Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_L03
(492 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic ri... 55 1e-07
CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein. 55 1e-07
BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, larg... 55 1e-07
BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, larg... 55 1e-07
AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1 pr... 55 1e-07
CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein. 53 5e-07
AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal phosph... 53 6e-07
BC060843-1|AAH60843.1| 228|Homo sapiens ANKRD46 protein protein. 31 2.2
BC050396-1|AAH50396.1| 232|Homo sapiens ANKRD46 protein protein. 31 2.2
AB077205-1|BAD23947.1| 228|Homo sapiens ankyrin repeat small pr... 31 2.2
>M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P1 mRNA, complete cds. ).
Length = 114
Score = 55.2 bits (127), Expect = 1e-07
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = +1
Query: 121 TGAQISTILXXXXXXXXPYWPGLFAKALEGINVRDLITNIGSG--VXXXXXXXXXXXXXX 294
T +I+ ++ P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 24 TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPS 83
Query: 295 XXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 387
SDDDMGFGLFD
Sbjct: 84 TAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 55.2 bits (127), Expect = 1e-07
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = +1
Query: 121 TGAQISTILXXXXXXXXPYWPGLFAKALEGINVRDLITNIGSG--VXXXXXXXXXXXXXX 294
T +I+ ++ P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 24 TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPS 83
Query: 295 XXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 387
SDDDMGFGLFD
Sbjct: 84 TAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 55.2 bits (127), Expect = 1e-07
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = +1
Query: 121 TGAQISTILXXXXXXXXPYWPGLFAKALEGINVRDLITNIGSG--VXXXXXXXXXXXXXX 294
T +I+ ++ P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 24 TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPS 83
Query: 295 XXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 387
SDDDMGFGLFD
Sbjct: 84 TAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 55.2 bits (127), Expect = 1e-07
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = +1
Query: 121 TGAQISTILXXXXXXXXPYWPGLFAKALEGINVRDLITNIGSG--VXXXXXXXXXXXXXX 294
T +I+ ++ P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 24 TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPS 83
Query: 295 XXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 387
SDDDMGFGLFD
Sbjct: 84 TAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1
protein.
Length = 114
Score = 55.2 bits (127), Expect = 1e-07
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = +1
Query: 121 TGAQISTILXXXXXXXXPYWPGLFAKALEGINVRDLITNIGSG--VXXXXXXXXXXXXXX 294
T +I+ ++ P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 24 TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPS 83
Query: 295 XXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 387
SDDDMGFGLFD
Sbjct: 84 TAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 53.2 bits (122), Expect = 5e-07
Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = +1
Query: 121 TGAQISTILXXXXXXXXPYWPGLFAKALEGINVRDLITNIGSG--VXXXXXXXXXXXXXX 294
T +I+ ++ P+WPGLFAKAL +N+ LI ++G+G
Sbjct: 24 TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICDVGAGGPAPAAGAAPAGGPAPS 83
Query: 295 XXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 387
SDDDMGFGLFD
Sbjct: 84 TAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal
phosphoprotein P1 protein.
Length = 113
Score = 52.8 bits (121), Expect = 6e-07
Identities = 28/90 (31%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Frame = +1
Query: 121 TGAQISTILXXXXXXXXPYWPGLFAKALEGINVRDLITNIGSG--VXXXXXXXXXXXXXX 294
T +I+ ++ P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 24 TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPS 83
Query: 295 XXXXXXXXXXXXXXXXXXXXSDDDMGFGLF 384
SDDDMGFGLF
Sbjct: 84 TAAAPAEEKKVEAKKEESEESDDDMGFGLF 113
>BC060843-1|AAH60843.1| 228|Homo sapiens ANKRD46 protein protein.
Length = 228
Score = 31.1 bits (67), Expect = 2.2
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = -1
Query: 168 YSYSRRXQDGG---NLRTSXGNSSSHQDESRGNTCECSF*HQF 49
++YS+R + G N+R S G + H +RGN C H+F
Sbjct: 25 FNYSKRLLESGFDPNIRDSRGRTGLHLAAARGNVDICQLLHKF 67
>BC050396-1|AAH50396.1| 232|Homo sapiens ANKRD46 protein protein.
Length = 232
Score = 31.1 bits (67), Expect = 2.2
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = -1
Query: 168 YSYSRRXQDGG---NLRTSXGNSSSHQDESRGNTCECSF*HQF 49
++YS+R + G N+R S G + H +RGN C H+F
Sbjct: 25 FNYSKRLLESGFDPNIRDSRGRTGLHLAAARGNVDICQLLHKF 67
>AB077205-1|BAD23947.1| 228|Homo sapiens ankyrin repeat small
protein protein.
Length = 228
Score = 31.1 bits (67), Expect = 2.2
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = -1
Query: 168 YSYSRRXQDGG---NLRTSXGNSSSHQDESRGNTCECSF*HQF 49
++YS+R + G N+R S G + H +RGN C H+F
Sbjct: 25 FNYSKRLLESGFDPNIRDSRGRTGLHLAAARGNVDICQLLHKF 67
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,385,649
Number of Sequences: 237096
Number of extensions: 747669
Number of successful extensions: 1659
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1634
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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