Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_K16
         (809 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.8  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   6.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   6.6  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 587 RPLNSETDFYAFLLKLFMGCFRN 655
           RP N   D YA +L  +  C +N
Sbjct: 715 RPANCSPDLYAVMLNCWKECPKN 737


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 609 SVSLFKGLSRYLFNISYSFVLASFFFYC 526
           +V L   L  Y F +   F+L  ++FYC
Sbjct: 124 TVHLLFLLCIYYFVVPLFFLLCIYYFYC 151


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 508 HTAHLMVSGYRRPWTSAMPGAEPS 437
           +T H+   G+  P+T  M G E S
Sbjct: 486 YTIHMGYHGFHNPFTCNMCGVECS 509


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 472 GDGNHSPSGGP 504
           G GN+ P GGP
Sbjct: 530 GSGNNQPPGGP 540


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,637
Number of Sequences: 336
Number of extensions: 3858
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)