Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_J23
(694 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 132 3e-31
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 112 2e-25
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 58 6e-18
AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione ... 39 0.004
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 31 0.59
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 31 0.59
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 31 0.59
U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical pr... 31 0.78
L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 31 0.78
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z67756-1|CAA91762.1| 157|Caenorhabditis elegans Hypothetical pr... 29 4.2
U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormon... 29 4.2
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 28 5.5
AC024832-3|AAF59615.1| 121|Caenorhabditis elegans Hypothetical ... 28 5.5
AF016448-13|AAB65963.1| 239|Caenorhabditis elegans Hypothetical... 28 7.3
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 132 bits (318), Expect = 3e-31
Identities = 82/219 (37%), Positives = 122/219 (55%)
Frame = +2
Query: 38 GVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADG 217
G LY +NFR K LIAA+ + V +A G+ ++ KFP G PAFE G
Sbjct: 3 GKLYGNKDNFRTQKVLIAAKLANKTVTLA-----GDAAPAD----KFPLGVTPAFE---G 50
Query: 218 KVLLTESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNK 397
LL + +I ++ S A QW +++ LLPA +V P + F+K
Sbjct: 51 DALLFGAESIGLHLTGTS-------ANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDK 103
Query: 398 QNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQHVLXPSVRSSLI 577
+ VE+ K++L L+VLD L+ +T+LV ER++LADV V LL AFQ+VL + R S++
Sbjct: 104 KTVEQYKNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLDANARKSIV 163
Query: 578 NVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYXEL 694
NV RWF TV +QP V V+G ++L ++ ++ K+ EL
Sbjct: 164 NVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQAKFTEL 202
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 112 bits (270), Expect = 2e-25
Identities = 58/154 (37%), Positives = 92/154 (59%)
Frame = +2
Query: 233 ESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVER 412
E +A+ + + L + A QW +++ LLPA +V P + F+K+ VE+
Sbjct: 24 EGDALLFGAESIGLHLTGTSANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQ 83
Query: 413 AKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQHVLXPSVRSSLINVQRW 592
K++L L+VLD L+ +T+LV ER++LADV V LL AFQ+VL + R S++NV RW
Sbjct: 84 YKNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLDANARKSIVNVTRW 143
Query: 593 FLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYXEL 694
F TV +QP V V+G ++L ++ ++ K+ EL
Sbjct: 144 FRTVVNQPAVKEVLGEVSLASSVAQFNQAKFTEL 177
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 58.4 bits (135), Expect(2) = 6e-18
Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
Frame = +2
Query: 38 GVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADG 217
G LY +NFR K LIAA+ + V +A G+ ++ KFP G PAFE G
Sbjct: 3 GKLYGNKDNFRTQKVLIAAKLANKTVTLA-----GDAAPAD----KFPLGVTPAFE---G 50
Query: 218 KVLLTESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNK 397
LL + +I ++ S A QW +++ LLPA +V P + F+K
Sbjct: 51 DALLFGAESIGLHLTGTS-------ANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDK 103
Query: 398 QNVERAKSDLLAALK-VLDGH 457
+ VE+ K++L L+ VLD +
Sbjct: 104 KTVEQYKNELNGQLQYVLDAN 124
Score = 50.0 bits (114), Expect(2) = 6e-18
Identities = 21/52 (40%), Positives = 34/52 (65%)
Frame = +2
Query: 539 QHVLXPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYXEL 694
Q+VL + R S++NV RWF TV +QP V V+G ++L ++ ++ K+ EL
Sbjct: 118 QYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQAKFTEL 169
>AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione
s-transferase protein43 protein.
Length = 214
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +2
Query: 29 MAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSE-DFLKKFPAGKVPAFE 205
MA +LY+Y + A++ IA D + P +F E +K+ +F+K PA KVP
Sbjct: 1 MAKPILYSYWRSSCAWRVRIALALKNIDYEYRPIDLFSEESKNNAEFVKHNPAKKVPTL- 59
Query: 206 SADGKVLLTESNAIAYYV 259
+ LTES AI Y+
Sbjct: 60 -VINGLSLTESLAIIEYL 76
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 31.5 bits (68), Expect = 0.59
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 122 APNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQA 301
+P+F+ +++ LK P +P + KVL T + + +Y+ E + LA Q
Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084
Query: 302 RVWQ 313
++WQ
Sbjct: 1085 QIWQ 1088
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 31.5 bits (68), Expect = 0.59
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 122 APNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQA 301
+P+F+ +++ LK P +P + KVL T + + +Y+ E + LA Q
Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084
Query: 302 RVWQ 313
++WQ
Sbjct: 1085 QIWQ 1088
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 31.5 bits (68), Expect = 0.59
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 122 APNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQA 301
+P+F+ +++ LK P +P + KVL T + + +Y+ E + LA Q
Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084
Query: 302 RVWQ 313
++WQ
Sbjct: 1085 QIWQ 1088
>U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical
protein ZK430.1 protein.
Length = 1650
Score = 31.1 bits (67), Expect = 0.78
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -3
Query: 272 DFHWQRSKRWHCFQLEAPFHRHFRMQALFRQETSSR-SLRTCWSRQIRNSV 123
DF W+RSK W Q ++ R SS+ S+ TC + IR++V
Sbjct: 153 DFDWKRSKEWQFMQQFTKTETPIPFTSIARATLSSKHSIITCITDHIRHAV 203
>L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical
protein C02D5.3c protein.
Length = 254
Score = 31.1 bits (67), Expect = 0.78
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +2
Query: 2 GRPMPKTPTMAAGVLYTYPENFR--AYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKK 175
G P P P A+G + Y + A +ALI A +V N + K + F K
Sbjct: 15 GDPAPAPP--ASGTIRIYNMRYCPWAQRALIFASLKKIPTEVI-NIHLDQ--KPDWFFTK 69
Query: 176 FPAGKVPAFESADGKVLLTESNAIAYYV 259
G+VPA E +GK ++ ES I Y+
Sbjct: 70 HYKGQVPALEHDEGKKIVIESAVIPEYL 97
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical
protein C02D5.3a protein.
Length = 537
Score = 31.1 bits (67), Expect = 0.78
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +2
Query: 2 GRPMPKTPTMAAGVLYTYPENFR--AYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKK 175
G P P P A+G + Y + A +ALI A +V N + K + F K
Sbjct: 298 GDPAPAPP--ASGTIRIYNMRYCPWAQRALIFASLKKIPTEVI-NIHLDQ--KPDWFFTK 352
Query: 176 FPAGKVPAFESADGKVLLTESNAIAYYV 259
G+VPA E +GK ++ ES I Y+
Sbjct: 353 HYKGQVPALEHDEGKKIVIESAVIPEYL 380
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical
protein F25C8.3b protein.
Length = 3175
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 542 HVLXPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTL 649
H L PS+ ++L +V RW L A P V GSL L
Sbjct: 85 HGLSPSLSNALASVSRWKLVRAALPHVIQCCGSLLL 120
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical
protein F25C8.3a protein.
Length = 3184
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 542 HVLXPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTL 649
H L PS+ ++L +V RW L A P V GSL L
Sbjct: 85 HGLSPSLSNALASVSRWKLVRAALPHVIQCCGSLLL 120
>Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical
protein F13A7.10 protein.
Length = 254
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +2
Query: 56 PENFRAYKALI--AAQYS--GTDVKVAPNFVFGET--NKSEDFLKKFPAGKVPAFESADG 217
P FR Y AAQ + VK P+ V K + + K G+VP E A+G
Sbjct: 24 PNTFRIYSMRFCPAAQRALIYASVKKIPSEVININLQQKPDWYFTKNYKGQVPTLEHAEG 83
Query: 218 KVLLTESNAIAYYV 259
K L+ ES I Y+
Sbjct: 84 KKLVIESAVIPEYL 97
>Z67756-1|CAA91762.1| 157|Caenorhabditis elegans Hypothetical
protein R07A4.2 protein.
Length = 157
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = -1
Query: 178 KLLQEVFGLVGLAKYEIRCYFHISPGILCGDQRFISAEVFRISV 47
K+LQ +FG + L+ CY + + CG++ F S++VF++ V
Sbjct: 22 KILQLIFGFINLSA-NYWCYPN-QHFLYCGERYFTSSQVFQLIV 63
>U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 78 protein.
Length = 387
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 320 SWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAAL 439
S+ ++ +L A C W + + + +K+NV + KS L+ L
Sbjct: 298 SFEENAILKALCCWQTAHFKLEECDKENVRKQKSLLVQCL 337
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = -1
Query: 316 PLPDTGLGSQISSAETFIGNVVSDGI--AFS*KHLSIGT-FECRHFSGRKLLQEVFGLVG 146
P+ + + +S TF+G VVSDGI S S+ T FE R R++L+ V+
Sbjct: 514 PMNGSTIREDFASESTFLGRVVSDGIMPRISASSNSVLTEFETRF---RRILKRVYR--S 568
Query: 145 LAKYEIR 125
L ++EIR
Sbjct: 569 LQQHEIR 575
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 164 FLKKFPAGKVPAFESADGKVLLTESNAIAYYV 259
+L K P G+VPA E +GKV + ESN I Y+
Sbjct: 138 YLPKSPIGRVPALE-INGKV-VWESNVIVEYL 167
>AC024832-3|AAF59615.1| 121|Caenorhabditis elegans Hypothetical
protein Y57E12AL.2 protein.
Length = 121
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 362 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTER 490
VF L ++ F +N E+ KS++LAA G TF+ T +
Sbjct: 35 VFALLAVVAFANRNPEQMKSEMLAAGVSAAGVATISTFMETHK 77
>AF016448-13|AAB65963.1| 239|Caenorhabditis elegans Hypothetical
protein F41E6.1 protein.
Length = 239
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 179 ETSSRSLRTCWSRQIRNSVLLSHQSRNIVR 90
ET +R CWSR N+V R++VR
Sbjct: 167 ETGGAIVRDCWSRVFSNAVKNPRARRDVVR 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,069,116
Number of Sequences: 27780
Number of extensions: 377680
Number of successful extensions: 1086
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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