Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_K05
         (844 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid aminotr...    77   3e-15
SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyc...    28   1.9  
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig...    27   3.3  
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra...    27   4.4  
SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Ma...    27   4.4  
SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inosito...    26   5.8  
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c...    26   7.7  

>SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid
           aminotransferase Eca39|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 380

 Score = 77.0 bits (181), Expect = 3e-15
 Identities = 34/67 (50%), Positives = 45/67 (67%)
 Frame = +1

Query: 619 QLTPKPEAKELGFGKYFTDHMLKIYYHKELGGWQKPEIMPFENLNIHPAAKALHYAIQLF 798
           +L P PE K L FG+ FTDHML + +++E G W  PEI+PF  L  HPA+   HY  + F
Sbjct: 25  ELKPLPEWKSLKFGENFTDHMLIMKWNREKG-WSTPEIVPFGKLCFHPASSVFHYGFECF 83

Query: 799 EGLKAYR 819
           EG+KA+R
Sbjct: 84  EGMKAFR 90


>SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 920

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 19/79 (24%), Positives = 31/79 (39%)
 Frame = +1

Query: 472 SSSLRYKELEDSVQADHVAPSPTQKPHPQITPEISFKYEDLQVRLAAPYQLTPKPEAKEL 651
           S  + YK LE            T +P   + PE +    D+    +   ++  K EAK +
Sbjct: 270 SLDMDYKPLEPLAPIQEAPVEDTSEPFSSV-PEATLDDSDISTE-SLRKKVLAKMEAKRI 327

Query: 652 GFGKYFTDHMLKIYYHKEL 708
             G  +   + K+Y   EL
Sbjct: 328 SSGSSYASTLRKVYDFSEL 346


>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
            E3 |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1647

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -1

Query: 844  TXVFYHQHLGTLSILQIIVWRNEVPSRRDVYLSSRMA*SPV 722
            T  FY       ++  + +WRN+ P+ + VY +S +  SP+
Sbjct: 1318 TLEFYTSVSKEFTLNSLDIWRNDQPNSKFVYQASGLFPSPI 1358


>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
            transporting Cta4 |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1211

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +1

Query: 520  HVAPSPTQKPHPQITPE-ISFKYEDLQVRLAAPYQLTPKPEAKE 648
            H  P     PH + T E ++   EDL+ + A+  QLT   +A E
Sbjct: 888  HAFPPGPNNPHREKTQEGLNKVLEDLETKKASDVQLTEAEKAAE 931


>SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 963

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +1

Query: 583 YEDLQVRLAAPYQLTPKPEAKELGFGKYFTDHMLKIYYHKELGGWQK-PEIMP 738
           Y+  Q  +++P    P P +  + FG Y          H EL  +Q+ P +MP
Sbjct: 312 YQAAQSNISSPSSRFPTPYSPSVPFGTYQEKEKSYSQDHAELSYYQQSPSMMP 364


>SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inositol
           pyrophosphate synthase |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 920

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +1

Query: 562 TPEISFKYEDLQVRLAAPYQLTPKPEAKELGFGKYFTDHMLKIYYHKELGG 714
           TPE+    ED    L+   ++  KP  ++  +G+   DH + IY+ K +GG
Sbjct: 172 TPEVKMLDEDT---LSVDGKIIKKPYVEKPVYGE---DHNIYIYFPKSVGG 216


>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 474

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
 Frame = +1

Query: 499 EDSVQADHVAPSPTQKPHPQ------ITPEISFKYEDLQVRLAAPYQLTPKP 636
           E+S+ A  + P  T KP+PQ      +   +S + + L++  +  +  TP+P
Sbjct: 52  EESMPAPKLFPKLTSKPNPQLNLKDTLNKRVSDRLQALELNKSFDFSGTPRP 103


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,400,138
Number of Sequences: 5004
Number of extensions: 69345
Number of successful extensions: 162
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 416455520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)