Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_K18
(807 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosi... 83 3e-16
Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical pr... 34 0.10
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 31 1.3
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 29 3.0
AC006684-10|AAF39962.2| 665|Caenorhabditis elegans Hypothetical... 29 3.0
Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical p... 29 3.9
Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical pr... 29 5.2
AF100307-11|AAC68929.1| 304|Caenorhabditis elegans Hypothetical... 29 5.2
Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical pr... 28 6.8
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr... 28 6.8
U29488-3|AAA68772.1| 221|Caenorhabditis elegans Hypothetical pr... 28 6.8
U13876-14|AAA21168.1| 2500|Caenorhabditis elegans Not-like (yeas... 28 6.8
AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear recep... 28 6.8
AY204184-1|AAO39188.1| 353|Caenorhabditis elegans nuclear recep... 28 6.8
AF022981-2|AAG24200.1| 236|Caenorhabditis elegans Hypothetical ... 28 6.8
Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical pr... 28 9.0
U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical p... 28 9.0
>AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosin
(four thymosin repeatprotein) protein 1 protein.
Length = 151
Score = 82.6 bits (195), Expect = 3e-16
Identities = 50/119 (42%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Frame = +3
Query: 129 LPKVATDLKSQL-EGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLK 305
LPK+ +L + EG L+ V+T EK VLP+ EDVA EK IE FDS++L
Sbjct: 7 LPKMNQELAGAVREGLE---LKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDSTKLH 63
Query: 306 HTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQEKS 482
T +EK LP D I+ EK+ + + I NF LK TET EKN LP+ + +EK+
Sbjct: 64 STPVKEKIVLPSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVLPSPTDVAREKT 122
>Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical
protein R186.3 protein.
Length = 240
Score = 34.3 bits (75), Expect = 0.10
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +3
Query: 63 LIKNLLIHNGLLRVVXLPPXKALPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVA 242
LI+N L LLR+V + A K A D+ E F T L +VD ++ +D++
Sbjct: 104 LIENHLHSRSLLRIVFVVDSAAFSKNARDVA---ELFYTVALENVDKVPILIACHKQDLS 160
Query: 243 TEKTQKSLFDGIEK 284
KT+K + + +EK
Sbjct: 161 LAKTEKVIRNSLEK 174
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +3
Query: 207 EKIVLPSAEDVATEKTQKSLFDG-IEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFL 383
EK L + + EK +K D +E+ + K E +EK +++ ++ ++E+NK
Sbjct: 120 EKDKLAEEKRLDKEKKEKERLDKKLEEDKKKEEKRKEAEEKKKKDEEEKMKKDEERNKRK 179
Query: 384 NGIENFDPTKLKHTETCEKNPLPTKDVIEQEK 479
E K + E ++ ++ IE+ K
Sbjct: 180 KEEEEKKEAKRREDEEKKEAKRKEEEAIEERK 211
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 359 GEGKEQIPERHRELRSH*AEAHGDVRKEPAPHKGRH*AREISLNHY 496
G+ + Q P+ + RS + GD+ P P A EI L+HY
Sbjct: 320 GQNQPQQPQYQQHPRSQSVDPSGDMNGGPRPIHQNFSASEIELHHY 365
>AC006684-10|AAF39962.2| 665|Caenorhabditis elegans Hypothetical
protein T02H6.2 protein.
Length = 665
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/83 (28%), Positives = 36/83 (43%)
Frame = +3
Query: 231 EDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPT 410
E A +K ++SL K DSS++K ++T NP D I +++ + + F
Sbjct: 537 EAEARKKVEESLK---RKLDSSKVKPSQTSSPNPY--TDTILSDEHLTQLARDLSKFKSN 591
Query: 411 KLKHTETCEKNPLPTKDVIEQEK 479
K C LP DV EK
Sbjct: 592 LAK----CFGTKLPADDVTSDEK 610
>Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical protein
C18D4.2b protein.
Length = 1376
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/75 (25%), Positives = 27/75 (36%)
Frame = +3
Query: 219 LPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIEN 398
LPS D T +K FD+ LK + L D + L+ +N
Sbjct: 1094 LPSTSDEKTPTNRKRSESSESSFDNFMLKLAIKTSLSDLKDDSLTNGASPEVDLLSTSDN 1153
Query: 399 FDPTKLKHTETCEKN 443
PT K ++ E N
Sbjct: 1154 KTPTNRKRSQVSESN 1168
>Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/75 (25%), Positives = 27/75 (36%)
Frame = +3
Query: 219 LPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIEN 398
LPS D T +K FD+ LK + L D + L+ +N
Sbjct: 1094 LPSTSDEKTPTNRKRSESSESSFDNFMLKLAIKTSLSDLKDDSLTNGASPEVDLLSTSDN 1153
Query: 399 FDPTKLKHTETCEKN 443
PT K ++ E N
Sbjct: 1154 KTPTNRKRSQVSESN 1168
>Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical
protein C18D4.2b protein.
Length = 1376
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/75 (25%), Positives = 27/75 (36%)
Frame = +3
Query: 219 LPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIEN 398
LPS D T +K FD+ LK + L D + L+ +N
Sbjct: 1094 LPSTSDEKTPTNRKRSESSESSFDNFMLKLAIKTSLSDLKDDSLTNGASPEVDLLSTSDN 1153
Query: 399 FDPTKLKHTETCEKN 443
PT K ++ E N
Sbjct: 1154 KTPTNRKRSQVSESN 1168
>Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/75 (25%), Positives = 27/75 (36%)
Frame = +3
Query: 219 LPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIEN 398
LPS D T +K FD+ LK + L D + L+ +N
Sbjct: 1094 LPSTSDEKTPTNRKRSESSESSFDNFMLKLAIKTSLSDLKDDSLTNGASPEVDLLSTSDN 1153
Query: 399 FDPTKLKHTETCEKN 443
PT K ++ E N
Sbjct: 1154 KTPTNRKRSQVSESN 1168
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +1
Query: 4 PADESQSDXVAECTXLLSPSSSKIX*FTMACSVXXHSLPXKPSPRSPQT*RVSSKASTPA 183
P+DES+ + T ++ +I + A S+ P S +P T + +STP
Sbjct: 525 PSDESEQEAPGPSTDQVTSEEQEIPATSSAPSIFRTESP-STSSTAPSTSSPVTASSTPT 583
Query: 184 VSVTSTP 204
S T TP
Sbjct: 584 TSSTRTP 590
>Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical
protein T23F11.3b protein.
Length = 366
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -1
Query: 348 RLCPEAGSSPESRCASAGSNQTSQCRRIKTSGSSQWRRL 232
R P++GSS E+ + + + S R + TS SSQ+ ++
Sbjct: 73 RSLPKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical
protein T23F11.3a protein.
Length = 356
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -1
Query: 348 RLCPEAGSSPESRCASAGSNQTSQCRRIKTSGSSQWRRL 232
R P++GSS E+ + + + S R + TS SSQ+ ++
Sbjct: 73 RSLPKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>AF100307-11|AAC68929.1| 304|Caenorhabditis elegans Hypothetical
protein T12B5.3 protein.
Length = 304
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +1
Query: 580 ITSFIFVFVQWQPCLGNGDVQQPRILFKS*R*VTPYANKQRVDAINRSNTDN 735
ITSFI F++ + C+ ++ R+LF + P+ N + ++ I S TDN
Sbjct: 131 ITSFIN-FLKAKDCIHVKEIHFNRLLFDDILSILPFFNAKVLENIKLSETDN 181
>Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical
protein C28D4.1 protein.
Length = 437
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 318 ESRCASAGSNQTSQCRRIKTSGSSQWRRLQQTEAQSFHWCR 196
+S A + + C R K + +S R L EA F+WCR
Sbjct: 172 DSEVLQAIKDPSQVCARTKINWNSHSRPLITIEALRFNWCR 212
>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical
protein F59A6.5 protein.
Length = 1286
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/93 (21%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = +3
Query: 189 RDVDTNEKIVLPSAEDVATEKTQKSLFDGIEK-FDSSQLKHTETQEKNPLPDKDAIEAEK 365
R++ + ++ E + KT+ F+ I+K +S++ + + TQEK K I A++
Sbjct: 387 RELQSLTSLMAERDEQIEELKTKMFSFEMIKKDHESAKNELSRTQEKLDQMGKHLIMADQ 446
Query: 366 EKNKFLNGIENFDPTKLKHTETCEKNPLPTKDV 464
+ + F + E+ + ++ + E C + + +D+
Sbjct: 447 QCSTFKSLKESAEGSRRRAIEQCNEMVVRIRDL 479
>U29488-3|AAA68772.1| 221|Caenorhabditis elegans Hypothetical
protein C56C10.4 protein.
Length = 221
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = -1
Query: 399 SSRCRSGICSFPSPLR*RLCPEAGSSPESRCASAGSNQTSQCRRIKTSGSSQ 244
S C G C P P C AG P C S G +T R+ +G+ Q
Sbjct: 25 SGTCGLGPCFNPLPALPSPCASAGCGPGFSCGSYGCYRTK--ARVHAAGTHQ 74
>U13876-14|AAA21168.1| 2500|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 1 protein.
Length = 2500
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = +2
Query: 8 PMSRSPTXSLSARIFXPLPHQKSXDSQW-PAPCXXTPSLXSPPQG----RHRPEESARRL 172
P S SP+ + + PL +++ +S W AP PS PQ R + +E A +
Sbjct: 804 PSSMSPSTQMMRSLIPPLTQRQNSNSGWHAAPAPQRPSGPPTPQQQMDFRGQIQEFAPQG 863
Query: 173 QHQL 184
HQL
Sbjct: 864 PHQL 867
>AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear receptor
NHR-100 protein.
Length = 437
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 318 ESRCASAGSNQTSQCRRIKTSGSSQWRRLQQTEAQSFHWCR 196
+S A + + C R K + +S R L EA F+WCR
Sbjct: 172 DSEVLQAIKDPSQVCARTKINWNSHSRPLITIEALRFNWCR 212
>AY204184-1|AAO39188.1| 353|Caenorhabditis elegans nuclear receptor
NHR-100 protein.
Length = 353
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 318 ESRCASAGSNQTSQCRRIKTSGSSQWRRLQQTEAQSFHWCR 196
+S A + + C R K + +S R L EA F+WCR
Sbjct: 88 DSEVLQAIKDPSQVCARTKINWNSHSRPLITIEALRFNWCR 128
>AF022981-2|AAG24200.1| 236|Caenorhabditis elegans Hypothetical
protein W03F9.2a protein.
Length = 236
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 303 KHTETQEKNPLPDKDAIEAEKEKNKFLNGIE--NFD 404
KHTET+++ P +K A+K N L +E N+D
Sbjct: 192 KHTETEKEAPPQEKSVTNAQKPGNPALLSLESRNYD 227
>Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical
protein C33G3.6 protein.
Length = 624
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +3
Query: 276 IEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPT 455
IE+F K T ++N ++ E++ E+ +LN I +F + H LP+
Sbjct: 98 IEQFFGENQKSTRNSDQNAKNHEEDPESDDEETAYLNLIRSFKKEESMHDLKNASGKLPS 157
Query: 456 KD 461
+
Sbjct: 158 SN 159
>U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical
protein R144.2a protein.
Length = 823
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/67 (25%), Positives = 26/67 (38%)
Frame = +2
Query: 5 RPMSRSPTXSLSARIFXPLPHQKSXDSQWPAPCXXTPSLXSPPQGRHRPEESARRLQHQL 184
RP + PT + + F P+ P P P + +PP P + ++ QL
Sbjct: 296 RPKTLKPTSVIGSHAFAPVAAPIRPMIPVPPPVSVAPFVPAPPLSSAPPFQHPQQHHPQL 355
Query: 185 SP*RRHQ 205
P HQ
Sbjct: 356 PPPPVHQ 362
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,063,529
Number of Sequences: 27780
Number of extensions: 364937
Number of successful extensions: 1283
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1278
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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