Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_K24
(769 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 225 3e-59
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 195 3e-50
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 131 5e-31
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 122 2e-28
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 119 3e-27
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 119 3e-27
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 98 5e-21
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 98 5e-21
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 86 3e-17
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 81 6e-16
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 77 1e-14
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 75 7e-14
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 73 2e-13
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 71 9e-13
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 69 4e-12
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 60 1e-09
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 60 1e-09
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 58 9e-09
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 56 4e-08
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 54 1e-07
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 49 3e-06
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 48 6e-06
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 42 4e-04
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 40 0.003
Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 37 0.018
AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical ... 31 0.68
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 31 1.2
U40060-6|AAA81144.1| 268|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylat... 29 4.8
Z77662-11|CAI70418.1| 358|Caenorhabditis elegans Hypothetical p... 28 8.4
U55365-9|AAA98574.1| 346|Caenorhabditis elegans Hypothetical pr... 28 8.4
AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical ... 28 8.4
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 225 bits (550), Expect = 3e-59
Identities = 105/198 (53%), Positives = 137/198 (69%)
Frame = +3
Query: 102 MANXAAKRIKXXFKEXMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEI 281
M+N A R++ KE + + E+ I + ++NEN TE+KG I GP DTPY GG F L+I
Sbjct: 1 MSNIAFNRLQRECKEVVTNSEISETGIMIEILNENLTEIKGHIRGPPDTPYAGGMFDLDI 60
Query: 282 KVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAG 461
K+P+ YPF+PP ++F TKIWHPNVSS TG ICLDILKDQWAA+LTLRTVLLS+QAL+
Sbjct: 61 KIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDILKDQWAASLTLRTVLLSIQALMCTP 120
Query: 462 EPNDPQDAVVAKQFRENPRLFTMTARHWTNVYAGGPNIVHECNSKVQRMLDMGIDEHQAR 641
EP DPQDAVVAKQ+ E P +F TA +WT +A G + V ++ DMG+ E +A
Sbjct: 121 EPKDPQDAVVAKQYMEKPAVFKATAEYWTTKFAKGAVKNAGYQALVDKLKDMGVREEEAV 180
Query: 642 VALSSYDWDLXRATEQLF 695
LS +WD+ R+T +F
Sbjct: 181 SVLSCNNWDINRSTVYIF 198
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 195 bits (476), Expect = 3e-50
Identities = 100/214 (46%), Positives = 136/214 (63%), Gaps = 16/214 (7%)
Frame = +3
Query: 102 MANXAAKRIKXXFKEXMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEI 281
M+N A R+ KE + ++ I + + N ++KG I GP TPY GGTF +++
Sbjct: 15 MSNLALARVTRKCKEVANASDITEAGIHVEIKENNLMDIKGFIKGPEGTPYAGGTFEIKV 74
Query: 282 KVPETYPFNPPKI---------------RFLTKIWHPNVSSVTGAICLDILKDQWAAALT 416
+PE YPF PPK+ +F+T+IWHPN+SS TG ICLDILKD+W A+LT
Sbjct: 75 DIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLT 134
Query: 417 LRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHWTNVYAGGPNIVH-ECNS 593
LRTVLLSLQA+L + EP+DPQDAVVAKQF N +FT TA +WT+ +A V + N
Sbjct: 135 LRTVLLSLQAMLCSPEPSDPQDAVVAKQFINNYPMFTATAVYWTSYFANSKKDVEPDFNR 194
Query: 594 KVQRMLDMGIDEHQARVALSSYDWDLXRATEQLF 695
KV R+++MGI E +A V LS +W L +A + +F
Sbjct: 195 KVGRLIEMGIRETEAIVYLSCNNWKLEQALQFIF 228
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 131 bits (317), Expect = 5e-31
Identities = 62/111 (55%), Positives = 79/111 (71%)
Frame = +3
Query: 228 IAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAA 407
IAGP D+P+ GG F LE+ +PE YP PK+RF+TKI+HPN+ + G ICLDILKD+W+
Sbjct: 40 IAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNIDKL-GRICLDILKDKWSP 98
Query: 408 ALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHWTNVYA 560
AL +RTVLLS+QALLSA P DP VA+Q++ N TA+ WT YA
Sbjct: 99 ALQIRTVLLSIQALLSAPNPEDPLATDVAEQWKTNEAEAIKTAKQWTMNYA 149
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 122 bits (295), Expect = 2e-28
Identities = 61/155 (39%), Positives = 91/155 (58%), Gaps = 3/155 (1%)
Frame = +3
Query: 216 LKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICL-DILK 392
++G I G +TPYEGG F L+IK+ E+YPF P ++F+TKIWHP+VS G ICL D+
Sbjct: 381 IQGIIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDN 440
Query: 393 DQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHWTNVYAGGPN 572
W ++T+ VL+ +Q+ +S +P D + +Q N +F TA WT +AG
Sbjct: 441 GVWPVSMTIYKVLIVIQSWMSNFNEKEPIDVEILEQATNNREVFEKTAEFWTKRFAGSRR 500
Query: 573 IVH--ECNSKVQRMLDMGIDEHQARVALSSYDWDL 671
+ EC KVQ M + +E + +ALS ++W L
Sbjct: 501 KPYNQECQQKVQLMSRVIRNEELSIIALSYHNWTL 535
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 119 bits (286), Expect = 3e-27
Identities = 54/124 (43%), Positives = 78/124 (62%)
Frame = +3
Query: 189 GLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTG 368
G V ++ + I GP ++PY+GG F L I P YPF PPK+ F T+I+HPN++S G
Sbjct: 24 GPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NG 82
Query: 369 AICLDILKDQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHWT 548
+ICLDIL+ QW+ ALT+ VLLS+ +LL P+DP +A+ ++ + + AR WT
Sbjct: 83 SICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWT 142
Query: 549 NVYA 560
YA
Sbjct: 143 QKYA 146
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 119 bits (286), Expect = 3e-27
Identities = 54/124 (43%), Positives = 78/124 (62%)
Frame = +3
Query: 189 GLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTG 368
G V ++ + I GP ++PY+GG F L I P YPF PPK+ F T+I+HPN++S G
Sbjct: 24 GPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NG 82
Query: 369 AICLDILKDQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHWT 548
+ICLDIL+ QW+ ALT+ VLLS+ +LL P+DP +A+ ++ + + AR WT
Sbjct: 83 SICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWT 142
Query: 549 NVYA 560
YA
Sbjct: 143 QKYA 146
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 98.3 bits (234), Expect = 5e-21
Identities = 48/139 (34%), Positives = 81/139 (58%)
Frame = +3
Query: 102 MANXAAKRIKXXFKEXMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEI 281
M + +R+ FK K +E + +N + I GP +TP+E GTF L +
Sbjct: 1 MTTPSRRRLMRDFK---KLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSL 57
Query: 282 KVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAG 461
+ E YP PP ++F++K++HPNV + G+ICLDIL+++W+ + +L S+Q+LL
Sbjct: 58 EFTEEYPNKPPTVKFISKMFHPNVYA-DGSICLDILQNRWSPTYDVAAILTSIQSLLDEP 116
Query: 462 EPNDPQDAVVAKQFRENPR 518
PN P +++ A+ ++EN R
Sbjct: 117 NPNSPANSLAAQLYQENRR 135
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 98.3 bits (234), Expect = 5e-21
Identities = 48/139 (34%), Positives = 81/139 (58%)
Frame = +3
Query: 102 MANXAAKRIKXXFKEXMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEI 281
M + +R+ FK K +E + +N + I GP +TP+E GTF L +
Sbjct: 1 MTTPSRRRLMRDFK---KLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSL 57
Query: 282 KVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAG 461
+ E YP PP ++F++K++HPNV + G+ICLDIL+++W+ + +L S+Q+LL
Sbjct: 58 EFTEEYPNKPPTVKFISKMFHPNVYA-DGSICLDILQNRWSPTYDVAAILTSIQSLLDEP 116
Query: 462 EPNDPQDAVVAKQFRENPR 518
PN P +++ A+ ++EN R
Sbjct: 117 NPNSPANSLAAQLYQENRR 135
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 85.8 bits (203), Expect = 3e-17
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Frame = +3
Query: 234 GPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAAL 413
GP DT YE G + + + +P+ YPF P I FL KI+HPN+ +G +CLD++ W A
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWTALY 100
Query: 414 TLRTVL-LSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHWTNVYAGGPNIVHECN 590
L + L LL+ DP + A+ + P + T R + +A + C+
Sbjct: 101 DLTNIFDTFLPQLLTYPNAADPLNGEAARLYIHKPEEYRRTCREYVMRFASEHRAIEGCS 160
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 81.4 bits (192), Expect = 6e-16
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Frame = +3
Query: 237 PVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDIL-KDQWAAAL 413
P PY G F + I P YPF PPK+ F TKI+HPNV G CL I+ + W A
Sbjct: 41 PDKEPYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDE-EGKFCLPIVTAENWKPAT 99
Query: 414 TLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHWTNVYA 560
V+++L +L++ EP+ P A VA++F+++ + F TA T +A
Sbjct: 100 KTEQVMMALLSLINEPEPSHPIRADVAEEFQKDHKKFMKTAEEHTRKHA 148
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 77.4 bits (182), Expect = 1e-14
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 2/169 (1%)
Frame = +3
Query: 192 LVNENWTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGA 371
+VNE ++ IAGP DTPYE G F +++ P+ YP P+I+F T IW+ V TG
Sbjct: 23 MVNEEDKKITFHIAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWNCAVEPSTGQ 82
Query: 372 ICLDILKDQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHWTN 551
+ ++ + L + L ++ L + E ++ +F TAR WT
Sbjct: 83 VHIENY-----SRLNVSEALSYIEDLFRSIEVDEEV-------------MFYKTARFWTT 124
Query: 552 VYAGGPNIVHE--CNSKVQRMLDMGIDEHQARVALSSYDWDLXRATEQL 692
+AGG + + KV +++MG ++ +AL DW+L A EQL
Sbjct: 125 EFAGGRPLPDDDWQKKKVDSLIEMGFSRLESILALGGSDWNLADAAEQL 173
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 74.5 bits (175), Expect = 7e-14
Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 17/125 (13%)
Frame = +3
Query: 189 GLVNEN----WTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVS 356
GLV++N W L + GP DT YEGG F + P YP PPK++F+++IWHPN+
Sbjct: 26 GLVDDNDIYKWEVL---VIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNID 82
Query: 357 SVTGAICLDILKD-------------QWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAK 497
G +C+ IL D +W T+ T+LLS+ ++L+ P + AK
Sbjct: 83 K-EGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAK 141
Query: 498 QFREN 512
REN
Sbjct: 142 MQREN 146
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 72.9 bits (171), Expect = 2e-13
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 15/160 (9%)
Frame = +3
Query: 102 MANXAAKRIKXXFKEXMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEI 281
MA A KR+ +KE G I + +N+ E + I GP +T + G F I
Sbjct: 1 MAGYALKRLMTEYKELTTRPPE--GIIAAPIDEDNFFEWECLITGPEETCFANGVFPARI 58
Query: 282 KVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDIL-------------KDQWAAALTLR 422
P+ YP +PPK+RF I+HPN+ + G +C+ IL ++W+ ++
Sbjct: 59 TFPQDYPLSPPKMRFTCGIFHPNIYA-DGRVCISILHAPGDDPTGYELSNERWSPVQSIE 117
Query: 423 TVLLSLQALLSAGEPND--PQDAVVAKQFRENPRLFTMTA 536
+LLS+ ++L+ EPND P + AK +RE+ F A
Sbjct: 118 KILLSVVSMLA--EPNDESPANVSAAKMWREDRAQFEKIA 155
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 70.9 bits (166), Expect = 9e-13
Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 13/107 (12%)
Frame = +3
Query: 228 IAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILK----- 392
I GP T Y+GG F I+ P YP++PP ++F TK+WHPNV G +C+ IL
Sbjct: 46 IYGPPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYE-NGDLCISILHSPIDD 104
Query: 393 --------DQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRE 509
++W ++RT+LLS+ +LL+ + P + + +R+
Sbjct: 105 PQSGELACERWNPTQSVRTILLSVISLLNEPNTSSPANVDASVMYRK 151
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 68.9 bits (161), Expect = 4e-12
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 4/142 (2%)
Frame = +3
Query: 102 MANXAAKRIKXXFKEXMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEI 281
M++ A +R+ + +KSE G + + + + K + G T Y G F+L+
Sbjct: 1 MSDAATRRLMKELAQ-LKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQF 59
Query: 282 KVPETYPFNPPKIRFL--TKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLS 455
YPFN P++ F+ T HP++ S G ICL IL D W AL++++V LS+ ++LS
Sbjct: 60 TFGPQYPFNSPEVMFVGETIPAHPHIYS-NGHICLSILSDDWTPALSVQSVCLSILSMLS 118
Query: 456 AG-EPNDP-QDAVVAKQFRENP 515
+ E P DA+ + +NP
Sbjct: 119 SSKEKKHPIDDAIYVRTCSKNP 140
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Frame = +3
Query: 228 IAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKD--QW 401
I G DT +EGG + + + + +P PPK +F ++HPNV +G +CL +L + W
Sbjct: 45 IPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYP-SGTVCLSLLDENKDW 103
Query: 402 AAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFREN 512
+++++ +L+ +Q LL+ DP A + + +N
Sbjct: 104 KPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQN 140
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Frame = +3
Query: 228 IAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKD--QW 401
I G DT +EGG + + + + +P PPK +F ++HPNV +G +CL +L + W
Sbjct: 45 IPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYP-SGTVCLSLLDENKDW 103
Query: 402 AAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFREN 512
+++++ +L+ +Q LL+ DP A + + +N
Sbjct: 104 KPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQN 140
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 60.1 bits (139), Expect = 2e-09
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Frame = +3
Query: 237 PVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILK----DQ-- 398
P + Y GG F +I VP Y PP ++ LTK+WHPN++ G+ICL IL+ DQ
Sbjct: 67 PQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINE-DGSICLSILRQNSLDQYG 125
Query: 399 WAAALTLRTVLLSLQALLS-AGEPNDPQDAVVAKQFRENPRLFTMTARHWTNVY 557
W L V+ L +L + + ND + A+ + +N F R + + Y
Sbjct: 126 WRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYISRY 179
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 57.6 bits (133), Expect = 9e-09
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +3
Query: 252 YEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLD-ILKDQWAAALTLRTV 428
Y+ F L + V YPF PP ++F ++HPNV VT +C +L++ W T+ V
Sbjct: 57 YKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQENWKPETTMEDV 116
Query: 429 LLSLQALLSAGEPNDPQDAVVAKQFREN 512
LL+L LL+ + + P + A + N
Sbjct: 117 LLNLIVLLNEPDLSRPVNIDAAHDYIHN 144
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 55.6 bits (128), Expect = 4e-08
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 12/91 (13%)
Frame = +3
Query: 216 LKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTK-----IWHPNVSSVTGAICL 380
+K I+GP DTPY G F +I P YPF+PPK FLT ++PN+ + G ICL
Sbjct: 445 IKVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYN-DGKICL 503
Query: 381 DIL-------KDQWAAALTLRTVLLSLQALL 452
IL +++W +L VL+S+Q ++
Sbjct: 504 SILGTWEGRPEEKWNPYCSLMQVLVSIQEVI 534
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 53.6 bits (123), Expect = 1e-07
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Frame = +3
Query: 102 MANXAAKRIKXXFKEXMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEI 281
++ A +R+K ++ +K +K + N E + I G TPYEGG ++ ++
Sbjct: 5 VSTVALQRLKKDYQRLLKEPVPF---MKAAPLETNILEWRYIIIGAPKTPYEGGIYMGKL 61
Query: 282 KVPETYPFNPPKIRFLTKIWHPNVSSVTGA-ICL---DILKDQWAAALTLRTVLLSLQAL 449
P+ +PF PP I LT PN T +CL D D W A T+ T++ L +
Sbjct: 62 LFPKDFPFKPPAILMLT----PNGRFQTNTRLCLSISDYHPDTWNPAWTVSTIITGLMSF 117
Query: 450 LSAGEP 467
++ +P
Sbjct: 118 MNDNQP 123
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 49.2 bits (112), Expect = 3e-06
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 4/137 (2%)
Frame = +3
Query: 207 WTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDI 386
W + GP +P+EGG + + + +P PP F T + HPNV + G+I L +
Sbjct: 68 WCSWICTVPGPRGSPWEGGEYEVSVNF-HKWPIIPPICEFKTPLHHPNV-DLRGSIYLKM 125
Query: 387 L-KDQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTAR--HWT-NV 554
L ++ W++ +L+ +L + LL+ + + ++ + AR WT N
Sbjct: 126 LEQEHWSSETSLKKLLREISNLLATPDLTQAANIEAWMEYENQRENYEAKARAYAWTVNP 185
Query: 555 YAGGPNIVHECNSKVQR 605
A G V E NS +QR
Sbjct: 186 NAVGYMEVSE-NSGIQR 201
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 48.4 bits (110), Expect = 6e-06
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Frame = +3
Query: 174 GSIKLGLVNEN---WTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWH 344
G+I GL +++ T I GP TPYE + L+I+ YP PP +RF TK+
Sbjct: 24 GNISWGLEDDSDMTLTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHM 83
Query: 345 PNVSSVTGAI---CLDILKDQWAAALTLRTVLLSLQALLSAGEPN 470
V+ G I L L++ W+ + ++TVL ++ + + N
Sbjct: 84 VGVNQSNGVIDKRNLTTLRN-WSNSYMIKTVLEDIRKNMMMAKEN 127
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 42.3 bits (95), Expect = 4e-04
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Frame = +3
Query: 99 TMANXAAKRIKXXFKEXMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLE 278
T ++ A +R++ + + M ++ + G IK +N E + G DTP+ GG + +
Sbjct: 15 TASSSAVRRLQKDYAKLM--QDPVDG-IKALPNEDNILEWHYCLRGSPDTPFYGGYYWGK 71
Query: 279 IKVPETYPFNPPKIRFLTKIWHPNVSSVTGA-ICL---DILKDQWAAALTLRTVLLSLQA 446
+ E +P++PP I +T PN T +CL D + W T+ +L+ L +
Sbjct: 72 VIFKENFPWSPPAITMIT----PNGRFQTNTRLCLSISDYHPESWNPGWTVSAILIGLHS 127
Query: 447 LLSAGEP 467
++ P
Sbjct: 128 FMNENSP 134
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 39.5 bits (88), Expect = 0.003
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = +3
Query: 195 VNENWTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVS-SVTGA 371
+ +N E I G + T +EGG + I P YP PP + LT PN +
Sbjct: 34 MEDNLFEWHFTIRGTLGTDFEGGIYHGRIIFPADYPMKPPNLILLT----PNGRFELNKK 89
Query: 372 ICLDIL---KDQWAAALTLRTVLLSLQALL 452
+CL I + W + ++RT LL+L L
Sbjct: 90 VCLSISGYHPETWLPSWSIRTALLALIGFL 119
>Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical
protein F26H9.7 protein.
Length = 219
Score = 36.7 bits (81), Expect = 0.018
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 228 IAGPVDTPYEGGTFLLEIKV-PETYPFNPPKIRFLTKIWHPNV 353
I GPV + YEGGTF +I + P P++ F T I+HPN+
Sbjct: 68 IDGPVGSIYEGGTFFADINIQPYQNHSLIPRVCFHTFIFHPNL 110
>AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical
protein R10F2.1 protein.
Length = 2779
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 423 TVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFT 527
TVLL++QA L +GE N Q + + +NP F+
Sbjct: 804 TVLLNIQATLPSGESNQTQVVIFIEDHNDNPPQFS 838
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 189 GLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKI 320
G V ++ + I GP ++PY+GG F L I +T N ++
Sbjct: 24 GSVGDDLYHWQATIMGPPESPYQGGIFFLTITSRQTIHSNHQRL 67
>U40060-6|AAA81144.1| 268|Caenorhabditis elegans Hypothetical
protein F38B6.3 protein.
Length = 268
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 393 DQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQF 503
DQ+ A +R L L+ LL+ P DP V +QF
Sbjct: 231 DQFTVADVIRNNLNQLRTLLNGNAPIDPNSVFVFRQF 267
>AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylating
with usp/ubp andotu domains protein 2 protein.
Length = 551
Score = 28.7 bits (61), Expect = 4.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +3
Query: 543 WTNVYAGGPNIVHECNSKVQRMLDM 617
W NV+ + VH C +V+R+L++
Sbjct: 5 WNNVFHQRQDFVHSCTHRVERLLEL 29
>Z77662-11|CAI70418.1| 358|Caenorhabditis elegans Hypothetical
protein F47B8.12 protein.
Length = 358
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -3
Query: 662 II*GESYSGLMFINTHVQHTLHFAIAFV 579
I+ +++SGLM +NT Q HF+ F+
Sbjct: 97 IVMNDTFSGLMIVNTGWQFNFHFSQIFL 124
>U55365-9|AAA98574.1| 346|Caenorhabditis elegans Hypothetical
protein C12D5.9 protein.
Length = 346
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 329 QKAYLRRIERISFGNFNFKEEGPTFIRSI-NRTSYLAFEF 213
++ Y R+ E+I F N+ +E P F ++ N++ + EF
Sbjct: 94 KEVYERKCEKIEFNNYKMQECIPKFYETVYNKSRHCTVEF 133
>AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical
protein Y75B8A.8 protein.
Length = 715
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 273 LEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALL 452
L I +P TYP +P ++F P S G + + + A T+RT+ ++A
Sbjct: 598 LRISLPRTYPIDPATVQFDRTF--PQ-DSEHGPVLQKLFEKNLGAKTTVRTMTDFVEAYC 654
Query: 453 SAGE 464
SA E
Sbjct: 655 SACE 658
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,779,168
Number of Sequences: 27780
Number of extensions: 339960
Number of successful extensions: 861
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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