Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_K17
(658 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 42 4e-04
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 42 4e-04
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 38 0.006
U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical pr... 31 0.72
U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z81593-10|CAI94504.1| 349|Caenorhabditis elegans Hypothetical p... 28 6.7
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z81542-9|CAI79191.1| 400|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z81542-8|CAB04417.2| 402|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 27 8.9
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 27 8.9
AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain... 27 8.9
AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain... 27 8.9
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 27 8.9
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 27 8.9
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 27 8.9
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 27 8.9
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 27 8.9
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2
Query: 410 CERVYAPVCASDGQTYVNECRMNCKNSLRDPKERVFVKRYGRC 538
CE V PVCA++G+T+ NEC M K+ + K + VK G C
Sbjct: 397 CEDVMRPVCATNGETFDNECEMKKKSC--ETKSMIKVKHQGTC 437
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 401 CGSCERVYAPVCASDGQTYVNECRMNCKNSLRDPKERVFVKRYGRC 538
C SC + VC SDG+TY NECR+ +N+ ++ +FVK C
Sbjct: 465 CPSCTDEFKEVCGSDGKTYSNECRL--QNAACMAQKNIFVKYNSAC 508
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 410 CERVYAPVCASDGQTYVNECRMNCKNSLRDPKERVFVKRYGRC 538
C A VC +DG+TY+NEC + + ++ K+ + V + G C
Sbjct: 323 CTMNSAHVCGTDGKTYLNECFLKLA-ACKEQKD-ILVWKRGNC 363
Score = 30.7 bits (66), Expect = 0.95
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 428 PVCASDGQTYVNECRMNCKNSLRDPKE 508
P+C SDG Y N+C +N S RD +E
Sbjct: 693 PICGSDGIVYNNQCHLN-TISCRDQRE 718
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 425 APVCASDGQTYVNECRMNCKNSLRDPKERVFVKRYGRC 538
+PVC+S G Y + C + ++ + K + VK +GRC
Sbjct: 258 SPVCSSHGVDYQSSCHL--RHHACESKTNITVKFFGRC 293
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2
Query: 410 CERVYAPVCASDGQTYVNECRMNCKNSLRDPKERVFVKRYGRC 538
CE V PVCA++G+T+ NEC M K+ + K + VK G C
Sbjct: 405 CEDVMRPVCATNGETFDNECEMKKKSC--ETKSMIKVKHQGTC 445
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 401 CGSCERVYAPVCASDGQTYVNECRMNCKNSLRDPKERVFVKRYGRC 538
C SC + VC SDG+TY NECR+ +N+ ++ +FVK C
Sbjct: 473 CPSCTDEFKEVCGSDGKTYSNECRL--QNAACMAQKNIFVKYNSAC 516
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 410 CERVYAPVCASDGQTYVNECRMNCKNSLRDPKERVFVKRYGRC 538
C A VC +DG+TY+NEC + + ++ K+ + V + G C
Sbjct: 331 CTMNSAHVCGTDGKTYLNECFLKLA-ACKEQKD-ILVWKRGNC 371
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 425 APVCASDGQTYVNECRMNCKNSLRDPKERVFVKRYGRC 538
+PVC+S G Y + C + ++ + K + VK +GRC
Sbjct: 266 SPVCSSHGVDYQSSCHL--RHHACESKTNITVKFFGRC 301
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = +2
Query: 365 TTDDLPILGELG-CGS-CERVYAPVCASDGQTYVNECRMN 478
T D + E+ C + C + Y+PVCAS+GQ VNEC ++
Sbjct: 855 TIDKFEVCNEVKECNNACPKEYSPVCASNGQNIVNECELD 894
Score = 31.1 bits (67), Expect = 0.72
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +2
Query: 410 CERVYAPVCASDGQTYVNEC 469
CE+V P+C + G+T++N+C
Sbjct: 66 CEKVGTPICDNFGETHINDC 85
Score = 31.1 bits (67), Expect = 0.72
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 419 VYAPVCASDGQTYVNECRM--NCKNSLRDPKERVFVKRYGRCVLQ 547
V++PVC ++G T+ N C M N ++ K+ + V G+C Q
Sbjct: 928 VFSPVCDTEGVTHANMCLMDQNACIQMKKNKKTIQVSYQGQCCNQ 972
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 428 PVCASDGQTYVNECRMNCKNSLRDPKERVFVKRYGRCV 541
P+CASD TY N C+ + L E +F + C+
Sbjct: 596 PICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSECL 633
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 410 CERVYAPVCASDGQTYVNECRMNC 481
C V PVC +D TY N C + C
Sbjct: 21 CPSVIRPVCGTDNVTYNNLCFLRC 44
Score = 29.1 bits (62), Expect = 2.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 428 PVCASDGQTYVNECRMNCKN 487
PVC G T++ EC +N +N
Sbjct: 700 PVCTDSGATFLTECELNIEN 719
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 410 CERVYAPVCASDGQTYVNECRMNCKNSLRDPKERVFVKRYGRC 538
C+ Y P+C ++G T+ N C + K + V G C
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSLQ-KEICESANSTIEVAYTGMC 813
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 407 SCERVYAPVCASDGQTYVNECRMNCKNSLRD 499
+C ++PVC S G T+ N C K + +
Sbjct: 817 NCPSDFSPVCDSKGSTHQNICHFGVKRCIAE 847
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 404 GSCERVYAPVCASDGQTYVNEC 469
G CE A VC S+GQT++N C
Sbjct: 1022 GECESSGA-VCDSEGQTHMNHC 1042
>U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical
protein F47E1.4 protein.
Length = 728
Score = 31.1 bits (67), Expect = 0.72
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 407 SCERVYA-PVCASDGQTYVNECRMNCKNS 490
SCE + PVC++DG Y + C C+ +
Sbjct: 529 SCENAHLYPVCSADGTAYFSPCHAGCREA 557
>U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical
protein C34F11.5 protein.
Length = 894
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +1
Query: 412 RKGLRACLRQRRADLR*RMPYEL*ELFKGSQRESVREKIRSLRTAKQ 552
RK LRA R RR +R R+ +L + ++G++R R+K R LR K+
Sbjct: 708 RKRLRAKRRLRRFIMRKRLKKKLRKRYRGAKRRRKRQKYR-LRYRKK 753
>Z81593-10|CAI94504.1| 349|Caenorhabditis elegans Hypothetical
protein T20B3.15 protein.
Length = 349
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = +2
Query: 389 GELGCGSCERVYAPVCASDGQTYVNECRMNCKNSLRDPKERVFVKRYGR--CVLQSRRFV 562
G+ GSC+ + VC Y C N N P +++ + G+ C L
Sbjct: 214 GQWASGSCDEAMSFVCELPATIYDETCVFNYDNYCYIPYDQINTSKQGQSICELSGSNLA 273
Query: 563 RLRN 574
+R+
Sbjct: 274 SIRS 277
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +2
Query: 407 SCERVYAPVCASDGQTYVNECRMNCKNSLRDPKERVFVKRYGRCVLQ 547
SC P C+S G CRMNC+N+ + + F ++Q
Sbjct: 38 SCRSTCRPTCSSSGGF---GCRMNCQNTCVNACNKQFAPTSSSSIVQ 81
>Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical
protein K01G5.2c protein.
Length = 303
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 103 LQGNKLCCNL*ITSGPGELCSATRFVSNTS 14
L+G +L C + +T GPGEL +F +T+
Sbjct: 112 LEGKQLKCIVGLTKGPGELHFLCKFSDDTA 141
>Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical
protein K01G5.2b protein.
Length = 301
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 103 LQGNKLCCNL*ITSGPGELCSATRFVSNTS 14
L+G +L C + +T GPGEL +F +T+
Sbjct: 112 LEGKQLKCIVGLTKGPGELHFLCKFSDDTA 141
>Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical
protein K01G5.2a protein.
Length = 175
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 103 LQGNKLCCNL*ITSGPGELCSATRFVSNTS 14
L+G +L C + +T GPGEL +F +T+
Sbjct: 112 LEGKQLKCIVGLTKGPGELHFLCKFSDDTA 141
>Z81542-9|CAI79191.1| 400|Caenorhabditis elegans Hypothetical
protein F49A5.5b protein.
Length = 400
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/54 (22%), Positives = 23/54 (42%)
Frame = +2
Query: 389 GELGCGSCERVYAPVCASDGQTYVNECRMNCKNSLRDPKERVFVKRYGRCVLQS 550
G+ GSC + + VC Y + C+ N N P +++ + + + S
Sbjct: 256 GQWSSGSCNEIMSFVCELPATIYDSTCKYNYNNYCYTPYDQLQISSDAQSICAS 309
>Z81542-8|CAB04417.2| 402|Caenorhabditis elegans Hypothetical
protein F49A5.5a protein.
Length = 402
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/54 (22%), Positives = 23/54 (42%)
Frame = +2
Query: 389 GELGCGSCERVYAPVCASDGQTYVNECRMNCKNSLRDPKERVFVKRYGRCVLQS 550
G+ GSC + + VC Y + C+ N N P +++ + + + S
Sbjct: 258 GQWSSGSCNEIMSFVCELPATIYDSTCKYNYNNYCYTPYDQLQISSDAQSICAS 311
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +2
Query: 410 CERVYAPVCASDGQTYVNECRMNCKNS 490
C++ AP C+ T +C+ +C+NS
Sbjct: 216 CQQQCAPQCSQQTSTNCQQCQNSCQNS 242
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 437 ASDGQTYVNECRMNCKNSLRDPKERVFVKRYGRCVLQSRRFVRLRNKKY 583
A +GQ+ ECR+ N DP RV R G+ + ++ RF+ RN Y
Sbjct: 1499 AQEGQSIRLECRLIPVN---DPTMRVTWTRNGQPLPEASRFMPARNFDY 1544
>AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain
protein protein.
Length = 175
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 103 LQGNKLCCNL*ITSGPGELCSATRFVSNTS 14
L+G +L C + +T GPGEL +F +T+
Sbjct: 112 LEGKQLKCIVGLTKGPGELHFLCKFSDDTA 141
>AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain
protein protein.
Length = 301
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 103 LQGNKLCCNL*ITSGPGELCSATRFVSNTS 14
L+G +L C + +T GPGEL +F +T+
Sbjct: 112 LEGKQLKCIVGLTKGPGELHFLCKFSDDTA 141
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 437 ASDGQTYVNECRMNCKNSLRDPKERVFVKRYGRCVLQSRRFVRLRNKKY 583
A +GQ+ ECR+ N DP RV R G+ + ++ RF+ RN Y
Sbjct: 1416 AQEGQSIRLECRLIPVN---DPTMRVTWTRNGQPLPEASRFMPARNFDY 1461
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 437 ASDGQTYVNECRMNCKNSLRDPKERVFVKRYGRCVLQSRRFVRLRNKKY 583
A +GQ+ ECR+ N DP RV R G+ + ++ RF+ RN Y
Sbjct: 1737 AQEGQSIRLECRLIPVN---DPTMRVTWTRNGQPLPEASRFMPARNFDY 1782
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 437 ASDGQTYVNECRMNCKNSLRDPKERVFVKRYGRCVLQSRRFVRLRNKKY 583
A +GQ+ ECR+ N DP RV R G+ + ++ RF+ RN Y
Sbjct: 1737 AQEGQSIRLECRLIPVN---DPTMRVTWTRNGQPLPEASRFMPARNFDY 1782
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 437 ASDGQTYVNECRMNCKNSLRDPKERVFVKRYGRCVLQSRRFVRLRNKKY 583
A +GQ+ ECR+ N DP RV R G+ + ++ RF+ RN Y
Sbjct: 1737 AQEGQSIRLECRLIPVN---DPTMRVTWTRNGQPLPEASRFMPARNFDY 1782
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 437 ASDGQTYVNECRMNCKNSLRDPKERVFVKRYGRCVLQSRRFVRLRNKKY 583
A +GQ+ ECR+ N DP RV R G+ + ++ RF+ RN Y
Sbjct: 1432 AQEGQSIRLECRLIPVN---DPTMRVTWTRNGQPLPEASRFMPARNFDY 1477
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,150,459
Number of Sequences: 27780
Number of extensions: 282196
Number of successful extensions: 802
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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