Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_K06
         (548 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99171-2|CAB16314.1|  710|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AF045645-6|AAC02608.1|  314|Caenorhabditis elegans Collagen prot...    29   2.9  
Z73976-2|CAA98285.1|  360|Caenorhabditis elegans Hypothetical pr...    27   6.7  
U00055-6|AAA50724.1|  494|Caenorhabditis elegans Hypothetical pr...    27   8.9  
AF067214-3|AAC17002.1|  211|Caenorhabditis elegans Hypothetical ...    27   8.9  
AC024765-5|AAF60527.3|  975|Caenorhabditis elegans Hypothetical ...    27   8.9  

>Z99171-2|CAB16314.1|  710|Caenorhabditis elegans Hypothetical
           protein F47G4.2 protein.
          Length = 710

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 261 KILNMQFFFFCKPNKNIYTLGI 326
           K+LN  FF FCK   N+Y+L I
Sbjct: 148 KLLNPDFFQFCKSFPNLYSLDI 169


>AF045645-6|AAC02608.1|  314|Caenorhabditis elegans Collagen protein
           101 protein.
          Length = 314

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 2   GXPRRAGHQQVPRQGTRGICSERSQPGAPALAPRP 106
           G P +AGH Q  + G +G       PG P  A +P
Sbjct: 256 GQPGQAGHAQPGQPGPQGDAGAPGAPGQPGSAGQP 290


>Z73976-2|CAA98285.1|  360|Caenorhabditis elegans Hypothetical
           protein T07C12.6 protein.
          Length = 360

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 279 IAYLVFYSFSLIINS*CIKSYV 214
           I  L+FY F+  INS C+K Y+
Sbjct: 34  ITELIFYFFAFYINSVCLKVYL 55


>U00055-6|AAA50724.1|  494|Caenorhabditis elegans Hypothetical
           protein R02F2.8 protein.
          Length = 494

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 177 CSGTFRNLRAPGRT*VGRC 121
           C GTFRNL   G+  +G C
Sbjct: 471 CCGTFRNLTVSGQNPIGYC 489


>AF067214-3|AAC17002.1|  211|Caenorhabditis elegans Hypothetical
           protein F56C3.5 protein.
          Length = 211

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +1

Query: 130 HLGSTWRPKISKRSTTKHKNGLYRFFVENVTFY 228
           H      P+I KR + K+ NG++  F+  + FY
Sbjct: 170 HCSENMGPEI-KRMSIKYNNGIFYLFINLIDFY 201


>AC024765-5|AAF60527.3|  975|Caenorhabditis elegans Hypothetical
           protein Y39A3CR.3 protein.
          Length = 975

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 366 YQQRYKIAFRKNIRSLKCIYFCLAYKK 286
           +   Y +    NI   KC+Y CL ++K
Sbjct: 87  HSDNYTVKIEANILLAKCLYACLEFRK 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,915,641
Number of Sequences: 27780
Number of extensions: 199145
Number of successful extensions: 594
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)