Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_K12
         (752 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0325 - 2552808-2553895,2553999-2554300,2555014-2555447           29   3.0  
08_02_0921 - 22640125-22640268,22640349-22640423,22640496-226407...    29   5.2  
08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,452...    28   9.2  
03_02_0078 + 5476288-5476626,5477474-5477670,5477750-5477885,547...    28   9.2  

>05_01_0325 - 2552808-2553895,2553999-2554300,2555014-2555447
          Length = 607

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = +2

Query: 74  YNLASCNMFSLNSINTQNQILISFSQLSCRYGN---LFKHRKQN-SLKDKHVKGKESASA 241
           +NLA C  +S   I+  +  ++  S+  C  G+   LFK   QN +  D H   +E   A
Sbjct: 311 FNLAPCTQYSFRIISFTDDGILGHSESKCYTGSKELLFKRTTQNVAGADAHTHRREKTQA 370


>08_02_0921 -
           22640125-22640268,22640349-22640423,22640496-22640757,
           22642286-22642578,22642609-22642812,22643216-22643901,
           22643958-22644033
          Length = 579

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
 Frame = +2

Query: 206 DKHVKGKESASAACETQVCRESLEECLKN---FDKNVLAEMRSVDLRSLATIAASSXRXL 376
           D+ +  + +     + +V R     CL N   F + VL + R   LR L+   +S     
Sbjct: 335 DEFLNAQPTYDMFAKLRVVRMKKVACLCNEMHFMEFVLNKARV--LRVLSVYPSSGVTCS 392

Query: 377 NDFGGVTSCXKVSYTSSESF---EKNRNGWSDTPSVTVELRGKNT 502
           N+   +T   +VS  +   F   E   NG+ DTPSV  +L    T
Sbjct: 393 NEQAFITEHPRVSPDAQVIFMNRESANNGYMDTPSVNYKLETTRT 437


>08_01_0519 -
           4518256-4519623,4520840-4521230,4521313-4521525,
           4521632-4521723,4522226-4522342,4522641-4522704,
           4523175-4523228,4523579-4523666,4523788-4524023,
           4525258-4525478,4525634-4525827,4525938-4525995,
           4526771-4526824,4526851-4527473,4527580-4527640,
           4528417-4528590,4528803-4529063,4529201-4529320,
           4529388-4530022,4530062-4530828,4530915-4531012,
           4531101-4531155,4531230-4531318
          Length = 2010

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
 Frame = +2

Query: 221 GKESASAACETQVCRESLEECLKNFDKNVLAEMRSV-DLRSLATIAASSXRXLNDFGGVT 397
           G  +    C   + +E L+  ++++    L +  ++ +  SLA   A+  R LNDFG + 
Sbjct: 668 GINAEKEQCNEPLEQEKLQSPIQSYALKFLKDNCNISECLSLAEAPATPDR-LNDFGILK 726

Query: 398 SCXKVSYTSSESFEKNRNGWSDTPSVTVELRG 493
              ++S  ++ S +KN    S T SV    RG
Sbjct: 727 VPDQLSEKTNNSRQKNDYEPSTTGSVADAHRG 758


>03_02_0078 + 5476288-5476626,5477474-5477670,5477750-5477885,
            5478055-5478132,5478227-5478280,5478466-5478650,
            5478781-5480374,5480506-5480700,5480753-5480904,
            5481213-5481486,5481597-5481733,5482219-5482258,
            5482773-5483261,5483605-5484168
          Length = 1477

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +2

Query: 188  KQNSLKDKHVKGKESASAACETQVCRESLEECLKNFDKN 304
            K NSL+ ++ KG + + ++ ETQ  +E      +N  KN
Sbjct: 1036 KGNSLEPEYAKGSDDSQSSNETQRIKEIFMSKHRNVSKN 1074


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,383,065
Number of Sequences: 37544
Number of extensions: 280227
Number of successful extensions: 664
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)