Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_K16
(809 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070715-1|AAL48186.1| 654|Drosophila melanogaster SD08659p pro... 29 9.9
AF216663-1|AAF32293.1| 2263|Drosophila melanogaster guanine-nucl... 29 9.9
AF215635-1|AAF25952.1| 2263|Drosophila melanogaster Rho family g... 29 9.9
AE014296-169|AAN11457.1| 398|Drosophila melanogaster CG18214-PE... 29 9.9
AE014296-168|AAS64926.1| 658|Drosophila melanogaster CG18214-PF... 29 9.9
AE014296-167|AAF47435.3| 658|Drosophila melanogaster CG18214-PB... 29 9.9
AE014296-166|AAN11456.1| 804|Drosophila melanogaster CG18214-PD... 29 9.9
AE014296-165|AAN11455.1| 2263|Drosophila melanogaster CG18214-PC... 29 9.9
AE014296-164|AAF47436.3| 2263|Drosophila melanogaster CG18214-PA... 29 9.9
AE014134-1174|AAN10601.1| 287|Drosophila melanogaster CG17377-P... 29 9.9
AB035419-1|BAA96093.1| 2263|Drosophila melanogaster Trio protein. 29 9.9
>AY070715-1|AAL48186.1| 654|Drosophila melanogaster SD08659p
protein.
Length = 654
Score = 28.7 bits (61), Expect = 9.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 369 TNKSLDKYLVGSHNEFVTSGRQRLG 443
+NK L +Y+V +H ++ S RQ+LG
Sbjct: 431 SNKPLSEYIVSAHYQYFDSIRQKLG 455
>AF216663-1|AAF32293.1| 2263|Drosophila melanogaster
guanine-nucleotide-exchange-factorTRIO protein.
Length = 2263
Score = 28.7 bits (61), Expect = 9.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 369 TNKSLDKYLVGSHNEFVTSGRQRLG 443
+NK L +Y+V +H ++ S RQ+LG
Sbjct: 2040 SNKPLSEYIVSAHYQYFDSIRQKLG 2064
>AF215635-1|AAF25952.1| 2263|Drosophila melanogaster Rho family
guanine nucleotideexchange factor Trio protein.
Length = 2263
Score = 28.7 bits (61), Expect = 9.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 369 TNKSLDKYLVGSHNEFVTSGRQRLG 443
+NK L +Y+V +H ++ S RQ+LG
Sbjct: 2040 SNKPLSEYIVSAHYQYFDSIRQKLG 2064
>AE014296-169|AAN11457.1| 398|Drosophila melanogaster CG18214-PE,
isoform E protein.
Length = 398
Score = 28.7 bits (61), Expect = 9.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 369 TNKSLDKYLVGSHNEFVTSGRQRLG 443
+NK L +Y+V +H ++ S RQ+LG
Sbjct: 175 SNKPLSEYIVSAHYQYFDSIRQKLG 199
>AE014296-168|AAS64926.1| 658|Drosophila melanogaster CG18214-PF,
isoform F protein.
Length = 658
Score = 28.7 bits (61), Expect = 9.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 369 TNKSLDKYLVGSHNEFVTSGRQRLG 443
+NK L +Y+V +H ++ S RQ+LG
Sbjct: 435 SNKPLSEYIVSAHYQYFDSIRQKLG 459
>AE014296-167|AAF47435.3| 658|Drosophila melanogaster CG18214-PB,
isoform B protein.
Length = 658
Score = 28.7 bits (61), Expect = 9.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 369 TNKSLDKYLVGSHNEFVTSGRQRLG 443
+NK L +Y+V +H ++ S RQ+LG
Sbjct: 435 SNKPLSEYIVSAHYQYFDSIRQKLG 459
>AE014296-166|AAN11456.1| 804|Drosophila melanogaster CG18214-PD,
isoform D protein.
Length = 804
Score = 28.7 bits (61), Expect = 9.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 369 TNKSLDKYLVGSHNEFVTSGRQRLG 443
+NK L +Y+V +H ++ S RQ+LG
Sbjct: 581 SNKPLSEYIVSAHYQYFDSIRQKLG 605
>AE014296-165|AAN11455.1| 2263|Drosophila melanogaster CG18214-PC,
isoform C protein.
Length = 2263
Score = 28.7 bits (61), Expect = 9.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 369 TNKSLDKYLVGSHNEFVTSGRQRLG 443
+NK L +Y+V +H ++ S RQ+LG
Sbjct: 2040 SNKPLSEYIVSAHYQYFDSIRQKLG 2064
>AE014296-164|AAF47436.3| 2263|Drosophila melanogaster CG18214-PA,
isoform A protein.
Length = 2263
Score = 28.7 bits (61), Expect = 9.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 369 TNKSLDKYLVGSHNEFVTSGRQRLG 443
+NK L +Y+V +H ++ S RQ+LG
Sbjct: 2040 SNKPLSEYIVSAHYQYFDSIRQKLG 2064
>AE014134-1174|AAN10601.1| 287|Drosophila melanogaster CG17377-PC,
isoform C protein.
Length = 287
Score = 28.7 bits (61), Expect = 9.9
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -2
Query: 472 PWTSAMPGAEPSRCLPLVTNSLCEPTRYLSKLLFVTLGHLSITECVAHGSQPGHLL 305
P S P PS C + + +++L +L VTL H+ + E AH + P ++
Sbjct: 183 PGPSTCPPVCPSACPSVTALGVRRTSQHLEHVLVVTL-HVLLQELYAHYADPSTMI 237
>AB035419-1|BAA96093.1| 2263|Drosophila melanogaster Trio protein.
Length = 2263
Score = 28.7 bits (61), Expect = 9.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 369 TNKSLDKYLVGSHNEFVTSGRQRLG 443
+NK L +Y+V +H ++ S RQ+LG
Sbjct: 2040 SNKPLSEYIVSAHYQYFDSIRQKLG 2064
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,775,108
Number of Sequences: 53049
Number of extensions: 675224
Number of successful extensions: 1545
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1545
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3798466620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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