Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_L05
(662 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0049 + 19238794-19239003,19239359-19239505,19239595-192397... 136 1e-32
04_03_0824 + 20086639-20087263,20087282-20087463,20087569-200877... 132 2e-31
09_03_0147 + 12763526-12763815,12763938-12764067,12764185-127644... 43 3e-04
05_01_0243 - 1806770-1806832,1806942-1807061,1807275-1807457,180... 40 0.002
06_01_0414 + 2948868-2948998,2949136-2949202,2949442-2949531,295... 39 0.003
01_06_0271 - 28055367-28055402,28055503-28055622,28055710-280558... 38 0.005
08_02_0851 - 21866088-21866210,21866311-21866413,21866531-218667... 38 0.009
01_06_0120 + 26622285-26622433,26623156-26623219,26623310-266233... 33 0.27
06_03_0983 - 26559772-26559915,26560149-26560251,26560335-265605... 32 0.35
02_01_0577 + 4280590-4281225,4281749-4282102,4282214-4282412,428... 31 0.82
10_01_0266 + 2816391-2818898,2818934-2819162,2819369-2819444,281... 30 1.4
02_05_0403 - 28696043-28696153,28696245-28696347,28696443-286965... 30 1.9
05_07_0175 - 28164252-28164529,28165381-28166560 29 3.3
03_01_0369 - 2863159-2863491,2864149-2864214,2865045-2865140,286... 29 4.4
11_06_0189 - 21039217-21039348,21039480-21039738,21039841-210400... 28 5.8
06_03_1475 - 30391555-30391890,30391982-30392233,30392358-303926... 28 5.8
04_04_1568 - 34475707-34476822,34476894-34477083,34477330-344774... 28 5.8
03_01_0155 - 1239184-1239491,1240414-1240812,1241017-1241380 28 5.8
>02_04_0049 +
19238794-19239003,19239359-19239505,19239595-19239750,
19239870-19239992,19240073-19240241,19240700-19240782,
19240917-19241018,19241104-19241192,19241317-19241407,
19241734-19241847,19242371-19242447,19242534-19242612,
19242710-19242778,19243022-19243197,19243309-19243365,
19243460-19243550,19243644-19243742,19243878-19244063
Length = 705
Score = 136 bits (329), Expect = 1e-32
Identities = 68/158 (43%), Positives = 98/158 (62%), Gaps = 7/158 (4%)
Frame = +1
Query: 199 EYEKAQQRSLNDPEGFWGEVGSELEWTKPWD------RVLDDSNAPFT-KWWVGGEMSVC 357
+Y+K +RS+NDP GFW E+ W + W+ LD + P W+ GG+ ++C
Sbjct: 70 KYQKMYERSINDPAGFWSEIADAFYWKEKWNPSEVCSENLDVTKGPVQISWFKGGKTNIC 129
Query: 358 YNAVDRHVVNGRGEQFALVHDSPLTDTVRKISYNELKDQVSRLAGKLTTLGVSKGARVLI 537
YNAVDR+V G G++ A+ + K++Y+EL D+V +LA L ++GV KG V+I
Sbjct: 130 YNAVDRNVEAGNGDKIAMYWEGNEPGQDGKLTYSELLDRVCQLANYLKSVGVGKGDAVII 189
Query: 538 YMPLVPEAIIAMLATNRIGAIHSVVFGGFAARELXTRI 651
Y+P++ E IAMLA RIGA+HSVVF GF+A L RI
Sbjct: 190 YLPMLLELPIAMLACARIGAVHSVVFAGFSADSLAQRI 227
>04_03_0824 +
20086639-20087263,20087282-20087463,20087569-20087724,
20087867-20087989,20088079-20088247,20088384-20088466,
20088641-20088742,20089246-20089359,20089735-20089811,
20089884-20089962,20090060-20090128,20090235-20090410,
20090460-20090561,20090678-20090768,20090878-20090976,
20091141-20091326
Length = 810
Score = 132 bits (319), Expect = 2e-31
Identities = 68/158 (43%), Positives = 99/158 (62%), Gaps = 7/158 (4%)
Frame = +1
Query: 199 EYEKAQQRSLNDPEGFWGEVGSELEWTKPW--DRV----LDDSNAPFT-KWWVGGEMSVC 357
+Y++ +RS++DP GFW E+ W W D V LD + P +W+ GG+ ++C
Sbjct: 220 QYQEMYRRSIDDPAGFWSEIAETFYWKHKWNPDEVCTENLDVTKGPIKIEWFKGGKTNIC 279
Query: 358 YNAVDRHVVNGRGEQFALVHDSPLTDTVRKISYNELKDQVSRLAGKLTTLGVSKGARVLI 537
YNAVDR+V G GE+ A+ + K++Y+EL ++V +LA L ++GV KG V+I
Sbjct: 280 YNAVDRNVEAGDGEKIAMYWEGNEPGQDAKLTYSELLNKVCQLANYLKSVGVGKGDAVVI 339
Query: 538 YMPLVPEAIIAMLATNRIGAIHSVVFGGFAARELXTRI 651
Y+P++ E IAMLA RIGA+HSVVF GF+A L RI
Sbjct: 340 YLPMLMELPIAMLACARIGAVHSVVFAGFSADALAQRI 377
>09_03_0147 +
12763526-12763815,12763938-12764067,12764185-12764435,
12764546-12764750,12764878-12764918,12765006-12765131,
12765429-12765502,12765671-12765891,12766251-12766345,
12766463-12766679,12766781-12766906,12766988-12767086,
12767171-12767380,12767496-12767606
Length = 731
Score = 42.7 bits (96), Expect = 3e-04
Identities = 33/148 (22%), Positives = 68/148 (45%), Gaps = 4/148 (2%)
Frame = +1
Query: 223 SLNDPEGFWGEVGSELEWTKPWDR--VLDDSNA-PFTKWWVGGEMSVCYNAVDRHVVNGR 393
S+ +PE +W V E+ T + +L +++A P +W G ++ N +
Sbjct: 135 SIENPEAYWKMVFEEMGITFSVEPSCILRENDAYPGGEWLPGAVLNAAANCLTAKPGRSS 194
Query: 394 GEQFALVHDSPL-TDTVRKISYNELKDQVSRLAGKLTTLGVSKGARVLIYMPLVPEAIIA 570
+ + D ++ + ++ EL+ +V +A L L ++KG+ + I MP+ A++
Sbjct: 195 DDVAIVWRDEGKDSEPLNFVTLEELRKKVCLVANALDALNLAKGSAIAIDMPMNVNAVVI 254
Query: 571 MLATNRIGAIHSVVFGGFAARELXTRIE 654
LA G + + FAA + R++
Sbjct: 255 YLAIVLAGYVVVSIADSFAAPAISMRLK 282
>05_01_0243 -
1806770-1806832,1806942-1807061,1807275-1807457,
1807554-1807693,1807768-1808010,1808664-1808781,
1808902-1808977,1809054-1809120,1809201-1809288,
1809381-1809491,1809632-1809799,1809946-1810040,
1810123-1810162,1810242-1810318,1810607-1810655,
1810756-1810812,1810959-1811048,1811160-1811223,
1812085-1812245
Length = 669
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = +1
Query: 451 SYNELKDQVSRLAGKLTTLGVSKGARVLIYMPLVPEAIIAMLATNRIGAIHSVVFGGFAA 630
SY E+ ++V ++ L LGV G+R+ IY P+ I+AM A N I ++ A
Sbjct: 83 SYREVYEEVLQVGSALQQLGVKPGSRIGIYGSNCPQWIVAMQACNGYSLICVPLYDTLGA 142
Query: 631 RELXTRIEHA 660
+ I+HA
Sbjct: 143 GAVDFIIDHA 152
>06_01_0414 +
2948868-2948998,2949136-2949202,2949442-2949531,
2950509-2950565,2950684-2950732,2950934-2951010,
2952776-2952815,2952909-2953003,2953174-2953341,
2953634-2953721,2954275-2954341,2954571-2954646,
2954759-2954876,2954988-2955233,2955296-2955471,
2956056-2956238,2956331-2956450,2956586-2956621
Length = 627
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/71 (32%), Positives = 36/71 (50%)
Frame = +1
Query: 448 ISYNELKDQVSRLAGKLTTLGVSKGARVLIYMPLVPEAIIAMLATNRIGAIHSVVFGGFA 627
++Y E+ D V +LA ++ G+SKG IY PE II+M A N +G ++
Sbjct: 73 MTYKEVYDVVMKLAASISKSGISKGESCGIYGANCPEWIISMEACNALGVSCVPLYDSLG 132
Query: 628 ARELXTRIEHA 660
A + + HA
Sbjct: 133 AGAVEFIVCHA 143
>01_06_0271 -
28055367-28055402,28055503-28055622,28055710-28055892,
28056006-28056145,28056347-28056595,28056706-28056823,
28056924-28056999,28057096-28057162,28057282-28057369,
28057506-28057616,28058127-28058221,28058305-28058344,
28058736-28058812,28058978-28059026,28059464-28059520,
28059624-28059713,28059833-28059896,28060076-28060245
Length = 609
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +1
Query: 448 ISYNELKDQVSRLAGKLTTLGVSKGARVLIYMPLVPEAIIAMLATNRIG 594
I+Y E D V ++ + +LGV KG R IY PE +I+M A N G
Sbjct: 85 ITYKEAYDTVIKVGASIRSLGVGKGGRCGIYGANCPEWVISMQACNAHG 133
>08_02_0851 -
21866088-21866210,21866311-21866413,21866531-21866744,
21866877-21867075,21867171-21868151
Length = 539
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/55 (30%), Positives = 34/55 (61%)
Frame = +1
Query: 436 TVRKISYNELKDQVSRLAGKLTTLGVSKGARVLIYMPLVPEAIIAMLATNRIGAI 600
T +S+ ++ R+A L+++GV G+ V++ +P E +A LA++R+GA+
Sbjct: 47 TGETLSFGDVDALSRRVAAGLSSIGVCHGSTVMLLLPNSVEFAVAFLASSRLGAV 101
>01_06_0120 +
26622285-26622433,26623156-26623219,26623310-26623399,
26623588-26623644,26623832-26623880,26624320-26624396,
26624918-26624957,26625037-26625131,26625525-26625689,
26625777-26625887,26625971-26626058,26626715-26626781,
26626955-26627063,26627155-26627272,26628345-26628590,
26628956-26629095,26629262-26629444,26629560-26629679,
26629932-26629967
Length = 667
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 451 SYNELKDQVSRLAGKLTTLGVSKGARVLIYMPLVPEAIIAMLATNRIG 594
+Y E+ D +++ + + G++KG+R IY PE II M A N G
Sbjct: 79 TYKEVFDLSTKIGNSIRSRGLAKGSRCGIYGANCPEWIITMEACNAHG 126
>06_03_0983 -
26559772-26559915,26560149-26560251,26560335-26560548,
26563352-26563550,26564509-26564862,26565430-26566086
Length = 556
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +1
Query: 451 SYNELKDQVSRLAGKLTTLGVSKGARVLIYMPLVPEAIIAMLATNRIGA 597
SY E+++ R A L LGV KG V+ + PE L R+GA
Sbjct: 58 SYGEVEELSRRAAAGLRRLGVGKGDVVMSLLRNCPEFAFTFLGAARLGA 106
>02_01_0577 +
4280590-4281225,4281749-4282102,4282214-4282412,
4284991-4285204,4285299-4285401,4285481-4285639
Length = 554
Score = 31.1 bits (67), Expect = 0.82
Identities = 20/75 (26%), Positives = 32/75 (42%)
Frame = +1
Query: 436 TVRKISYNELKDQVSRLAGKLTTLGVSKGARVLIYMPLVPEAIIAMLATNRIGAIHSVVF 615
T +Y E++ R A L +GV KG V+ + PE + L R+GA +
Sbjct: 49 TGESYTYAEVESASRRAAAGLRRMGVGKGDVVMSLLRNCPEFAFSFLGAARLGAATTTAN 108
Query: 616 GGFAARELXTRIEHA 660
+ E+ + E A
Sbjct: 109 PFYTPHEVHRQAEAA 123
>10_01_0266 +
2816391-2818898,2818934-2819162,2819369-2819444,
2819776-2819830,2822042-2822110,2823077-2823321,
2824029-2824065
Length = 1072
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 523 PPYSLPTLSAFQPDARPDLLAHCKRF 446
P ++ L+A PDA PDLLA C+ F
Sbjct: 124 PTFASLLLAALLPDATPDLLAFCEGF 149
>02_05_0403 -
28696043-28696153,28696245-28696347,28696443-28696510,
28696582-28696727,28698038-28699124
Length = 504
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 436 TVRKISYNELKDQVSRLAGKLTTLGVSKGARVLIYMPLVPEAIIAMLATNRIGAI 600
T R ++ E + R A L LGV G RV++ + E +A A + +GA+
Sbjct: 65 TGRTYTFAETRLLCRRAAAALHRLGVGHGDRVMVLLQNCVEFAVAFFAASFLGAV 119
>05_07_0175 - 28164252-28164529,28165381-28166560
Length = 485
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 343 EMSVCYNAVDRHVVNGRGEQFALVHDSPLTDTVRK 447
E+S+C NA R++V RG+ ++ + P + R+
Sbjct: 248 ELSLCRNAAARYLVESRGQLLMVIRERPAYNQSRE 282
>03_01_0369 -
2863159-2863491,2864149-2864214,2865045-2865140,
2865530-2865632,2865771-2865838,2866570-2866712,
2867050-2867242,2867602-2867640,2867742-2867807,
2868617-2869651
Length = 713
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 442 RKISYNELKDQVSRLAGKLTT-LGVSKGARVLIYMPLVPEAIIAMLATNRIGAIHSVVFG 618
R +++ EL+ V A L++ GV G VL+ P + A +GA+ + V
Sbjct: 59 RALTFAELRSAVLSTAVALSSRAGVRPGDAVLLLAPNCVLYPVCFFAVTALGAVGTTVNP 118
Query: 619 GFAARELXTRIEHA 660
+ RE+ ++ A
Sbjct: 119 DYTPREIAKQVSDA 132
>11_06_0189 -
21039217-21039348,21039480-21039738,21039841-21040004,
21040371-21040533,21040615-21042137
Length = 746
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 106 SKFESSISELKKXXFVSAADIECYNVCGTTPEYEKAQQRSLNDPEGFWGEVG 261
SKF + + + SAADIE N+CGT+ + P F VG
Sbjct: 11 SKFGAFVDKNSGASSSSAADIELQNMCGTSVARTASLSTGRASPSQFAPTVG 62
>06_03_1475 -
30391555-30391890,30391982-30392233,30392358-30392619,
30393232-30393320,30393408-30393592,30393673-30393781,
30393886-30393942,30394047-30394196
Length = 479
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 244 FWGEVGSELEWTKPWDRVLDDSNAPFTKWWVGGEMSVCYN 363
F+ + EL KP + L + F WW G +++ YN
Sbjct: 219 FYAAIKDELAHIKPLAKFLTFKSIVFLTWWQGVVIALLYN 258
>04_04_1568 -
34475707-34476822,34476894-34477083,34477330-34477464,
34477571-34477668,34477789-34477979,34478784-34479286,
34480169-34481568,34481655-34481855
Length = 1277
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 433 DTVRKISYNELKDQVSRLAGKL-TTLGVSKGARVLIYMPLVPEAIIAMLATNRIGAIHSV 609
DTV ++++ + RLA L ++LG+S+G V + +P VP A GA+ +
Sbjct: 37 DTV--FTWSQTHRRCLRLASALVSSLGISRGDVVSVLLPNVPAMYEMHFAVPMSGAVLNS 94
Query: 610 VFGGFAARELXTRIEHA 660
+ AR + + H+
Sbjct: 95 INTRLDARTVSVLLRHS 111
>03_01_0155 - 1239184-1239491,1240414-1240812,1241017-1241380
Length = 356
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3
Query: 363 RGGPTRGQWKRR 398
RGGP RG WKRR
Sbjct: 104 RGGPMRGDWKRR 115
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,187,785
Number of Sequences: 37544
Number of extensions: 431939
Number of successful extensions: 1173
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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