Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_L03
(492 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosom... 80 1e-15
AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p pro... 80 1e-15
AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA ... 80 1e-15
Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein ( Dros... 78 7e-15
AY113600-1|AAM29605.1| 121|Drosophila melanogaster RH52355p pro... 29 3.4
AY071678-1|AAL49300.1| 121|Drosophila melanogaster RH06571p pro... 29 3.4
AE013599-3439|AAF46882.1| 121|Drosophila melanogaster CG4250-PA... 29 3.4
M63421-1|AAA28432.1| 249|Drosophila melanogaster csp32 protein. 25 3.5
AF057167-2|AAD09428.1| 249|Drosophila melanogaster cysteine str... 25 3.5
AE014296-3660|AAF51816.1| 249|Drosophila melanogaster CG6395-PB... 25 3.5
AF057167-3|AAD09430.1| 228|Drosophila melanogaster cysteine str... 25 3.5
AE014296-3661|AAN12195.2| 228|Drosophila melanogaster CG6395-PC... 25 3.5
M63008-1|AAA28431.1| 223|Drosophila melanogaster csp29 protein. 25 3.5
AF057167-4|AAD09431.1| 223|Drosophila melanogaster cysteine str... 25 3.5
AE014296-3662|AAF51817.1| 223|Drosophila melanogaster CG6395-PA... 25 3.5
AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-P... 28 7.9
>S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosomal
protein rpA2 protein.
Length = 112
Score = 80.2 bits (189), Expect = 1e-15
Identities = 43/89 (48%), Positives = 46/89 (51%)
Frame = +1
Query: 121 TGAQISTILXXXXXXXXPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXX 300
TG +I+TIL PYWPGLFAKALEGINV+DLITNIGSGV
Sbjct: 24 TGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAA 83
Query: 301 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 387
SDDDMGFGLFD
Sbjct: 84 PAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p
protein.
Length = 112
Score = 80.2 bits (189), Expect = 1e-15
Identities = 43/89 (48%), Positives = 46/89 (51%)
Frame = +1
Query: 121 TGAQISTILXXXXXXXXPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXX 300
TG +I+TIL PYWPGLFAKALEGINV+DLITNIGSGV
Sbjct: 24 TGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAA 83
Query: 301 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 387
SDDDMGFGLFD
Sbjct: 84 PAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA
protein.
Length = 112
Score = 80.2 bits (189), Expect = 1e-15
Identities = 43/89 (48%), Positives = 46/89 (51%)
Frame = +1
Query: 121 TGAQISTILXXXXXXXXPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXX 300
TG +I+TIL PYWPGLFAKALEGINV+DLITNIGSGV
Sbjct: 24 TGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAA 83
Query: 301 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 387
SDDDMGFGLFD
Sbjct: 84 PAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein (
Drosophila melanogastermRNA for A-type ribosomal protein
rp21C. ).
Length = 112
Score = 77.8 bits (183), Expect = 7e-15
Identities = 42/89 (47%), Positives = 45/89 (50%)
Frame = +1
Query: 121 TGAQISTILXXXXXXXXPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXX 300
TG +I+TIL PYWPGLFAKALE INV+DLITNIGSGV
Sbjct: 24 TGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLITNIGSGVGAAPAGGAAPAAAAAA 83
Query: 301 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 387
SDDDMGFGLFD
Sbjct: 84 PAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>AY113600-1|AAM29605.1| 121|Drosophila melanogaster RH52355p
protein.
Length = 121
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +3
Query: 6 SCRS-GLRXLARSNLKIGVKSCIRMCFLCSHPGGCCCCRXWCANFHHLXSGGC-SCSA 173
+C S G+R + + K+ + +C G CCCC +C + C SC A
Sbjct: 57 TCPSCGVRRETKVEFEPSTKTHLLALLICMLGGICCCCIPYCTDSCQSAKHTCTSCGA 114
>AY071678-1|AAL49300.1| 121|Drosophila melanogaster RH06571p
protein.
Length = 121
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +3
Query: 6 SCRS-GLRXLARSNLKIGVKSCIRMCFLCSHPGGCCCCRXWCANFHHLXSGGC-SCSA 173
+C S G+R + + K+ + +C G CCCC +C + C SC A
Sbjct: 57 TCPSCGVRRETKVEFEPSTKTHLLALLICMLGGICCCCIPYCTDSCQSAKHTCTSCGA 114
>AE013599-3439|AAF46882.1| 121|Drosophila melanogaster CG4250-PA
protein.
Length = 121
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +3
Query: 6 SCRS-GLRXLARSNLKIGVKSCIRMCFLCSHPGGCCCCRXWCANFHHLXSGGC-SCSA 173
+C S G+R + + K+ + +C G CCCC +C + C SC A
Sbjct: 57 TCPSCGVRRETKVEFEPSTKTHLLALLICMLGGICCCCIPYCTDSCQSAKHTCTSCGA 114
>M63421-1|AAA28432.1| 249|Drosophila melanogaster csp32 protein.
Length = 249
Score = 24.6 bits (51), Expect(2) = 3.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 105 CCCCRXWCANF 137
CCCC C NF
Sbjct: 123 CCCCCCCCCNF 133
Score = 23.0 bits (47), Expect(2) = 3.5
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3
Query: 87 CSHPGGCCCCRXWC 128
C+ GCCCC C
Sbjct: 115 CAVITGCCCCCCCC 128
>AF057167-2|AAD09428.1| 249|Drosophila melanogaster cysteine string
protein 1 protein.
Length = 249
Score = 24.6 bits (51), Expect(2) = 3.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 105 CCCCRXWCANF 137
CCCC C NF
Sbjct: 123 CCCCCCCCCNF 133
Score = 23.0 bits (47), Expect(2) = 3.5
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3
Query: 87 CSHPGGCCCCRXWC 128
C+ GCCCC C
Sbjct: 115 CAVITGCCCCCCCC 128
>AE014296-3660|AAF51816.1| 249|Drosophila melanogaster CG6395-PB,
isoform B protein.
Length = 249
Score = 24.6 bits (51), Expect(2) = 3.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 105 CCCCRXWCANF 137
CCCC C NF
Sbjct: 123 CCCCCCCCCNF 133
Score = 23.0 bits (47), Expect(2) = 3.5
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3
Query: 87 CSHPGGCCCCRXWC 128
C+ GCCCC C
Sbjct: 115 CAVITGCCCCCCCC 128
>AF057167-3|AAD09430.1| 228|Drosophila melanogaster cysteine string
protein 2 protein.
Length = 228
Score = 24.6 bits (51), Expect(2) = 3.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 105 CCCCRXWCANF 137
CCCC C NF
Sbjct: 123 CCCCCCCCCNF 133
Score = 23.0 bits (47), Expect(2) = 3.5
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3
Query: 87 CSHPGGCCCCRXWC 128
C+ GCCCC C
Sbjct: 115 CAVITGCCCCCCCC 128
>AE014296-3661|AAN12195.2| 228|Drosophila melanogaster CG6395-PC,
isoform C protein.
Length = 228
Score = 24.6 bits (51), Expect(2) = 3.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 105 CCCCRXWCANF 137
CCCC C NF
Sbjct: 123 CCCCCCCCCNF 133
Score = 23.0 bits (47), Expect(2) = 3.5
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3
Query: 87 CSHPGGCCCCRXWC 128
C+ GCCCC C
Sbjct: 115 CAVITGCCCCCCCC 128
>M63008-1|AAA28431.1| 223|Drosophila melanogaster csp29 protein.
Length = 223
Score = 24.6 bits (51), Expect(2) = 3.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 105 CCCCRXWCANF 137
CCCC C NF
Sbjct: 123 CCCCCCCCCNF 133
Score = 23.0 bits (47), Expect(2) = 3.5
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3
Query: 87 CSHPGGCCCCRXWC 128
C+ GCCCC C
Sbjct: 115 CAVITGCCCCCCCC 128
>AF057167-4|AAD09431.1| 223|Drosophila melanogaster cysteine string
protein 3 protein.
Length = 223
Score = 24.6 bits (51), Expect(2) = 3.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 105 CCCCRXWCANF 137
CCCC C NF
Sbjct: 123 CCCCCCCCCNF 133
Score = 23.0 bits (47), Expect(2) = 3.5
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3
Query: 87 CSHPGGCCCCRXWC 128
C+ GCCCC C
Sbjct: 115 CAVITGCCCCCCCC 128
>AE014296-3662|AAF51817.1| 223|Drosophila melanogaster CG6395-PA,
isoform A protein.
Length = 223
Score = 24.6 bits (51), Expect(2) = 3.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 105 CCCCRXWCANF 137
CCCC C NF
Sbjct: 123 CCCCCCCCCNF 133
Score = 23.0 bits (47), Expect(2) = 3.5
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3
Query: 87 CSHPGGCCCCRXWC 128
C+ GCCCC C
Sbjct: 115 CAVITGCCCCCCCC 128
>AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-PB,
isoform B protein.
Length = 541
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +3
Query: 114 CRXWCANFHHLXSGGCSCSAILARSVRQSLGRHQCP*PDHQHRL 245
CR C F C+ S ++ +SV L H C H+ RL
Sbjct: 2 CRVPCIKFLEPAVSNCANSQMIVQSVLMELVFHSCAAGPHEKRL 45
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,721,123
Number of Sequences: 53049
Number of extensions: 251566
Number of successful extensions: 685
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1721789184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -