Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_K16
         (809 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    27   0.90 
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    26   1.2  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   8.4  

>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 26.6 bits (56), Expect = 0.90
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +3

Query: 423 SGRQRLGSAPGIAEVHGRR*P 485
           +GR R G  PG AE H RR P
Sbjct: 318 AGRLRTGPVPGAAERHRRRRP 338


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 581 RLRPLNSETDFYAFLLKLFMGCFRNLGHL 667
           R+  L+S+ D Y F  KLF G    +GH+
Sbjct: 267 RMSKLSSKDDEYVFSWKLFTGWDYMIGHM 295


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 16/62 (25%), Positives = 24/62 (38%)
 Frame = -1

Query: 380 TFVCNAWAS*HHRMCSTRVSTWPLAYTSPSKSSRRIYHQIGYATH*EDPARNSVRYFCKP 201
           TFV  AW +   R      ++WPL     +K  +R      Y  H E        Y+  P
Sbjct: 536 TFVYGAWENLSKRREEDVCASWPLCGEKSAK--KRKLPSRWYLVHEESKYGAYANYYYDP 593

Query: 200 IL 195
           ++
Sbjct: 594 LV 595


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 770,721
Number of Sequences: 2352
Number of extensions: 15312
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)