Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_L02
         (722 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    26   1.0  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    24   4.1  
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    24   4.1  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1022

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 13/59 (22%), Positives = 26/59 (44%)
 Frame = +2

Query: 443  VDPYVNKYDCRGAVSLSSSMQSNVPSPFTGNHTHLNMPGSQWGQGHKYLSDHLHSAHYL 619
            V+ +  ++    + S +  +  N+    T  H ++    SQ+  GH +   HLH   Y+
Sbjct: 856  VEAWQREWSTTTSGSWTRRLIPNIQPWITRRHGNIEFHMSQFLSGHGFFRSHLHRMGYV 914


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +2

Query: 254 NVHVSPLLKSQSVALKLPTNVVDINASEVGRFSPNR 361
           N+HVSPL  +      LP  ++D      G F PNR
Sbjct: 295 NLHVSPLTPNTFFFYMLPPIILD-----AGYFMPNR 325


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = +2

Query: 236 SSYIKQNVHVSPLLKSQSVA---LKLPTNVVDINASEV 340
           S YIKQ  ++SPL+   S+A   L L  NVV  N   V
Sbjct: 89  SWYIKQIGNMSPLMFCSSLAMVLLLLQANVVPANGKYV 126


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 781,178
Number of Sequences: 2352
Number of extensions: 17615
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)