Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_K01
(578 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB757A Cluster: PREDICTED: similar to MUS81 endo... 73 4e-12
UniRef50_UPI0000D57536 Cluster: PREDICTED: similar to MUS81 endo... 71 1e-11
UniRef50_Q7PWV5 Cluster: ENSANGP00000016665; n=2; Culicidae|Rep:... 60 4e-08
UniRef50_Q9V3T1 Cluster: CG3026-PA; n=2; Sophophora|Rep: CG3026-... 58 1e-07
UniRef50_Q5C5V9 Cluster: SJCHGC05317 protein; n=1; Schistosoma j... 57 3e-07
UniRef50_Q2KIT9 Cluster: MUS81 endonuclease homolog; n=1; Bos ta... 56 8e-07
UniRef50_UPI0000E48D47 Cluster: PREDICTED: similar to MUS81 endo... 54 2e-06
UniRef50_Q4SZ76 Cluster: Chromosome undetermined SCAF11805, whol... 54 2e-06
UniRef50_Q7SXA9 Cluster: Crossover junction endonuclease MUS81; ... 54 3e-06
UniRef50_Q96NY9 Cluster: Crossover junction endonuclease MUS81; ... 49 7e-05
UniRef50_UPI00015B60D5 Cluster: PREDICTED: similar to conserved ... 47 3e-04
UniRef50_Q6BJ48 Cluster: Crossover junction endonuclease MUS81; ... 38 0.13
UniRef50_Q8T856 Cluster: Similar to Homo sapiens (Human). MUS81 ... 36 0.91
UniRef50_A7SFR9 Cluster: Predicted protein; n=4; Nematostella ve... 36 0.91
UniRef50_Q4XFT7 Cluster: Putative uncharacterized protein; n=1; ... 34 2.1
UniRef50_UPI0000DD857D Cluster: PREDICTED: hypothetical protein;... 34 2.8
UniRef50_UPI0000E25793 Cluster: PREDICTED: hypothetical protein;... 33 4.9
UniRef50_Q23UA6 Cluster: Putative uncharacterized protein; n=1; ... 33 6.4
UniRef50_A0CN01 Cluster: Chromosome undetermined scaffold_22, wh... 32 8.5
>UniRef50_UPI0000DB757A Cluster: PREDICTED: similar to MUS81
endonuclease; n=1; Apis mellifera|Rep: PREDICTED:
similar to MUS81 endonuclease - Apis mellifera
Length = 451
Score = 73.3 bits (172), Expect = 4e-12
Identities = 41/98 (41%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Frame = +3
Query: 207 RITYKRKRPNPMFQXXXXXXXXXXXXXGSKLEPMLREALDSLSKYPLPLNSGAECAILRG 386
RI K K PNP+F+ S L+ +AL +L KYPLPL SG +C IL+
Sbjct: 3 RIKLKLKNPNPLFECWLEEWRKEAASRNSDLQYHFSKALAALKKYPLPLKSGKDCIILQH 62
Query: 387 FQKKLCIFLDKRLEVY---NSNLNDCKDEEC-IATHGE 488
F KKLC LD++LE Y NS+L + D C +H E
Sbjct: 63 FGKKLCSMLDRKLEEYKAQNSDLINANDYTCEYCSHNE 100
>UniRef50_UPI0000D57536 Cluster: PREDICTED: similar to MUS81
endonuclease homolog; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to MUS81 endonuclease homolog -
Tribolium castaneum
Length = 520
Score = 71.3 bits (167), Expect = 1e-11
Identities = 34/81 (41%), Positives = 46/81 (56%)
Frame = +3
Query: 207 RITYKRKRPNPMFQXXXXXXXXXXXXXGSKLEPMLREALDSLSKYPLPLNSGAECAILRG 386
RIT K K PNP+F+ SK++ AL SL YPLPL +G +C IL+G
Sbjct: 5 RITVKAKHPNPLFERWLIEWRDKAKENDSKMQHCFSMALKSLKNYPLPLETGKDCKILKG 64
Query: 387 FQKKLCIFLDKRLEVYNSNLN 449
F +KLC LD +L+ + +N N
Sbjct: 65 FGEKLCKMLDDKLKQFKANEN 85
>UniRef50_Q7PWV5 Cluster: ENSANGP00000016665; n=2; Culicidae|Rep:
ENSANGP00000016665 - Anopheles gambiae str. PEST
Length = 436
Score = 60.1 bits (139), Expect = 4e-08
Identities = 29/76 (38%), Positives = 43/76 (56%)
Frame = +3
Query: 207 RITYKRKRPNPMFQXXXXXXXXXXXXXGSKLEPMLREALDSLSKYPLPLNSGAECAILRG 386
RI+ + KRPNP+F+ + + L++AL SL +YPLPL +G +C L
Sbjct: 3 RISVRLKRPNPLFEMWLEEMIAKAEEKNTMGKMALQKALTSLRRYPLPLATGRDCIALMD 62
Query: 387 FQKKLCIFLDKRLEVY 434
F K +C LD+RL+ Y
Sbjct: 63 FGKTICENLDRRLKAY 78
>UniRef50_Q9V3T1 Cluster: CG3026-PA; n=2; Sophophora|Rep: CG3026-PA
- Drosophila melanogaster (Fruit fly)
Length = 426
Score = 58.0 bits (134), Expect = 1e-07
Identities = 29/73 (39%), Positives = 39/73 (53%)
Frame = +3
Query: 207 RITYKRKRPNPMFQXXXXXXXXXXXXXGSKLEPMLREALDSLSKYPLPLNSGAECAILRG 386
R+ + PNP+F K + LR+AL+SL YPLPL SG +C+ILRG
Sbjct: 4 RLEVLLREPNPLFTRWLERWLREAERREQKSQFSLRQALESLKSYPLPLASGRDCSILRG 63
Query: 387 FQKKLCIFLDKRL 425
F LC +D+ L
Sbjct: 64 FGGTLCQLIDEEL 76
>UniRef50_Q5C5V9 Cluster: SJCHGC05317 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05317 protein - Schistosoma
japonicum (Blood fluke)
Length = 242
Score = 57.2 bits (132), Expect = 3e-07
Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +3
Query: 180 ISIM-NTVGNRITYKRKRPNPMFQXXXXXXXXXXXXXGSKLEPMLREALDSLSKYPLPLN 356
+SIM +G + PN +FQ +K R+AL SL KYPL L
Sbjct: 32 LSIMIGPLGRKKKKSDSGPNLLFQSWITEAMENAFAKDAKSYYAYRKALSSLKKYPLLLQ 91
Query: 357 SGAECAILRGFQKKLCIFLDKRLEVYNSNL 446
SG +C IL GF KLC LD++L Y +L
Sbjct: 92 SGKDCKILEGFGVKLCDLLDEKLNNYAKDL 121
>UniRef50_Q2KIT9 Cluster: MUS81 endonuclease homolog; n=1; Bos
taurus|Rep: MUS81 endonuclease homolog - Bos taurus
(Bovine)
Length = 226
Score = 55.6 bits (128), Expect = 8e-07
Identities = 27/74 (36%), Positives = 41/74 (55%)
Frame = +3
Query: 231 PNPMFQXXXXXXXXXXXXXGSKLEPMLREALDSLSKYPLPLNSGAECAILRGFQKKLCIF 410
PNP+F G + + + ++AL SL +YPLPL SG E IL+ F LC
Sbjct: 17 PNPLFVRWLTEWRDEAASRGRRTQFVFQKALRSLRRYPLPLRSGKEAKILQHFGDGLCRM 76
Query: 411 LDKRLEVYNSNLND 452
LD+RL+ + +++ D
Sbjct: 77 LDQRLQQHKASVGD 90
>UniRef50_UPI0000E48D47 Cluster: PREDICTED: similar to MUS81
endonuclease homolog (yeast); n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to MUS81 endonuclease
homolog (yeast) - Strongylocentrotus purpuratus
Length = 794
Score = 54.4 bits (125), Expect = 2e-06
Identities = 28/75 (37%), Positives = 37/75 (49%)
Frame = +3
Query: 231 PNPMFQXXXXXXXXXXXXXGSKLEPMLREALDSLSKYPLPLNSGAECAILRGFQKKLCIF 410
PNP+F G K + +AL +L KYPLP SG IL F K+C
Sbjct: 17 PNPLFVQWLTEWRDAAAEKGIKTQYAYGKALVALKKYPLPFQSGKAAKILDNFGDKICSM 76
Query: 411 LDKRLEVYNSNLNDC 455
LDK+LE + +N +C
Sbjct: 77 LDKKLEEHLANEAEC 91
>UniRef50_Q4SZ76 Cluster: Chromosome undetermined SCAF11805, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF11805, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 586
Score = 54.4 bits (125), Expect = 2e-06
Identities = 26/69 (37%), Positives = 37/69 (53%)
Frame = +3
Query: 231 PNPMFQXXXXXXXXXXXXXGSKLEPMLREALDSLSKYPLPLNSGAECAILRGFQKKLCIF 410
PNPMF G K + ++A+ SL+KYPLPL S E IL+ F +C
Sbjct: 14 PNPMFLKWLTELRDEAREKGQKTQHTYQKAIQSLNKYPLPLKSAKEAKILQNFGDGICKI 73
Query: 411 LDKRLEVYN 437
LD++L+ Y+
Sbjct: 74 LDEKLQRYH 82
>UniRef50_Q7SXA9 Cluster: Crossover junction endonuclease MUS81;
n=6; Euteleostomi|Rep: Crossover junction endonuclease
MUS81 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 604
Score = 53.6 bits (123), Expect = 3e-06
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +3
Query: 231 PNPMFQXXXXXXXXXXXXXGSKLEPMLREALDSLSKYPLPLNSGAECAILRGFQKKLCIF 410
PNP+F G K + ++A++SL KYPLPL +G E IL+ F +C
Sbjct: 18 PNPLFLQWLTELRDSAKEKGLKTHFVYQKAINSLKKYPLPLKNGKEAKILQNFGDGICKI 77
Query: 411 LDKRLEV-YNSNLND 452
LD+RL+ Y N +D
Sbjct: 78 LDERLQKHYRENGSD 92
>UniRef50_Q96NY9 Cluster: Crossover junction endonuclease MUS81;
n=19; Mammalia|Rep: Crossover junction endonuclease
MUS81 - Homo sapiens (Human)
Length = 551
Score = 49.2 bits (112), Expect = 7e-05
Identities = 26/74 (35%), Positives = 38/74 (51%)
Frame = +3
Query: 231 PNPMFQXXXXXXXXXXXXXGSKLEPMLREALDSLSKYPLPLNSGAECAILRGFQKKLCIF 410
PNP+F + + ++AL SL +YPLPL SG E IL+ F LC
Sbjct: 17 PNPLFVRWLTEWRDEATRSRRRTRFVFQKALRSLRRYPLPLRSGKEAKILQHFGDGLCRM 76
Query: 411 LDKRLEVYNSNLND 452
LD+RL+ + ++ D
Sbjct: 77 LDERLQRHRTSGGD 90
>UniRef50_UPI00015B60D5 Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 698
Score = 47.2 bits (107), Expect = 3e-04
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +3
Query: 237 PMFQXXXXXXXXXXXXXGSKLEPMLREALDSLSKYPLPLNSGAECAILRGFQKKLCIFLD 416
P+F+ G+ + +AL SL + PL SG C ++R F KLC LD
Sbjct: 11 PLFEKWLEEWKDYAIQTGNPIHYSYGKALASLRQCPLRFESGKTCLLVRNFGPKLCDMLD 70
Query: 417 KRLEVY--NSNLNDCKDEECIATHGE 488
K+L Y +NL +E + H E
Sbjct: 71 KKLAAYRAENNLPPISEEPIVLAHVE 96
>UniRef50_Q6BJ48 Cluster: Crossover junction endonuclease MUS81;
n=1; Debaryomyces hansenii|Rep: Crossover junction
endonuclease MUS81 - Debaryomyces hansenii (Yeast)
(Torulaspora hansenii)
Length = 651
Score = 38.3 bits (85), Expect = 0.13
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 288 GSKLEPMLREALDSLSKYPLPLNSGAECAILRGFQKKLCIFLDKRLEVY 434
G+K + +AL S+ YPLP+N +++ K CI L K+LE Y
Sbjct: 27 GTKAAILYNKALGSVRNYPLPINDPKTLKLVQFVGDKTCIHLSKKLEEY 75
>UniRef50_Q8T856 Cluster: Similar to Homo sapiens (Human). MUS81
endonuclease; n=3; Dictyostelium discoideum|Rep: Similar
to Homo sapiens (Human). MUS81 endonuclease -
Dictyostelium discoideum (Slime mold)
Length = 964
Score = 35.5 bits (78), Expect = 0.91
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 288 GSKLEPMLREALDSLSKYPLPLNSGAECAILRGFQKKL 401
G+ + + A+ SL+ YPLP+ SG EC +L GF L
Sbjct: 86 GTPIGRLSDSAIRSLNLYPLPVFSGKECEVLNGFGPSL 123
>UniRef50_A7SFR9 Cluster: Predicted protein; n=4; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 185
Score = 35.5 bits (78), Expect = 0.91
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -3
Query: 564 YFYLXSHHRSSVDSDLFH*NYLHLMFHHVLRYILHLYSHSNY 439
Y +L HH ++ H +Y+ L++HH YI LY H++Y
Sbjct: 8 YIFLLYHHNHNIFLLYHHNHYIFLLYHH-NHYIFLLYHHNHY 48
Score = 35.1 bits (77), Expect = 1.2
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -3
Query: 564 YFYLXSHHRSSVDSDLFH*NYLHLMFHHVLRYILHLYSHSNY 439
Y +L HH + H +Y+ L++HH YI+ LY H++Y
Sbjct: 108 YIFLLYHHNHYIFLLYHHNHYIFLLYHHN-HYIILLYHHNHY 148
Score = 34.3 bits (75), Expect = 2.1
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 564 YFYLXSHHRSSVDSDLFH*NYLHLMFHHVLRYILHLYSHSNY 439
Y +L HH + H +Y+ L++HH YI LY H++Y
Sbjct: 28 YIFLLYHHNHYIFLLYHHNHYIFLLYHHN-HYIFLLYHHNHY 68
Score = 34.3 bits (75), Expect = 2.1
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 564 YFYLXSHHRSSVDSDLFH*NYLHLMFHHVLRYILHLYSHSNY 439
Y +L HH + H +Y+ L++HH YI LY H++Y
Sbjct: 38 YIFLLYHHNHYIFLLYHHNHYIFLLYHHN-HYIFLLYHHNHY 78
Score = 34.3 bits (75), Expect = 2.1
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 564 YFYLXSHHRSSVDSDLFH*NYLHLMFHHVLRYILHLYSHSNY 439
Y +L HH + H +Y+ L++HH YI LY H++Y
Sbjct: 48 YIFLLYHHNHYIFLLYHHNHYIFLLYHHN-HYIFLLYHHNHY 88
Score = 34.3 bits (75), Expect = 2.1
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 564 YFYLXSHHRSSVDSDLFH*NYLHLMFHHVLRYILHLYSHSNY 439
Y +L HH + H +Y+ L++HH YI LY H++Y
Sbjct: 58 YIFLLYHHNHYIFLLYHHNHYIFLLYHHN-HYIFLLYHHNHY 98
Score = 34.3 bits (75), Expect = 2.1
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 564 YFYLXSHHRSSVDSDLFH*NYLHLMFHHVLRYILHLYSHSNY 439
Y +L HH + H +Y+ L++HH YI LY H++Y
Sbjct: 68 YIFLLYHHNHYIFLLYHHNHYIFLLYHHN-HYIFLLYHHNHY 108
Score = 34.3 bits (75), Expect = 2.1
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 564 YFYLXSHHRSSVDSDLFH*NYLHLMFHHVLRYILHLYSHSNY 439
Y +L HH + H +Y+ L++HH YI LY H++Y
Sbjct: 78 YIFLLYHHNHYIFLLYHHNHYIFLLYHHN-HYIFLLYHHNHY 118
Score = 34.3 bits (75), Expect = 2.1
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 564 YFYLXSHHRSSVDSDLFH*NYLHLMFHHVLRYILHLYSHSNY 439
Y +L HH + H +Y+ L++HH YI LY H++Y
Sbjct: 88 YIFLLYHHNHYIFLLYHHNHYIFLLYHHN-HYIFLLYHHNHY 128
Score = 34.3 bits (75), Expect = 2.1
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 564 YFYLXSHHRSSVDSDLFH*NYLHLMFHHVLRYILHLYSHSNY 439
Y +L HH + H +Y+ L++HH YI LY H++Y
Sbjct: 98 YIFLLYHHNHYIFLLYHHNHYIFLLYHHN-HYIFLLYHHNHY 138
Score = 34.3 bits (75), Expect = 2.1
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 564 YFYLXSHHRSSVDSDLFH*NYLHLMFHHVLRYILHLYSHSNY 439
Y +L HH + H +Y+ L++HH YI LY H++Y
Sbjct: 128 YIFLLYHHNHYIILLYHHNHYIFLLYHHN-HYIFLLYHHNHY 168
Score = 33.5 bits (73), Expect = 3.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 564 YFYLXSHHRSSVDSDLFH*NYLHLMFHHVLRYILHLYSHSNY 439
Y +L HH + H +Y+ L++HH YI LY H++Y
Sbjct: 118 YIFLLYHHNHYIFLLYHHNHYIILLYHHN-HYIFLLYHHNHY 158
Score = 32.7 bits (71), Expect = 6.4
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -3
Query: 564 YFYLXSHHRSSVDSDLFH*NYLHLMFHHVLRYILHLYSHSNY 439
Y L HH + H +Y+ L++HH YI LY H++Y
Sbjct: 138 YIILLYHHNHYIFLLYHHNHYIFLLYHHN-HYIFLLYHHNHY 178
>UniRef50_Q4XFT7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 196
Score = 34.3 bits (75), Expect = 2.1
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -3
Query: 564 YFYLXSHHRSSVDSDLFH*NYLHLMFHHVLRYILHLYSHSNYYCKLL 424
Y++L HH H Y HL+FHH Y HL H +Y L+
Sbjct: 72 YYHLIFHHPFYYHLIFHHPFYYHLIFHHPFDY--HLIFHHPFYYNLI 116
Score = 33.9 bits (74), Expect = 2.8
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -3
Query: 564 YFYLXSHHRSSVDSDLFH*NYLHLMFHHVLRYILHLYSHSNYYCKLL 424
Y++L HH H Y HL+FHH Y HL H +Y L+
Sbjct: 42 YYHLIFHHPFYYHLIFHHPFYYHLIFHHPFYY--HLIFHHPFYYHLI 86
Score = 33.9 bits (74), Expect = 2.8
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -3
Query: 564 YFYLXSHHRSSVDSDLFH*NYLHLMFHHVLRYILHLYSHSNYYCKLL 424
Y++L HH H Y HL+FHH Y HL H +Y L+
Sbjct: 52 YYHLIFHHPFYYHLIFHHPFYYHLIFHHPFYY--HLIFHHPFYYHLI 96
>UniRef50_UPI0000DD857D Cluster: PREDICTED: hypothetical protein;
n=2; Catarrhini|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 275
Score = 33.9 bits (74), Expect = 2.8
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -3
Query: 504 YLHLMFHHVLRYILHLYSHSNYYCKLLT-VYLRICI 400
YLHL H +R LHLY H + +LL ++L +CI
Sbjct: 68 YLHLHLHLCVRLYLHLYQHLYPHLRLLLYLHLHLCI 103
>UniRef50_UPI0000E25793 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 476
Score = 33.1 bits (72), Expect = 4.9
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -3
Query: 567 IYFYLXSHHRSSVDSDLFH*NYLHLMFHHVLRYILHLYSHSNYYCK-LLTVYLRICI 400
++ +L H + +L YLHL H +R LHLY H + LL ++L +CI
Sbjct: 325 LHLHLSLHLHLHLHLNLHLYLYLHLHLHLCVRLYLHLYRHLYPHLHLLLCLHLHLCI 381
>UniRef50_Q23UA6 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 769
Score = 32.7 bits (71), Expect = 6.4
Identities = 13/36 (36%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +3
Query: 408 FLDKRLEVYNSNLNDC-KDEECIATHGETLSEDSSS 512
FL+K+ + + S LN+C K+EE + + E +++D+ S
Sbjct: 166 FLNKKAQEFKSQLNECKKEEEIVKKNSEEINKDTQS 201
>UniRef50_A0CN01 Cluster: Chromosome undetermined scaffold_22, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_22,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1368
Score = 32.3 bits (70), Expect = 8.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -3
Query: 570 DIYFYLXSHHRSSVDSDLFH*NYLHLMFHHVLRYILHLYSHSNY 439
D+Y L S + S DSD + HL HH I H + HS++
Sbjct: 706 DVYSQLYSDYDSDYDSDYDYHVRRHLSHHHRAPQIQHFHHHSHH 749
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 459,568,927
Number of Sequences: 1657284
Number of extensions: 8535629
Number of successful extensions: 19748
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 18940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19678
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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