Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_K05
         (844 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           26   0.43 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   4.0  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   4.0  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   4.0  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   4.0  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   4.0  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   4.0  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   4.0  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   4.0  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   5.3  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   5.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   5.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   7.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   7.0  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   9.2  

>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 25.8 bits (54), Expect = 0.43
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 508 VQADHVAPSPTQKPHPQITPEISFKYED 591
           +Q   +AP+  Q P+ Q  P  S KY D
Sbjct: 76  LQPQRLAPTHLQSPNTQTHPSASCKYAD 103


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 508 VQADHVAPSPTQKPHPQITPEISFKYED 591
           +Q   +A +  Q P+ Q  P  S KY D
Sbjct: 76  LQPQRLASTHLQSPNTQTHPSASCKYAD 103


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 508 VQADHVAPSPTQKPHPQITPEISFKYED 591
           +Q   +A +  Q P+ Q  P  S KY D
Sbjct: 76  LQPQRLASTHLQSPNTQTHPSASCKYAD 103


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 508 VQADHVAPSPTQKPHPQITPEISFKYED 591
           +Q   +A +  Q P+ Q  P  S KY D
Sbjct: 76  LQPQRLASTHLQSPNTQTHPSASCKYAD 103


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 508 VQADHVAPSPTQKPHPQITPEISFKYED 591
           +Q   +A +  Q P+ Q  P  S KY D
Sbjct: 76  LQPQRLASTHLQSPNTQTHPSASCKYAD 103


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 508 VQADHVAPSPTQKPHPQITPEISFKYED 591
           +Q   +A +  Q P+ Q  P  S KY D
Sbjct: 76  LQPQRLASTHLQSPNTQTHPSASCKYAD 103


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 508 VQADHVAPSPTQKPHPQITPEISFKYED 591
           +Q   +A +  Q P+ Q  P  S KY D
Sbjct: 32  LQPQRLASTHLQSPNTQTHPSASCKYAD 59


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 508 VQADHVAPSPTQKPHPQITPEISFKYED 591
           +Q   +A +  Q P+ Q  P  S KY D
Sbjct: 76  LQPQRLASTHLQSPNTQTHPSASCKYAD 103


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 508 VQADHVAPSPTQKPHPQITPEISFKYED 591
           +Q   +A +  Q P+ Q  P  S KY D
Sbjct: 76  LQPQRLASTHLQSPNTQTHPSASCKYAD 103


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 505 SVQADHVAPSPTQKPHPQIT 564
           ++++D + P P   P PQ T
Sbjct: 385 ALKSDEIPPEPVPTPEPQPT 404


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = -1

Query: 820 LGTLSILQIIVWRNEVPSRRDVYLSSRMA 734
           +GTL++ + ++++  +   RD+  S RMA
Sbjct: 164 IGTLTVKEHLIFQALLRMDRDISYSQRMA 192


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = -1

Query: 820 LGTLSILQIIVWRNEVPSRRDVYLSSRMA 734
           +GTL++ + ++++  +   RD+  S RMA
Sbjct: 164 IGTLTVKEHLIFQALLRMDRDISYSQRMA 192


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 755 YIPPRRHFITPYNYLKD 805
           Y P R+   TP  Y KD
Sbjct: 107 YYPSRQTLYTPVQYFKD 123



 Score = 21.8 bits (44), Expect = 7.0
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +1

Query: 706  LGGWQKPEIMPFENLNIHPAAKA--LHYAIQLFE 801
            LGGW   +   +  L  +PAA+A  + + +Q  E
Sbjct: 1475 LGGWNDSQGDKYSRLVNNPAARARFIKHVLQFLE 1508


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 676  HMLKIYYHKELGGWQKPEIMP 738
            H   I+Y  E G W+  +I P
Sbjct: 1427 HGYTIHYKPEFGDWETVQIGP 1447


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 508 VQADHVAPSPTQKPHPQITPE 570
           + A+ V+ SPT  P P   PE
Sbjct: 86  ILAEKVSVSPTTPPTPSPPPE 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,832
Number of Sequences: 336
Number of extensions: 4332
Number of successful extensions: 19
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)