Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_L03
(492 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15; ... 86 5e-16
UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative; ... 60 3e-08
UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative; ... 58 8e-08
UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;... 55 7e-07
UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14; ... 52 5e-06
UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1; A... 45 0.001
UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma j... 40 0.023
UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3; Eimer... 39 0.070
UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11... 36 0.37
UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;... 36 0.65
UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.65
UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta; n... 36 0.65
UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putati... 35 1.1
UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia lam... 33 2.6
UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;... 33 4.6
UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha; ... 33 4.6
>UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Drosophila melanogaster (Fruit fly)
Length = 112
Score = 85.8 bits (203), Expect = 5e-16
Identities = 43/89 (48%), Positives = 46/89 (51%)
Frame = +1
Query: 121 TGAQISTILXXXXXXXXPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXX 300
TG +I+TIL PYWPGLFAKALEGINV+DLITNIGSGV
Sbjct: 24 TGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAA 83
Query: 301 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 387
SDDDMGFGLFD
Sbjct: 84 PAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative;
n=2; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 106
Score = 60.1 bits (139), Expect = 3e-08
Identities = 30/44 (68%), Positives = 32/44 (72%)
Frame = +1
Query: 121 TGAQISTILXXXXXXXXPYWPGLFAKALEGINVRDLITNIGSGV 252
T +ISTI PYWPGLF KALEGINV+DLITNIGSGV
Sbjct: 34 TDEKISTI--QANVDIEPYWPGLFTKALEGINVKDLITNIGSGV 75
>UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative;
n=1; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 58.4 bits (135), Expect = 8e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 172 PYWPGLFAKALEGINVRDLITNIGSGV 252
PYWP LFAKALEGINV+DLITNIGSGV
Sbjct: 12 PYWPALFAKALEGINVKDLITNIGSGV 38
>UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;
Eukaryota|Rep: 60S acidic ribosomal protein P1 - Homo
sapiens (Human)
Length = 114
Score = 55.2 bits (127), Expect = 7e-07
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = +1
Query: 121 TGAQISTILXXXXXXXXPYWPGLFAKALEGINVRDLITNIGSG--VXXXXXXXXXXXXXX 294
T +I+ ++ P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 24 TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPS 83
Query: 295 XXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 387
SDDDMGFGLFD
Sbjct: 84 TAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 54.0 bits (124), Expect = 2e-06
Identities = 28/42 (66%), Positives = 30/42 (71%)
Frame = +1
Query: 121 TGAQISTILXXXXXXXXPYWPGLFAKALEGINVRDLITNIGS 246
T +ISTIL PYW LFAKALEGINV+DLITNIGS
Sbjct: 49 TDEKISTILKAANVE--PYWRALFAKALEGINVKDLITNIGS 88
>UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14;
Dikarya|Rep: 60S acidic ribosomal protein P1 -
Cladosporium herbarum (Davidiella tassiana)
Length = 110
Score = 52.4 bits (120), Expect = 5e-06
Identities = 28/72 (38%), Positives = 32/72 (44%)
Frame = +1
Query: 172 PYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 351
P W LFAKALEG +V+DL+ N+GSG
Sbjct: 41 PIWTSLFAKALEGKDVKDLLLNVGSG--GGAAPAAGGAAAGGAAAVLDAPAEEKAEEEKE 98
Query: 352 XSDDDMGFGLFD 387
SDDDMGFGLFD
Sbjct: 99 ESDDDMGFGLFD 110
>UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1;
Arabidopsis thaliana|Rep: 60s acidic ribosomal protein
P1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 44.8 bits (101), Expect = 0.001
Identities = 26/89 (29%), Positives = 32/89 (35%)
Frame = +1
Query: 121 TGAQISTILXXXXXXXXPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXX 300
T IS ++ YWP LFAK E N+ DLI N+G+G
Sbjct: 23 TAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIMNVGAGGCGVARPVTTAAPTASQ 82
Query: 301 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 387
S+DDM GLFD
Sbjct: 83 SVSIPEEKKNEMEVIKEESEDDMIIGLFD 111
>UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09468 protein - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 40.3 bits (90), Expect = 0.023
Identities = 28/94 (29%), Positives = 36/94 (38%), Gaps = 5/94 (5%)
Frame = +1
Query: 121 TGAQISTILXXXXXXXXP-YWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXX 297
T +I+TIL Y P LFA +L G NV+DL+ ++GS
Sbjct: 23 TADKINTILKAANIKFVESYLPNLFATSLNGKNVKDLLMSMGSPAPSAAVTSAVPTAASA 82
Query: 298 XXXXXXXXXXXXXXXXXXXSDDD----MGFGLFD 387
SDDD +GFGLFD
Sbjct: 83 TSAAAEKPKEAVKEEKKVVSDDDSDESIGFGLFD 116
>UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3;
Eimeriorina|Rep: Acidic ribosomal protein P1 -
Cryptosporidium hominis
Length = 124
Score = 38.7 bits (86), Expect = 0.070
Identities = 22/91 (24%), Positives = 31/91 (34%), Gaps = 2/91 (2%)
Frame = +1
Query: 121 TGAQISTILXXXXXXXXPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXX 300
T I I+ PY+PGLFA+AL NV D++ G+
Sbjct: 34 TSENIKKIISAAGGSVEPYFPGLFAQALSTTNVSDIVAGCGAASVAVPVAGGAGAGAGAA 93
Query: 301 XXXXXXXXXXXXXXXXXXSDD--DMGFGLFD 387
++ D+GF LFD
Sbjct: 94 QDSGASAAADDKKKKEEEEEEEGDLGFSLFD 124
>UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P1-A -
Candida albicans (Yeast)
Length = 106
Score = 36.3 bits (80), Expect = 0.37
Identities = 21/70 (30%), Positives = 26/70 (37%)
Frame = +1
Query: 178 WPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 357
W LFAKALEG ++++ N + S
Sbjct: 41 WADLFAKALEGKDLKEFFFNFSAAPAAAAAGGAAGGGAAAEEAAEEEKEEEAKEE----S 96
Query: 358 DDDMGFGLFD 387
DDDMGFGLFD
Sbjct: 97 DDDMGFGLFD 106
>UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P1 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 35.5 bits (78), Expect = 0.65
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +1
Query: 121 TGAQISTILXXXXXXXXPYWPGLFAKALEGINVRDLITNIGS 246
T I+T+L +WP + AKAL N+ DLI + GS
Sbjct: 27 TAEHINTVLHHANIKVEGFWPIIMAKALTNANIEDLIMDAGS 68
>UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 114
Score = 35.5 bits (78), Expect = 0.65
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +1
Query: 172 PYWPGLFAKALEGINVRDLITNIGS 246
P W LFAKALEG +V+D++T + S
Sbjct: 42 PIWTTLFAKALEGKDVKDILTEVAS 66
>UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta;
n=21; Ascomycota|Rep: 60S acidic ribosomal protein
P1-beta - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 35.5 bits (78), Expect = 0.65
Identities = 21/89 (23%), Positives = 32/89 (35%)
Frame = +1
Query: 121 TGAQISTILXXXXXXXXPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXX 300
T + TI W ++AKALEG +++++++ +
Sbjct: 21 TSDNLLTITKAAGANVDNVWADVYAKALEGKDLKEILSGFHNA---GPVAGAGAASGAAA 77
Query: 301 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 387
SDDDMGFGLFD
Sbjct: 78 AGGDAAAEEEKEEEAAEESDDDMGFGLFD 106
>UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein P1,
putative - Theileria parva
Length = 117
Score = 34.7 bits (76), Expect = 1.1
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = +1
Query: 172 PYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 351
P+ P LFA+AL+G ++ L++ +GSG
Sbjct: 51 PFTPMLFARALKGKDLGSLLSAVGSG-----AAAAPAAASASSAAAPEESAKKEEKKEEE 105
Query: 352 XSDDDMGFGLFD 387
D+DMGF LFD
Sbjct: 106 EEDEDMGFSLFD 117
>UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia
lamblia ATCC 50803|Rep: GLP_480_102976_103332 - Giardia
lamblia ATCC 50803
Length = 118
Score = 33.5 bits (73), Expect = 2.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +1
Query: 121 TGAQISTILXXXXXXXXPYWPGLFAKALEGINVRDLITNIGS 246
T A + +I W LFA LEG NV++L+T +GS
Sbjct: 23 TAANLKSICDAAGVKVDSIWFTLFANYLEGKNVKELLTTLGS 64
>UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;
n=8; Eukaryota|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 108
Score = 32.7 bits (71), Expect = 4.6
Identities = 18/66 (27%), Positives = 24/66 (36%)
Frame = +1
Query: 190 FAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDM 369
FA AL +NV +++ +I G +DDDM
Sbjct: 45 FANALAAVNVNEVLGSISFG--GAAAGGAAAPAAAAAASGAAPAAAAAKEEPEEDADDDM 102
Query: 370 GFGLFD 387
GFGLFD
Sbjct: 103 GFGLFD 108
>UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha;
n=19; Eukaryota|Rep: 60S acidic ribosomal protein
P2-alpha - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 32.7 bits (71), Expect = 4.6
Identities = 19/63 (30%), Positives = 22/63 (34%)
Frame = +1
Query: 199 ALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFG 378
ALEG +V +LIT + SDDDMGFG
Sbjct: 44 ALEGKSVDELITEGNEKLAAVPAAGPASAGGAAAASGDAAAEEEKEEEAAEESDDDMGFG 103
Query: 379 LFD 387
LFD
Sbjct: 104 LFD 106
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 342,102,830
Number of Sequences: 1657284
Number of extensions: 4900406
Number of successful extensions: 12236
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 11739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12177
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28437262108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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