Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_K02
         (725 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    27   0.12 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   3.3  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = +1

Query: 184 NVYNDAEKAYYESLSKMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLR 342
           N +N+A K  Y    K+DS+ +    P+   + K+  L  E   +K+ ++DL+
Sbjct: 259 NDFNEAIKEAY--FPKLDSLVSSRAWPSRVANQKLRDLNREVDQIKQDVEDLK 309


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/48 (20%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = -3

Query: 633 HISLIIPWLYIQNNIRLCN*HWLFSFLCIICSKTLFLYLSCFST-LLF 493
           H+    P++    +  LC  ++ ++F+ ++C    +     F+  LLF
Sbjct: 82  HLLFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLF 129


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 425 FSD*IQSEVILLDDSKVSTRTCRLMTKLR 339
           F+D IQ E I LDD+++ +   R    L+
Sbjct: 112 FADLIQLEQIHLDDNRIESLERRAFMNLK 140


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,690
Number of Sequences: 336
Number of extensions: 2685
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)