.1| 248|Caenorhabditis elegans Hypothetical
protein Y32B12B.1 protein.
Length = 248
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -1
Query: 143 TRDFF*CSSFXTRISLNQYFLYVAISEHGNLNGSKNSRHSPQQKS 9
T+ FF C+ + + + V I E+GN NG K +P+ K+
Sbjct: 85 TKTFFFCNLVISNLIAMPVYQSVVIEENGNRNGEKTLYITPKSKN 129
>Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical
protein T03F6.2 protein.
Length = 510
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 146 WASFVLLVSIAGLVAYDVSRAGGNFPK---STTGKLFKDLGILEHSQQ 280
W+SF S A L YD+++A F K F+D+G E ++Q
Sbjct: 178 WSSFSTTRSFAWLDHYDITQASNRFESRQIDQENKKFRDVGKQERNEQ 225
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 424 SWYSVWKRPRLCGGENACRY*DH*RVCSWSCRQRSELCIYG 546
SW V + RLC E +CR+ R + CR + + C G
Sbjct: 14 SWKEVHGQLRLCEAEGSCRHCADSRYSYYRCRMQDD-CFIG 53
>Z70783-1|CAA94852.2| 765|Caenorhabditis elegans Hypothetical
protein ZK856.1 protein.
Length = 765
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 224 KSTTGKLFKDLGILEHSQQAWQKTLSTSARGYLWLETNAP 343
K G L +LG+LE+ A +K R +LE N+P
Sbjct: 200 KKICGNLLNELGVLEYMVYADKKLEEEQQRAKRYLEMNSP 239
>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
protein B0457.1b protein.
Length = 1012
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +2
Query: 281 AWQKTLSTSARGYLW-LETNAPVYYAQTVEICHPYTQLSKDAFFIALKKAGILYGNVQDY 457
A +K + SA+G + E+N V A TVEI H S+ +I A + G D
Sbjct: 340 AAEKAMVASAKGMMTSAESNVIVQPAITVEISHKIKMSSQPTDYILFPSAALWNGQNVDN 399
Query: 458 VVEKTPVVIK 487
V ++K
Sbjct: 400 VNIPRDAILK 409
>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
protein B0457.1a protein.
Length = 1014
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +2
Query: 281 AWQKTLSTSARGYLW-LETNAPVYYAQTVEICHPYTQLSKDAFFIALKKAGILYGNVQDY 457
A +K + SA+G + E+N V A TVEI H S+ +I A + G D
Sbjct: 342 AAEKAMVASAKGMMTSAESNVIVQPAITVEISHKIKMSSQPTDYILFPSAALWNGQNVDN 401
Query: 458 VVEKTPVVIK 487
V ++K
Sbjct: 402 VNIPRDAILK 411
>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
protein LAT-1B protein.
Length = 1012
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +2
Query: 281 AWQKTLSTSARGYLW-LETNAPVYYAQTVEICHPYTQLSKDAFFIALKKAGILYGNVQDY 457
A +K + SA+G + E+N V A TVEI H S+ +I A + G D
Sbjct: 340 AAEKAMVASAKGMMTSAESNVIVQPAITVEISHKIKMSSQPTDYILFPSAALWNGQNVDN 399
Query: 458 VVEKTPVVIK 487
V ++K
Sbjct: 400 VNIPRDAILK 409
>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
protein LAT-1A protein.
Length = 1014
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +2
Query: 281 AWQKTLSTSARGYLW-LETNAPVYYAQTVEICHPYTQLSKDAFFIALKKAGILYGNVQDY 457
A +K + SA+G + E+N V A TVEI H S+ +I A + G D
Sbjct: 342 AAEKAMVASAKGMMTSAESNVIVQPAITVEISHKIKMSSQPTDYILFPSAALWNGQNVDN 401
Query: 458 VVEKTPVVIK 487
V ++K
Sbjct: 402 VNIPRDAILK 411
>AC024801-9|AAF59653.3| 791|Caenorhabditis elegans Hypothetical
protein Y50D7A.1 protein.
Length = 791
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -2
Query: 574 ARVLFESAP--GRRCIALNVVYKTRSILFNGLNNDRR 470
+RV+ SAP C A V + T+ ILF G +N RR
Sbjct: 183 SRVIISSAPYPSAMCYASLVTWGTQLILFGGNDNRRR 219
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,947,906
Number of Sequences: 27780
Number of extensions: 381956
Number of successful extensions: 913
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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