Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_L02
         (722 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024845-3|AAF60852.1|  619|Caenorhabditis elegans Hypothetical ...    33   0.16 
Z92803-9|CAC35822.1|  248|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z68009-2|CAA92004.2|  891|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AF077540-5|AAC26308.1|  417|Caenorhabditis elegans C-type lectin...    28   5.9  

>AC024845-3|AAF60852.1|  619|Caenorhabditis elegans Hypothetical
           protein Y65B4BL.2 protein.
          Length = 619

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 125 CPLYVVRTYI*QTQTKMFRLYLKPNC 202
           CP +  + Y     T++F++YLKPNC
Sbjct: 472 CPAFTCKNYSVSGDTRLFQVYLKPNC 497


>Z92803-9|CAC35822.1|  248|Caenorhabditis elegans Hypothetical
           protein K01G5.10 protein.
          Length = 248

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
 Frame = +3

Query: 384 LLILTIKNNMTCLK-LI*QYKLTHMLTNMIVEGLLAYLRPCRATFQVLSQETILISTCQ- 557
           ++++ I N  + LK L+ Q+ L  + +  ++ G + Y +P    FQ++     LIS  + 
Sbjct: 142 IILVVISNFDSRLKSLLSQFNLLDLFSMTVLSGEIGYEKPDEKIFQLVVNHFDLISPSEI 201

Query: 558 AHNGDKATNTY 590
            H GD   N +
Sbjct: 202 LHIGDNLKNDF 212


>Z68009-2|CAA92004.2|  891|Caenorhabditis elegans Hypothetical
           protein R09A8.2 protein.
          Length = 891

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = +2

Query: 356 NRERDISGPVINSHYKKQHDMSKIDITIQVDPYV--NKYDCRGAVSLSSSMQSNVPSPFT 529
           N    ISG  +N+ Y++   +   D   Q+DP +  N  D    +  S ++Q++      
Sbjct: 283 NGMNSISGNTLNTSYEETRQLKNSDHVKQIDPQMKGNSVDAHKGLQFSMTVQNSSCLSSD 342

Query: 530 GN 535
           GN
Sbjct: 343 GN 344


>AF077540-5|AAC26308.1|  417|Caenorhabditis elegans C-type lectin
           protein 20 protein.
          Length = 417

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -2

Query: 457 NIWVNLYCYINFRHVMLFFIVRINNRTGNISFSVRRKSPYFGCVNIN 317
           N+W+ LYC  N+R   L+    I+    N  F  R       CV +N
Sbjct: 79  NVWLGLYCINNYRSNCLWDDSNISTDQRN-GFQSRPNVTQGNCVTVN 124


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,028,778
Number of Sequences: 27780
Number of extensions: 382765
Number of successful extensions: 967
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)