Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_J19
         (571 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC023506-1|AAH23506.1|  222|Homo sapiens chromosome X open readi...   221   2e-57
AK026618-1|BAB15510.1|  222|Homo sapiens NA.  protein.                221   2e-57
AC004000-2|AAB96348.1|   81|Homo sapiens WUGSC:H_DJ404F18.2 prot...    83   7e-16
BC047590-1|AAH47590.1|  979|Homo sapiens HEAT repeat containing ...    31   2.2  

>BC023506-1|AAH23506.1|  222|Homo sapiens chromosome X open reading
           frame 56 protein.
          Length = 222

 Score =  221 bits (539), Expect = 2e-57
 Identities = 110/187 (58%), Positives = 139/187 (74%), Gaps = 3/187 (1%)
 Frame = +2

Query: 17  KPLHIYYCLCGQMSLILDCTIDKLPLRPFDSARVIDGSKHAHKITSDPDE-TVYLRREKG 193
           KPLH+YYCLCGQM L+LDC ++KLP+RP D +RVID +KHAHK  +  DE T+YLRR +G
Sbjct: 25  KPLHVYYCLCGQMVLVLDCQLEKLPMRPRDRSRVIDAAKHAHKFCNTEDEETMYLRRPEG 84

Query: 194 IERQYRLKCKKCALPIYYKHD-QESNVAFIIDGALVQTPGEG-GVTDIYKQVALTQPKKI 367
           IERQYR KC KC LP++Y+   + + V FI+DGA+V+  G+G G T+IY Q     PKK+
Sbjct: 85  IERQYRKKCAKCGLPLFYQSQPKNAPVTFIVDGAVVKF-GQGFGKTNIYTQKQ-EPPKKV 142

Query: 368 MVTKHTKNMGKFSSVTVSTXXXXXXXXXAREVADSYANNARIIEKQLERKGMNKRQAETP 547
           M+TK TK+MGKFSSVTVST         AREVADSYA NA++IEKQLERKGM+KR+ +  
Sbjct: 143 MMTKRTKDMGKFSSVTVSTIDEEEEEIEAREVADSYAQNAKVIEKQLERKGMSKRRLQEL 202

Query: 548 AHTLXKR 568
           A    K+
Sbjct: 203 AELEAKK 209


>AK026618-1|BAB15510.1|  222|Homo sapiens NA.  protein.
          Length = 222

 Score =  221 bits (539), Expect = 2e-57
 Identities = 110/187 (58%), Positives = 139/187 (74%), Gaps = 3/187 (1%)
 Frame = +2

Query: 17  KPLHIYYCLCGQMSLILDCTIDKLPLRPFDSARVIDGSKHAHKITSDPDE-TVYLRREKG 193
           KPLH+YYCLCGQM L+LDC ++KLP+RP D +RVID +KHAHK  +  DE T+YLRR +G
Sbjct: 25  KPLHVYYCLCGQMVLVLDCQLEKLPMRPRDRSRVIDAAKHAHKFCNTEDEETMYLRRPEG 84

Query: 194 IERQYRLKCKKCALPIYYKHD-QESNVAFIIDGALVQTPGEG-GVTDIYKQVALTQPKKI 367
           IERQYR KC KC LP++Y+   + + V FI+DGA+V+  G+G G T+IY Q     PKK+
Sbjct: 85  IERQYRKKCAKCGLPLFYQSQPKNAPVTFIVDGAVVKF-GQGFGKTNIYTQKQ-EPPKKV 142

Query: 368 MVTKHTKNMGKFSSVTVSTXXXXXXXXXAREVADSYANNARIIEKQLERKGMNKRQAETP 547
           M+TK TK+MGKFSSVTVST         AREVADSYA NA++IEKQLERKGM+KR+ +  
Sbjct: 143 MMTKRTKDMGKFSSVTVSTIDEEEEEIEAREVADSYAQNAKVIEKQLERKGMSKRRLQEL 202

Query: 548 AHTLXKR 568
           A    K+
Sbjct: 203 AELEAKK 209


>AC004000-2|AAB96348.1|   81|Homo sapiens WUGSC:H_DJ404F18.2
           protein.
          Length = 81

 Score = 83.0 bits (196), Expect = 7e-16
 Identities = 41/68 (60%), Positives = 50/68 (73%)
 Frame = +2

Query: 365 IMVTKHTKNMGKFSSVTVSTXXXXXXXXXAREVADSYANNARIIEKQLERKGMNKRQAET 544
           +M+TK TK+MGKFSSVTVST         AREVADSYA NA++IEKQLERKGM+KR+ + 
Sbjct: 1   VMMTKRTKDMGKFSSVTVSTIDEEEEEIEAREVADSYAQNAKVIEKQLERKGMSKRRLQE 60

Query: 545 PAHTLXKR 568
            A    K+
Sbjct: 61  LAELEAKK 68


>BC047590-1|AAH47590.1|  979|Homo sapiens HEAT repeat containing 4
           protein.
          Length = 979

 Score = 31.5 bits (68), Expect = 2.2
 Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 3/134 (2%)
 Frame = +2

Query: 155 DPDETVYLRREKGIERQYRLKCKKCALPIYYKHDQESNVAFIIDGALVQTPGEGGVTDIY 334
           + +ET     +  I      K  +  LP+YY+       A  ++      PG     DI+
Sbjct: 216 EAEETAEFEDQSVILPPQEKKKPELLLPVYYRLPSYFQQAETVE----IMPGNKSTEDIH 271

Query: 335 KQVALTQPK-KIMVTKHTKNMGKFSSVTVSTXXXXXXXXXAREVADSYANNARIIEKQLE 511
           ++ +L+QP+ +    + T   GKF+  T +T          + +    A   +I+ + L 
Sbjct: 272 EKTSLSQPQTQSYFRQVTPRAGKFAYSTDNTFEQEIYFDEVQIIHQIGAKRDQIVLENLN 331

Query: 512 R--KGMNKRQAETP 547
           R  K ++K   ETP
Sbjct: 332 RYNKQLSKVFPETP 345


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,343,234
Number of Sequences: 237096
Number of extensions: 1650265
Number of successful extensions: 3026
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3020
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)