Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_J15
(640 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10 |Schizo... 199 2e-52
SPBC887.13c |||3-oxoacyl-[acyl-carrier-protein]-synthase |Schizo... 31 0.19
SPBC29A3.05 |||chromatin remodeling complex subunit|Schizosaccha... 26 4.0
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 26 5.3
SPAC17H9.04c |||RNA-binding protein|Schizosaccharomyces pombe|ch... 25 7.0
SPAC19A8.03 |||phosphatidylinositol-3-phosphatase |Schizosacchar... 25 7.0
SPBC1711.13 |his2||histidinol dehydrogenase His2 |Schizosaccharo... 25 9.2
SPAC23H3.10 |ssr2||SWI/SNF and RSC complex subunit Ssr2|Schizosa... 25 9.2
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 25 9.2
>SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 199 bits (486), Expect = 2e-52
Identities = 100/208 (48%), Positives = 130/208 (62%), Gaps = 2/208 (0%)
Frame = +2
Query: 2 VVIASAVXTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLGQ 181
V I SAV TPM + A+ER I ++ EV++GNV SANLGQ
Sbjct: 6 VYIVSAVRTPMGSFGGSFASLPATKLGSIAIKGALERVNIKPSDVDEVFMGNVVSANLGQ 65
Query: 182 APARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPF 361
PARQ + AGLP+S +CTTVNKVCASGMK+ +L AQ + TG +I++AGG ESMSN P+
Sbjct: 66 NPARQCALGAGLPRSIVCTTVNKVCASGMKATILGAQTIMTGNAEIVVAGGTESMSNAPY 125
Query: 362 YLKRGE--TSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSY 535
Y + YG ++LVDG++ DGL+D Y+ MGN AE A++ I R QD +A++SY
Sbjct: 126 YAPKNRFGAKYGNVELVDGLLRDGLSDAYDGLPMGNAAELCAEEHSIDRASQDAFAISSY 185
Query: 536 KRSAAAYEAKAFVDELVPVPVPQKRGAP 619
KR+ A KAF E+VPV VP RG P
Sbjct: 186 KRAQNAQATKAFEQEIVPVEVPVGRGKP 213
>SPBC887.13c |||3-oxoacyl-[acyl-carrier-protein]-synthase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 30.7 bits (66), Expect = 0.19
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 239 TVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSN 352
T CA+G +I A ++ G D+I+AGG ES N
Sbjct: 165 TTTTACAAGCHAIGDAFNFIKLGHADVIIAGGSESCIN 202
>SPBC29A3.05 |||chromatin remodeling complex
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 139
Score = 26.2 bits (55), Expect = 4.0
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 199 CNICRFAKKYHMYNCKQSMC 258
CN+C + KY NC S C
Sbjct: 102 CNVCGYWGKYACQNCGTSYC 121
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 25.8 bits (54), Expect = 5.3
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +3
Query: 435 MCTTNFTWEIVLKTQQKNYKLLDKIKMNMLSIVTREV 545
+ + + W + KT++ YKL+ M + S+V E+
Sbjct: 409 IAASGYVWHVGSKTERSRYKLMLDCVMIITSVVPSEL 445
>SPAC17H9.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 604
Score = 25.4 bits (53), Expect = 7.0
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +1
Query: 151 WQCLFCKFGPSTCKTSCNICRFAKKYHM 234
W C C F +TSC C F H+
Sbjct: 347 WNCPMCGFSNFQRRTSCFRCSFPGPTHV 374
>SPAC19A8.03 |||phosphatidylinositol-3-phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 559
Score = 25.4 bits (53), Expect = 7.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 274 RFHARGTYFVYSCTYGTF 221
RF R Y +YSC YG+F
Sbjct: 467 RFLRRLLYHLYSCQYGSF 484
>SPBC1711.13 |his2||histidinol dehydrogenase His2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 25.0 bits (52), Expect = 9.2
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 209 AGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPF 361
AG P I T V K + + +A + GA+ IILAGG ++++ + +
Sbjct: 154 AGCPHVVISTPVRKDGTVAPEIVYIANK---IGAEAIILAGGAQAIAAMAY 201
>SPAC23H3.10 |ssr2||SWI/SNF and RSC complex subunit
Ssr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 503
Score = 25.0 bits (52), Expect = 9.2
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -2
Query: 108 SIAALTATAPNSDADKLDKLPRKEPI 31
S+ A+ T+P + +K DK+PR + +
Sbjct: 167 SLNAMEQTSPKEEDEKSDKVPRVDKV 192
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 25.0 bits (52), Expect = 9.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -2
Query: 105 IAALTATAPNSDADKLDKL 49
+AA+ ATAP ++DKLD L
Sbjct: 354 LAAIHATAPAYESDKLDYL 372
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,392,412
Number of Sequences: 5004
Number of extensions: 48734
Number of successful extensions: 162
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 285732116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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