Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_K01
         (578 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC009999-1|AAH09999.2|  551|Homo sapiens MUS81 endonuclease homo...    49   1e-05
AK223564-1|BAD97284.1|  550|Homo sapiens MUS81 endonuclease homo...    49   1e-05
AF425646-1|AAL28065.1|  551|Homo sapiens MUS81 endonuclease prot...    49   1e-05
X83467-1|CAA58470.1|  660|Homo sapiens 70kD peroxisomal integral...    31   2.2  

>BC009999-1|AAH09999.2|  551|Homo sapiens MUS81 endonuclease homolog
           (S. cerevisiae) protein.
          Length = 551

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 26/74 (35%), Positives = 38/74 (51%)
 Frame = +3

Query: 231 PNPMFQXXXXXXXXXXXXXGSKLEPMLREALDSLSKYPLPLNSGAECAILRGFQKKLCIF 410
           PNP+F                +   + ++AL SL +YPLPL SG E  IL+ F   LC  
Sbjct: 17  PNPLFVRWLTEWRDEATRSRHRTRFVFQKALRSLRRYPLPLRSGKEAKILQHFGDGLCRM 76

Query: 411 LDKRLEVYNSNLND 452
           LD+RL+ + ++  D
Sbjct: 77  LDERLQRHRTSGGD 90


>AK223564-1|BAD97284.1|  550|Homo sapiens MUS81 endonuclease homolog
           protein.
          Length = 550

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 26/74 (35%), Positives = 38/74 (51%)
 Frame = +3

Query: 231 PNPMFQXXXXXXXXXXXXXGSKLEPMLREALDSLSKYPLPLNSGAECAILRGFQKKLCIF 410
           PNP+F                +   + ++AL SL +YPLPL SG E  IL+ F   LC  
Sbjct: 17  PNPLFVRWLTEWRDEATRSRRRTRFVFQKALRSLRRYPLPLRSGKEAKILQHFGDGLCRM 76

Query: 411 LDKRLEVYNSNLND 452
           LD+RL+ + ++  D
Sbjct: 77  LDERLQRHRTSGGD 90


>AF425646-1|AAL28065.1|  551|Homo sapiens MUS81 endonuclease
           protein.
          Length = 551

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 26/74 (35%), Positives = 38/74 (51%)
 Frame = +3

Query: 231 PNPMFQXXXXXXXXXXXXXGSKLEPMLREALDSLSKYPLPLNSGAECAILRGFQKKLCIF 410
           PNP+F                +   + ++AL SL +YPLPL SG E  IL+ F   LC  
Sbjct: 17  PNPLFVRWLTEWRDEATRSRHRTRFVFQKALRSLRRYPLPLRSGKEAKILQHFGDGLCRM 76

Query: 411 LDKRLEVYNSNLND 452
           LD+RL+ + ++  D
Sbjct: 77  LDERLQRHRTSGGD 90


>X83467-1|CAA58470.1|  660|Homo sapiens 70kD peroxisomal integral
           membrane protein protein.
          Length = 660

 Score = 31.5 bits (68), Expect = 2.2
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -3

Query: 573 VDIYFYLXSHHRSSVDSDLFH*NYLHLMFHHVLRYILHLYSHSNYYCKLLT 421
           VD+  Y+ SH R      L H   +  +F +++RY LH+    NY  K +T
Sbjct: 603 VDVEGYIYSHCRKGWHHSL-HLCLIGNLFGNIMRYYLHMDGRGNYEFKQIT 652


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,913,916
Number of Sequences: 237096
Number of extensions: 1239594
Number of successful extensions: 1975
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1975
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)