Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_L03
         (492 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0113 + 897970-898038,898148-898271,898811-898896,898996-89...    48   5e-06
11_03_0079 + 9669666-9669728,9670779-9672545                           29   1.5  
05_04_0215 - 19117335-19117390,19118051-19118426,19118861-191189...    29   2.0  
05_05_0082 + 22252993-22255617                                         28   4.7  
03_05_1160 + 30826972-30828375,30828641-30828754,30828901-308290...    27   8.2  

>08_01_0113 +
           897970-898038,898148-898271,898811-898896,898996-899049
          Length = 110

 Score = 47.6 bits (108), Expect = 5e-06
 Identities = 30/89 (33%), Positives = 37/89 (41%)
 Frame = +1

Query: 121 TGAQISTILXXXXXXXXPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXX 300
           T  +I+T++         YWPGLFAK LE  +V DLI ++GSG                 
Sbjct: 23  TSEKIATLVKAANIKVEAYWPGLFAKLLEHRSVDDLILSVGSG-GGAAPVAAAAAPAAGG 81

Query: 301 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 387
                             SDDDMGF LFD
Sbjct: 82  GAAAAPAAEEKKEEAKEESDDDMGFSLFD 110


>11_03_0079 + 9669666-9669728,9670779-9672545
          Length = 609

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = +3

Query: 78  CFLCSHPGGCCCCRXWCAN-FHHLXSGGC--SCSAILARSVR 194
           C L S P  C     W A+  H+   GGC  S SA +A ++R
Sbjct: 54  CLLFSAPQSCSLAHTWTASVMHNRLVGGCFSSLSAAVASAIR 95


>05_04_0215 -
           19117335-19117390,19118051-19118426,19118861-19118919,
           19120455-19120712,19120853-19121059,19121201-19121351
          Length = 368

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 192 EQTWPIWRYSYSRRXQDGGNLRTSXGNSSSHQDESR 85
           E+   IW++ Y R+ + GG    + GNSS  + + R
Sbjct: 149 EELKNIWQHVYRRKLRSGGRRAAAAGNSSKGEIKKR 184


>05_05_0082 + 22252993-22255617
          Length = 874

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 126 CANFHHLXSGGCSC 167
           C+ FHH   G CSC
Sbjct: 857 CSRFHHFNGGACSC 870


>03_05_1160 +
           30826972-30828375,30828641-30828754,30828901-30829032,
           30830087-30830224
          Length = 595

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
 Frame = -1

Query: 234 GDQVTDIDAFQGFGEQTWPIWRYSYSRRXQDGG---NLRTSXGNSSSHQDESRGNTCEC 67
           GD  +D +            W  + SR+    G   +  TS   SS+  DES  N  EC
Sbjct: 127 GDDGSDCEILDDASGSARKQWEKAASRKSMPQGFRKSTSTSSAESSTQPDESEENDAEC 185


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,642,100
Number of Sequences: 37544
Number of extensions: 155562
Number of successful extensions: 455
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1023611560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)