Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_L04
         (306 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138824-1|ABA86430.1|  832|Drosophila melanogaster CG3615 protein.    26   7.9  
BT006028-1|AAO85562.1|  845|Drosophila melanogaster RE14003p pro...    26   7.9  
AY050233-1|AAK84932.1|  363|Drosophila melanogaster SD01812p pro...    26   7.9  
AE013599-2246|AAF58018.1|  845|Drosophila melanogaster CG3615-PA...    26   7.9  

>DQ138824-1|ABA86430.1|  832|Drosophila melanogaster CG3615 protein.
          Length = 832

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 125 LNYSVRQTNRAHGEQSVTXRAATTHWRPR 39
           LN   RQ  ++  +++   R  T+HW PR
Sbjct: 776 LNQQKRQARQSRIDEAEDERPGTSHWPPR 804


>BT006028-1|AAO85562.1|  845|Drosophila melanogaster RE14003p
           protein.
          Length = 845

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 125 LNYSVRQTNRAHGEQSVTXRAATTHWRPR 39
           LN   RQ  ++  +++   R  T+HW PR
Sbjct: 783 LNQQKRQARQSRIDEAEDERPGTSHWPPR 811


>AY050233-1|AAK84932.1|  363|Drosophila melanogaster SD01812p
           protein.
          Length = 363

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 125 LNYSVRQTNRAHGEQSVTXRAATTHWRPR 39
           LN   RQ  ++  +++   R  T+HW PR
Sbjct: 301 LNQQKRQARQSRIDEAEDERPGTSHWPPR 329


>AE013599-2246|AAF58018.1|  845|Drosophila melanogaster CG3615-PA
           protein.
          Length = 845

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 125 LNYSVRQTNRAHGEQSVTXRAATTHWRPR 39
           LN   RQ  ++  +++   R  T+HW PR
Sbjct: 783 LNQQKRQARQSRIDEAEDERPGTSHWPPR 811


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,478,357
Number of Sequences: 53049
Number of extensions: 127504
Number of successful extensions: 237
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 568694034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)