Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_K13
(458 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72; Fungi/... 111 9e-24
UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6; Metazoa... 110 2e-23
UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella ve... 88 7e-17
UniRef50_Q0ULI2 Cluster: Predicted protein; n=12; Pezizomycotina... 80 3e-14
UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila melanogaster|... 79 6e-14
UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22; Fung... 73 2e-12
UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4; Bilater... 71 1e-11
UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyosteli... 62 4e-09
UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22; Viri... 61 1e-08
UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=... 57 2e-07
UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes va... 57 2e-07
UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2; ... 55 6e-07
UniRef50_Q10353 Cluster: Ribosome biogenesis protein rlp24; n=2;... 55 8e-07
UniRef50_P54064 Cluster: 50S ribosomal protein L24e; n=10; Eurya... 55 8e-07
UniRef50_UPI00006CCD09 Cluster: Ribosomal protein L24e containin... 53 3e-06
UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177, w... 53 3e-06
UniRef50_UPI000049899D Cluster: 60S ribosomal protein L24; n=3; ... 53 3e-06
UniRef50_Q07915 Cluster: Ribosome biogenesis protein RLP24; n=10... 52 5e-06
UniRef50_Q6CNW3 Cluster: Ribosome biogenesis protein RLP24; n=13... 52 5e-06
UniRef50_O22165 Cluster: Probable ribosome biogenesis protein RL... 52 8e-06
UniRef50_Q7RRK8 Cluster: Ribosomal protein L24e, putative; n=5; ... 50 2e-05
UniRef50_Q6JWX2 Cluster: 60S ribosomal protein L24; n=2; Deutero... 50 2e-05
UniRef50_Q5CXQ6 Cluster: 60S ribosomal protein L24; n=2; Cryptos... 50 2e-05
UniRef50_Q4UCL2 Cluster: 60S ribosomal protein L24/L30, putative... 50 2e-05
UniRef50_Q9VGN9 Cluster: Probable ribosome biogenesis protein RL... 50 2e-05
UniRef50_Q3U5N8 Cluster: Bone marrow macrophage cDNA, RIKEN full... 50 3e-05
UniRef50_Q9UHA3 Cluster: Probable ribosome biogenesis protein RL... 50 3e-05
UniRef50_Q86B05 Cluster: Probable ribosome biogenesis protein RL... 48 7e-05
UniRef50_Q7R0M0 Cluster: GLP_154_26137_25568; n=1; Giardia lambl... 48 1e-04
UniRef50_Q5CFK2 Cluster: Ribosomal protein L24e; n=2; Cryptospor... 48 1e-04
UniRef50_A2ENX8 Cluster: Ribosomal protein L24e, putative; n=1; ... 48 1e-04
UniRef50_Q4P385 Cluster: Putative uncharacterized protein; n=1; ... 48 1e-04
UniRef50_Q4Q1W6 Cluster: Ribosomal protein L24, putative; n=6; T... 46 3e-04
UniRef50_A7AR75 Cluster: 60S ribosomal protein L24, putative; n=... 46 4e-04
UniRef50_Q7R991 Cluster: Ribosomal protein L24e, putative; n=3; ... 46 5e-04
UniRef50_Q4XZ61 Cluster: 60S ribosomal protein L24, putative; n=... 46 5e-04
UniRef50_A0DJ05 Cluster: Chromosome undetermined scaffold_52, wh... 46 5e-04
UniRef50_O29492 Cluster: 50S ribosomal protein L24e; n=7; cellul... 45 7e-04
UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4; Euroti... 44 0.001
UniRef50_Q8SSF6 Cluster: Probable ribosome biogenesis protein RL... 44 0.001
UniRef50_Q7QRA3 Cluster: GLP_2_13062_12754; n=1; Giardia lamblia... 43 0.003
UniRef50_A6RB37 Cluster: Ribosome biogenesis protein RLP24; n=1;... 43 0.004
UniRef50_Q8TVE8 Cluster: 50S ribosomal protein L24e; n=5; Archae... 42 0.006
UniRef50_Q8PU76 Cluster: 50S ribosomal protein L24e; n=11; Eurya... 41 0.015
UniRef50_Q17606 Cluster: Probable ribosome biogenesis protein RL... 40 0.034
UniRef50_A2ZTR3 Cluster: Putative uncharacterized protein; n=3; ... 38 0.079
UniRef50_A2DJQ1 Cluster: Ribosomal protein L24e, putative; n=1; ... 38 0.079
UniRef50_A7DR44 Cluster: Ribosomal protein L24E; n=1; Candidatus... 35 0.97
UniRef50_P14116 Cluster: 50S ribosomal protein L24e; n=6; Haloba... 35 0.97
UniRef50_A3H7X1 Cluster: Ribosomal protein L24E; n=2; Thermoprot... 34 1.3
UniRef50_A0RUB6 Cluster: Ribosomal protein L24E; n=1; Cenarchaeu... 33 2.2
UniRef50_Q96AX6 Cluster: DENND1B protein; n=2; Homo sapiens|Rep:... 32 5.2
>UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24 -
Homo sapiens (Human)
Length = 157
Score = 111 bits (266), Expect = 9e-24
Identities = 50/86 (58%), Positives = 58/86 (67%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXX 181
PGHG+ + DGK F FLN+KCE+A L +RNPR++ WTVLYRRK KKGQ EE
Sbjct: 15 PGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRR 74
Query: 182 XXXXXXXIVGASLSDIMAKRNMKPEV 259
I GASL+DIMAKRN KPEV
Sbjct: 75 AVKFQRAITGASLADIMAKRNQKPEV 100
>UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6;
Metazoa|Rep: 60S ribosomal protein L24 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 157
Score = 110 bits (264), Expect = 2e-23
Identities = 49/86 (56%), Positives = 59/86 (68%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXX 181
PGHG+ +VDGK F FLN+KCE+A L +RNPR++ WTVLYRRK KKGQ EE
Sbjct: 15 PGHGRRYARVDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEVSKKRTRR 74
Query: 182 XXXXXXXIVGASLSDIMAKRNMKPEV 259
I GASL++I+AKRN KPEV
Sbjct: 75 AVKFQRAITGASLAEILAKRNQKPEV 100
>UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 143
Score = 88.2 bits (209), Expect = 7e-17
Identities = 42/74 (56%), Positives = 48/74 (64%)
Frame = +2
Query: 38 KTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXXIVGAS 217
K F FLN +CE A LMRRNPR+VTWTVLYR K KKG +EE + GAS
Sbjct: 7 KVFNFLNKRCERALLMRRNPREVTWTVLYRCKHKKGTQEEVSKKRTRRNIKFQRSVQGAS 66
Query: 218 LSDIMAKRNMKPEV 259
L +I+AKRN KPEV
Sbjct: 67 LDNILAKRNQKPEV 80
>UniRef50_Q0ULI2 Cluster: Predicted protein; n=12;
Pezizomycotina|Rep: Predicted protein - Phaeosphaeria
nodorum (Septoria nodorum)
Length = 161
Score = 79.8 bits (188), Expect = 3e-14
Identities = 38/85 (44%), Positives = 47/85 (55%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXX 181
PG GK ++ D K F F N K E+ L R+NPRK++WT LYRR KKG EE
Sbjct: 15 PGKGKLYIRGDSKIFRFQNGKTESLFLQRKNPRKISWTTLYRRMHKKGISEEVAKKRTRR 74
Query: 182 XXXXXXXIVGASLSDIMAKRNMKPE 256
IVGASL I +R+ +PE
Sbjct: 75 TVKHQRAIVGASLDVIKERRSQRPE 99
>UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila
melanogaster|Rep: RH14088p - Drosophila melanogaster
(Fruit fly)
Length = 123
Score = 78.6 bits (185), Expect = 6e-14
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = +2
Query: 83 MRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 259
M+RNPRKVTWTVLYRRK +KG EEE IVGASL++I+AKRNMKPEV
Sbjct: 1 MKRNPRKVTWTVLYRRKHRKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEV 59
>UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 155
Score = 73.3 bits (172), Expect = 2e-12
Identities = 36/86 (41%), Positives = 46/86 (53%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXX 181
PG G V+ D K F F NSK + R+NPR++ WTVL+R+ KKG EE
Sbjct: 15 PGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHKKGITEEVAKKRSRK 74
Query: 182 XXXXXXXIVGASLSDIMAKRNMKPEV 259
I GASL I +R++KPEV
Sbjct: 75 TVKAQRPITGASLDLIKERRSLKPEV 100
>UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4;
Bilateria|Rep: 60S ribosomal protein L24 -
Caenorhabditis elegans
Length = 159
Score = 70.9 bits (166), Expect = 1e-11
Identities = 37/84 (44%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK---GQEEEXXXXX 172
PGHGK +V+ DGK FL+ K +RRNPR + WTVLYR K KK GQE+
Sbjct: 15 PGHGKRLVRTDGKVQIFLSGKALKGAKLRRNPRDIRWTVLYRIKNKKGTHGQEQVTRKKT 74
Query: 173 XXXXXXXXXXIVGASLSDIMAKRN 244
+ G SL I+AKRN
Sbjct: 75 KKSVQVVNRAVAGLSLDAILAKRN 98
>UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L24 -
Dictyostelium discoideum AX4
Length = 127
Score = 62.5 bits (145), Expect = 4e-09
Identities = 31/86 (36%), Positives = 42/86 (48%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXX 181
P G V+ D K F F+N+K E+ + NPR + W+++YRR +K +
Sbjct: 15 PARGMKFVRGDSKVFHFINTKVESLFFRKINPRDIRWSMVYRRIYKNTTTDVSAKKKARK 74
Query: 182 XXXXXXXIVGASLSDIMAKRNMKPEV 259
IVGASL I KR KPEV
Sbjct: 75 TKKVERNIVGASLEVIQQKRAQKPEV 100
>UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22;
Viridiplantae|Rep: 60S ribosomal protein L24-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 164
Score = 61.3 bits (142), Expect = 1e-08
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXX 181
PG G ++ D + F FLNSKC+ + P K+ WT +YR++ KK +E
Sbjct: 17 PGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQHKKDAAQEAVKRRRRA 76
Query: 182 XXX-XXXXIVGASLSDIMAKRNMKPEV 259
IVGA+L I KR KPEV
Sbjct: 77 TKKPYSRSIVGATLEVIQKKRAEKPEV 103
>UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L24, putative -
Theileria parva
Length = 159
Score = 57.2 bits (132), Expect = 2e-07
Identities = 29/81 (35%), Positives = 39/81 (48%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXX 181
PG GK V DGK + F+N K A H + P K+ W + +R+ KK Q E
Sbjct: 26 PGRGKKFVARDGKVYFFINGKSAAFHKRKVKPAKLKWNLAWRKANKKFQTELFNRKRSKK 85
Query: 182 XXXXXXXIVGASLSDIMAKRN 244
IVG SL D+ +KR+
Sbjct: 86 TSRPQKAIVGLSLDDLKSKRS 106
>UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes
vannus|Rep: Ribosomal protein L24 - Euplotes vannus
Length = 155
Score = 56.8 bits (131), Expect = 2e-07
Identities = 27/81 (33%), Positives = 40/81 (49%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXX 181
PG G V+ DG+TF FL+ K + H + +TWT ++RRK +KG +
Sbjct: 17 PGRGHRFVRKDGRTFFFLSRKTRSLHFQKVKTSDLTWTPMWRRKNRKGAYAKAARVRTKR 76
Query: 182 XXXXXXXIVGASLSDIMAKRN 244
+VG SL++I RN
Sbjct: 77 TTRKMKAVVGMSLAEINRIRN 97
>UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L24 - Entamoeba histolytica HM-1:IMSS
Length = 163
Score = 55.2 bits (127), Expect = 6e-07
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +2
Query: 11 GKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEE 157
G+ V++D K+FTF+N K L + NPRKV WT +YR+ KKGQ+ E
Sbjct: 20 GRKYVRLDLKSFTFINKKSLMQFLRKTNPRKVFWTAIYRQLNKKGQQNE 68
>UniRef50_Q10353 Cluster: Ribosome biogenesis protein rlp24; n=2;
cellular organisms|Rep: Ribosome biogenesis protein
rlp24 - Schizosaccharomyces pombe (Fission yeast)
Length = 192
Score = 54.8 bits (126), Expect = 8e-07
Identities = 24/47 (51%), Positives = 27/47 (57%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 142
PGHG V+ D K F F SKC M+RNPRKV WT YR+ K
Sbjct: 15 PGHGIMFVRNDSKVFRFCRSKCHKNFKMKRNPRKVAWTKAYRKAHGK 61
>UniRef50_P54064 Cluster: 50S ribosomal protein L24e; n=10;
Euryarchaeota|Rep: 50S ribosomal protein L24e -
Methanococcus jannaschii
Length = 70
Score = 54.8 bits (126), Expect = 8e-07
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLY---RRKFKKGQEEE 157
PG GK +V+ DG F +SKCE ++ M RNPRK+ WT +Y + + KK QE +
Sbjct: 16 PGKGKMVVEKDGTVLYFCSSKCEKSYRMGRNPRKLKWTKVYQDMKAELKKAQESQ 70
>UniRef50_UPI00006CCD09 Cluster: Ribosomal protein L24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein L24e containing protein - Tetrahymena
thermophila SB210
Length = 158
Score = 53.2 bits (122), Expect = 3e-06
Identities = 25/82 (30%), Positives = 40/82 (48%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXX 181
PG G+ + DG+ F FL K + L + +K+TWT+ RR +KK + +
Sbjct: 17 PGRGQRFIAKDGRGFFFLTKKAKCLSLRKVKAQKITWTIARRRLWKKVKATDIAQKKKKR 76
Query: 182 XXXXXXXIVGASLSDIMAKRNM 247
IVG SL +I ++N+
Sbjct: 77 NVTVARAIVGISLEEINRRKNL 98
>UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=7; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_177,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 162
Score = 53.2 bits (122), Expect = 3e-06
Identities = 27/80 (33%), Positives = 39/80 (48%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXX 181
PGHG+ V DG+ F +LN K A + +++ WTV +RR KK + +E
Sbjct: 17 PGHGRRFVAKDGRLFYYLNQKSRAFSARKIKSQEIQWTVAWRRLNKKIKTDEGAKKRRIR 76
Query: 182 XXXXXXXIVGASLSDIMAKR 241
IVG SL +I +R
Sbjct: 77 NLKVQRAIVGISLEEIRRRR 96
>UniRef50_UPI000049899D Cluster: 60S ribosomal protein L24; n=3;
cellular organisms|Rep: 60S ribosomal protein L24 -
Entamoeba histolytica HM-1:IMSS
Length = 179
Score = 52.8 bits (121), Expect = 3e-06
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 127
PGHG V+ D K F F SKC + M+RNPRK WT YR
Sbjct: 15 PGHGMMFVRNDAKVFWFCRSKCHKSFKMKRNPRKFKWTKAYR 56
>UniRef50_Q07915 Cluster: Ribosome biogenesis protein RLP24; n=10;
Ascomycota|Rep: Ribosome biogenesis protein RLP24 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 199
Score = 52.4 bits (120), Expect = 5e-06
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 130
PGHG V+ D K F F SKC A RRNPRK+ WT +R+
Sbjct: 15 PGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRK 57
>UniRef50_Q6CNW3 Cluster: Ribosome biogenesis protein RLP24; n=13;
Ascomycota|Rep: Ribosome biogenesis protein RLP24 -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 198
Score = 52.4 bits (120), Expect = 5e-06
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 130
PGHG V+ D K F F SKC A RRNPRK+ WT +R+
Sbjct: 15 PGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRK 57
>UniRef50_O22165 Cluster: Probable ribosome biogenesis protein
RLP24; n=3; core eudicotyledons|Rep: Probable ribosome
biogenesis protein RLP24 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 159
Score = 51.6 bits (118), Expect = 8e-06
Identities = 23/52 (44%), Positives = 28/52 (53%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEE 157
PGHG V+ D K F F SKC M+RNPRKV WT +R K ++
Sbjct: 15 PGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAFRAAHGKDMTKD 66
>UniRef50_Q7RRK8 Cluster: Ribosomal protein L24e, putative; n=5;
Plasmodium|Rep: Ribosomal protein L24e, putative -
Plasmodium yoelii yoelii
Length = 213
Score = 50.4 bits (115), Expect = 2e-05
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 142
PGHG ++ D + F F SKC + NPRKV WT +YR++ K
Sbjct: 15 PGHGIHFIRNDARVFRFCRSKCHKHFKAKHNPRKVKWTKIYRKERNK 61
>UniRef50_Q6JWX2 Cluster: 60S ribosomal protein L24; n=2;
Deuterostomia|Rep: 60S ribosomal protein L24 -
Oikopleura dioica (Tunicate)
Length = 165
Score = 50.0 bits (114), Expect = 2e-05
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 142
PGHG V+ D K F F +KC ++NPRK+ WT YR+ K
Sbjct: 15 PGHGTVFVRNDSKQFRFCTAKCNKMFKKKKNPRKIKWTKAYRKAHGK 61
>UniRef50_Q5CXQ6 Cluster: 60S ribosomal protein L24; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L24 -
Cryptosporidium parvum Iowa II
Length = 202
Score = 50.0 bits (114), Expect = 2e-05
Identities = 21/43 (48%), Positives = 24/43 (55%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 130
PGHG V+ D K F F SKC M+ NPRK WT YR+
Sbjct: 20 PGHGVTFVRNDAKIFRFCRSKCHRHFKMKHNPRKSKWTKAYRK 62
>UniRef50_Q4UCL2 Cluster: 60S ribosomal protein L24/L30, putative;
n=2; Theileria|Rep: 60S ribosomal protein L24/L30,
putative - Theileria annulata
Length = 187
Score = 50.0 bits (114), Expect = 2e-05
Identities = 21/43 (48%), Positives = 24/43 (55%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 130
PGHG V+ D K F F SKC + NPRK+ WT YRR
Sbjct: 15 PGHGIVFVRNDSKIFRFCRSKCHRHFKAKHNPRKIKWTKAYRR 57
>UniRef50_Q9VGN9 Cluster: Probable ribosome biogenesis protein
RLP24; n=10; Coelomata|Rep: Probable ribosome biogenesis
protein RLP24 - Drosophila melanogaster (Fruit fly)
Length = 191
Score = 50.0 bits (114), Expect = 2e-05
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 130
PGHG V+ D K F F KC A ++NPRKV WT YR+
Sbjct: 15 PGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRK 57
>UniRef50_Q3U5N8 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830167A21
product:Similar to 60S ribosomal protein L30 isolog,
full insert sequence; n=3; Murinae|Rep: Bone marrow
macrophage cDNA, RIKEN full-length enriched library,
clone:I830167A21 product:Similar to 60S ribosomal
protein L30 isolog, full insert sequence - Mus musculus
(Mouse)
Length = 171
Score = 49.6 bits (113), Expect = 3e-05
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 130
PGHG V+ D K F F SKC +RNPRKV WT +R+
Sbjct: 15 PGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>UniRef50_Q9UHA3 Cluster: Probable ribosome biogenesis protein
RLP24; n=35; Euteleostomi|Rep: Probable ribosome
biogenesis protein RLP24 - Homo sapiens (Human)
Length = 163
Score = 49.6 bits (113), Expect = 3e-05
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 130
PGHG V+ D K F F SKC +RNPRKV WT +R+
Sbjct: 15 PGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>UniRef50_Q86B05 Cluster: Probable ribosome biogenesis protein
RLP24; n=2; Eukaryota|Rep: Probable ribosome biogenesis
protein RLP24 - Dictyostelium discoideum (Slime mold)
Length = 164
Score = 48.4 bits (110), Expect = 7e-05
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 130
PGHG V+ D K F F SKC ++RNPRK WT +R+
Sbjct: 15 PGHGVMFVRNDCKQFRFCRSKCHKNFKLKRNPRKTRWTKAFRK 57
>UniRef50_Q7R0M0 Cluster: GLP_154_26137_25568; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_154_26137_25568 - Giardia lamblia
ATCC 50803
Length = 189
Score = 48.0 bits (109), Expect = 1e-04
Identities = 21/42 (50%), Positives = 24/42 (57%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 127
PG G V+ D + F F SKC M+RNPRKV WT YR
Sbjct: 16 PGKGICFVRNDSRVFRFCTSKCHRNFKMKRNPRKVRWTKTYR 57
>UniRef50_Q5CFK2 Cluster: Ribosomal protein L24e; n=2;
Cryptosporidium|Rep: Ribosomal protein L24e -
Cryptosporidium hominis
Length = 133
Score = 47.6 bits (108), Expect = 1e-04
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK-GQEEEXXXXXXX 178
PG G+ V DG+ TFLN KC + + P K+ W+V +RR KK +
Sbjct: 22 PGRGRKFVARDGRVSTFLNQKCASLFHQKIRPVKLKWSVGWRRMNKKLTNQGATSKRRNK 81
Query: 179 XXXXXXXXIVGASLSDIMAKR 241
I G SL DI KR
Sbjct: 82 KTVRLHKAIEGLSLDDIKQKR 102
>UniRef50_A2ENX8 Cluster: Ribosomal protein L24e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24e,
putative - Trichomonas vaginalis G3
Length = 178
Score = 47.6 bits (108), Expect = 1e-04
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 142
PGHG V+ D K F F SKC + ++NPRK +WT +R K
Sbjct: 16 PGHGTVYVRNDCKVFRFCKSKCRKFWMKKKNPRKFSWTKAFRAAMGK 62
>UniRef50_Q4P385 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 181
Score = 47.6 bits (108), Expect = 1e-04
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 130
PG G V+ D K F F SKC ++RNPRKV WT +R+
Sbjct: 15 PGKGITFVRNDAKIFKFCKSKCHKNFKLKRNPRKVRWTKAFRK 57
>UniRef50_Q4Q1W6 Cluster: Ribosomal protein L24, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L24, putative -
Leishmania major
Length = 124
Score = 46.4 bits (105), Expect = 3e-04
Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Frame = +2
Query: 2 PGHGKXMVKV----DGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXX 169
PGHG+ V TF KC A ++ ++NPR + WT YRR +K +
Sbjct: 15 PGHGRRYVPFAFLSTKPVLTFSRPKCFALYMRKKNPRFIPWTRTYRRIHRKTTTDRVNRR 74
Query: 170 XXXXXXXXXXXIVGASLSDIMAKRNMKPE 256
IVGA LS I R + E
Sbjct: 75 RAARAVRVQRAIVGADLSYIQEVRAARKE 103
>UniRef50_A7AR75 Cluster: 60S ribosomal protein L24, putative; n=1;
Babesia bovis|Rep: 60S ribosomal protein L24, putative -
Babesia bovis
Length = 192
Score = 46.0 bits (104), Expect = 4e-04
Identities = 21/47 (44%), Positives = 24/47 (51%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 142
PGHG V+ D K F F SKC + NPRK+ WT RR K
Sbjct: 15 PGHGIVFVRNDSKIFRFCRSKCHKHFKAKHNPRKLKWTKAARRMHGK 61
>UniRef50_Q7R991 Cluster: Ribosomal protein L24e, putative; n=3;
Plasmodium|Rep: Ribosomal protein L24e, putative -
Plasmodium yoelii yoelii
Length = 178
Score = 45.6 bits (103), Expect = 5e-04
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXX 181
PG G+ + DGK + +L+SK + L ++ K+ WT +RR KK + E
Sbjct: 22 PGRGQKYIAKDGKVYFYLSSKFASLALQKKKAAKLRWTQTWRRNNKKTKVEATQRRRYKK 81
Query: 182 XXXXXXXIVGASLSDIMAKR 241
+ G S+ DI ++
Sbjct: 82 TIKVQKAVCGLSVEDIRNRK 101
>UniRef50_Q4XZ61 Cluster: 60S ribosomal protein L24, putative; n=2;
Plasmodium (Vinckeia)|Rep: 60S ribosomal protein L24,
putative - Plasmodium chabaudi
Length = 130
Score = 45.6 bits (103), Expect = 5e-04
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXX 181
PG G+ + DGK + +L+SK + L ++ K+ WT +RR KK + E
Sbjct: 22 PGRGQKYIAKDGKVYFYLSSKFASLALQKKKAAKLRWTQTWRRNNKKTKVEATQRRRYKK 81
Query: 182 XXXXXXXIVGASLSDIMAKR 241
+ G S+ DI ++
Sbjct: 82 TIKVQKAVCGLSVEDIRNRK 101
>UniRef50_A0DJ05 Cluster: Chromosome undetermined scaffold_52, whole
genome shotgun sequence; n=4; Eukaryota|Rep: Chromosome
undetermined scaffold_52, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 171
Score = 45.6 bits (103), Expect = 5e-04
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 130
PGHG V+ D K F F SKC + NPRK WT +R+
Sbjct: 15 PGHGIVFVRNDSKMFRFCRSKCHRHFKAQHNPRKTRWTKAFRK 57
>UniRef50_O29492 Cluster: 50S ribosomal protein L24e; n=7; cellular
organisms|Rep: 50S ribosomal protein L24e -
Archaeoglobus fulgidus
Length = 58
Score = 45.2 bits (102), Expect = 7e-04
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYRR 130
PG GK V+ DG+ F F + KCE L ++R PRK+ WT Y R
Sbjct: 15 PGTGKMYVRRDGRVFYFCSGKCEKNMLKLKRKPRKLKWTKHYSR 58
>UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4;
Eurotiomycetidae|Rep: 60S ribosomal protein L24b -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 188
Score = 44.4 bits (100), Expect = 0.001
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 127
P G V+ D K+F F SKC A M+R PRK+ WT +R
Sbjct: 15 PSKGITFVRNDAKSFRFCRSKCHANFKMKRQPRKLKWTKTHR 56
>UniRef50_Q8SSF6 Cluster: Probable ribosome biogenesis protein
RLP24; n=1; Encephalitozoon cuniculi|Rep: Probable
ribosome biogenesis protein RLP24 - Encephalitozoon
cuniculi
Length = 155
Score = 44.4 bits (100), Expect = 0.001
Identities = 20/46 (43%), Positives = 23/46 (50%)
Frame = +2
Query: 5 GHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 142
GHG V+ D K F F KC R NPRKV WT + R+ K
Sbjct: 16 GHGTIYVRNDAKVFRFCRPKCRKLFARRVNPRKVKWTKISRKMANK 61
>UniRef50_Q7QRA3 Cluster: GLP_2_13062_12754; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_2_13062_12754 - Giardia lamblia ATCC
50803
Length = 102
Score = 43.2 bits (97), Expect = 0.003
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 130
PG+GK M + D FLN K +L + NPRK+ WT+ RR
Sbjct: 16 PGYGKRMSRHDKVLLIFLNRKASVHYLNKWNPRKIRWTLASRR 58
>UniRef50_A6RB37 Cluster: Ribosome biogenesis protein RLP24; n=1;
Ajellomyces capsulatus NAm1|Rep: Ribosome biogenesis
protein RLP24 - Ajellomyces capsulatus NAm1
Length = 191
Score = 42.7 bits (96), Expect = 0.004
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 127
P G V+ D +TF F SKC M+R PRK+ WT +R
Sbjct: 15 PSKGITFVRNDARTFRFCRSKCHKNFKMKRQPRKLKWTKTHR 56
>UniRef50_Q8TVE8 Cluster: 50S ribosomal protein L24e; n=5;
Archaea|Rep: 50S ribosomal protein L24e - Methanopyrus
kandleri
Length = 68
Score = 41.9 bits (94), Expect = 0.006
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYR 127
PG GK VK DG F +SKCE L + R+P+KV WT +R
Sbjct: 16 PGTGKMFVKNDGTILWFCSSKCERNMLKLGRDPKKVRWTEKHR 58
>UniRef50_Q8PU76 Cluster: 50S ribosomal protein L24e; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L24e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 62
Score = 40.7 bits (91), Expect = 0.015
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 142
PG GK +K DG T+ +SKC + + R PR+ WT + + KK
Sbjct: 15 PGTGKLYIKKDGSTYFMCSSKCMSNFALGRLPRRTEWTEKGKIQLKK 61
>UniRef50_Q17606 Cluster: Probable ribosome biogenesis protein
RLP24; n=2; Caenorhabditis|Rep: Probable ribosome
biogenesis protein RLP24 - Caenorhabditis elegans
Length = 162
Score = 39.5 bits (88), Expect = 0.034
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 130
PGHG V+ D F F S+C ++NPRK+ +T RR
Sbjct: 15 PGHGIQFVRNDSTVFKFCRSRCNKLFKKKKNPRKLRFTKAARR 57
>UniRef50_A2ZTR3 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 202
Score = 38.3 bits (85), Expect = 0.079
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2
Query: 44 FTFLNSKCEAAHLMRRNPRKVTWTVLYR 127
F F SKC M+RNPRKV WT YR
Sbjct: 67 FRFCRSKCHKNFKMKRNPRKVKWTKAYR 94
>UniRef50_A2DJQ1 Cluster: Ribosomal protein L24e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24e,
putative - Trichomonas vaginalis G3
Length = 113
Score = 38.3 bits (85), Expect = 0.079
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 5 GHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 142
GHG+ ++ D F + K +RNPRK+ WT YR KK
Sbjct: 18 GHGRVHIREDKHLMAFESRKAFRMWERKRNPRKIAWTEHYRHDHKK 63
>UniRef50_A7DR44 Cluster: Ribosomal protein L24E; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L24E - Candidatus Nitrosopumilus maritimus SCM1
Length = 66
Score = 34.7 bits (76), Expect = 0.97
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 5 GHGKXMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLY 124
G G + K DG F ++KC+ L ++R+PRK WT Y
Sbjct: 18 GSGTMLAKNDGTVLWFCSAKCKKNALELKRDPRKFKWTKKY 58
>UniRef50_P14116 Cluster: 50S ribosomal protein L24e; n=6;
Halobacteriaceae|Rep: 50S ribosomal protein L24e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 67
Score = 34.7 bits (76), Expect = 0.97
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 154
PG G V DG T F +SKCE + R R + WT R + + ++E
Sbjct: 16 PGTGTMFVHKDGATTHFCSSKCENNADLGREARNLEWTDTARGEAGEAEDE 66
>UniRef50_A3H7X1 Cluster: Ribosomal protein L24E; n=2;
Thermoproteaceae|Rep: Ribosomal protein L24E -
Caldivirga maquilingensis IC-167
Length = 70
Score = 34.3 bits (75), Expect = 1.3
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 2 PGHGKXMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYRRKFKKGQEE 154
PG+G V+VDG F + +C + + M +NP+K W RR Q +
Sbjct: 15 PGYGIMYVRVDGVVLRFCSRRCFVSMVKMGKNPQKQAWVRKIRRAKSAAQSK 66
>UniRef50_A0RUB6 Cluster: Ribosomal protein L24E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24E - Cenarchaeum
symbiosum
Length = 65
Score = 33.5 bits (73), Expect = 2.2
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 5 GHGKXMVKVDGKTFTFLNSKCEA-AHLMRRNPRKVTWTVLY 124
G G K DG F +SKC +++R+PRK WT Y
Sbjct: 18 GSGTMFAKNDGTVMWFCSSKCRKNMTVLKRDPRKFKWTGKY 58
>UniRef50_Q96AX6 Cluster: DENND1B protein; n=2; Homo sapiens|Rep:
DENND1B protein - Homo sapiens (Human)
Length = 166
Score = 32.3 bits (70), Expect = 5.2
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 121 QDSPCYFTRIPPHQMGGFTF*IQECEGFSI 32
+DSP Y RIPP ++ F F I++ E F +
Sbjct: 118 EDSPAYLPRIPPGKVRRFAFCIKKLENFPV 147
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 329,228,302
Number of Sequences: 1657284
Number of extensions: 5168088
Number of successful extensions: 10219
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 10082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10216
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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