Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_K24
         (769 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.4  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   7.2  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   7.2  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   9.5  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   9.5  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +3

Query: 534 ARHWTN-VYAGGPNIVHECNSKVQRMLDMGIDEHQARVALSSYDWDLXRAT 683
           A+H  N +YA    IVHE   ++  ++   I E +  V LS+ D  L + T
Sbjct: 333 AQHKENELYANLMKIVHEKQQEITGLIQNIIQEMKNDVLLSNNDVYLYQNT 383



 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 291 ETYPFNP 311
           ETYPFNP
Sbjct: 175 ETYPFNP 181


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +3

Query: 534 ARHWTN-VYAGGPNIVHECNSKVQRMLDMGIDEHQARVALSSYDWDLXRAT 683
           A+H  N +YA    IVHE   ++  ++   I E +  V LS+ D  L + T
Sbjct: 371 AQHKENELYANLMKIVHEKQQEITGLIQNIIQEMKNDVLLSNNDVYLYQNT 421



 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 291 ETYPFNP 311
           ETYPFNP
Sbjct: 213 ETYPFNP 219


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 594 CYCIRVLYLAHQH 556
           CYC R  YL  +H
Sbjct: 91  CYCCRESYLKERH 103


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 594 CYCIRVLYLAHQH 556
           CYC R  YL  +H
Sbjct: 91  CYCCRESYLKERH 103


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 323 AYLRRIERISFGNFN 279
           AYL R ERI++ N N
Sbjct: 445 AYLSRSERINYYNVN 459


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 294 TYPFNPPKIRFLTKIWHP 347
           TY F+ P++ +  K +HP
Sbjct: 137 TYNFDYPQVPYTVKNFHP 154


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,966
Number of Sequences: 438
Number of extensions: 4140
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)