Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_K01
         (578 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    27   0.44 
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          26   1.0  
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    24   4.1  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   7.2  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 27.1 bits (57), Expect = 0.44
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 247 WNIGFGRFLLYVILLPTVFMIEMFGNSSYLRYNRISSRFFFYR 119
           W   FGR      + P   +    G S YLR+  +S+R F+Y+
Sbjct: 231 WVASFGR----PKMTPQSLLASQTGLSPYLRFGCLSTRLFYYQ 269


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +1

Query: 217 TKGNGQIRCSRSGSKSYTRKPRKKAVN*SR 306
           T G+G+ R SRS SKS ++  R ++ + SR
Sbjct: 397 TVGDGKKRSSRSRSKSLSKSSRSRSRSLSR 426


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 211 ILLPTVFMIEMFGNSSYL 158
           I+LPT+FM+  FG    L
Sbjct: 190 IMLPTIFMLAYFGGLKLL 207


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -3

Query: 549 SHHRSSVDSDLFH*NYLHLMFHHVLRYILHLYSHSNYYCKLLTVYL 412
           +HH     S++F    +H   H  + YIL   SH+  Y +L  + L
Sbjct: 677 NHHDDEPMSEIF----IHQAIH-TIEYILSTISHTASYLRLWALSL 717


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 500,196
Number of Sequences: 2352
Number of extensions: 9275
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)