Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_K15
         (840 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    24   1.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   4.0  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   7.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   7.0  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   9.2  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 9/61 (14%)
 Frame = -2

Query: 479 SLIHPQVNKEWSSI-----FS*KHIPPRYLRSKIF*KKL----GSVLNIKGIQSIFIFQR 327
           SLI  Q  ++WSS+     F  K +  R  +S++F + +    GS+L + G+  I+IF  
Sbjct: 38  SLIFNQ--EQWSSLNKNFQFIDKKLNNRNSKSRVFYENVNFQFGSILALFGVVQIYIFSG 95

Query: 326 F 324
           F
Sbjct: 96  F 96


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 485 PRSLIHPQVNKEWSSIFS*KHIP 417
           PR+   PQV  +W S     H+P
Sbjct: 265 PRTDFKPQVLPQWPSPIGASHLP 287


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = -1

Query: 840 FRPV*ECGVXSCRAGEGSSKVCEXSGFXIRKE 745
           F P   CG   C  G   +  C+  GF   +E
Sbjct: 57  FGPSICCGPFGCLVGTPETLRCQREGFFHERE 88


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 648 YWLFALYVAYHV 683
           YWLF  ++ +HV
Sbjct: 599 YWLFHCHIEFHV 610


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 749 LRIXKPXHSHTFEEPSPARHE 811
           L I    + HTF+   PA+H+
Sbjct: 253 LTIGLAFYGHTFQLADPAQHD 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,790
Number of Sequences: 336
Number of extensions: 4293
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)