Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_J15
(640 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 231 4e-61
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 173 7e-44
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 118 4e-27
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 107 7e-24
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 66 3e-11
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 38 0.006
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 38 0.006
U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical pr... 29 2.1
AF098499-2|AAC67396.1| 155|Caenorhabditis elegans Hypothetical ... 29 2.1
AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical... 29 2.8
Z99102-1|CAB11776.1| 523|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81545-10|CAB04448.1| 170|Caenorhabditis elegans Hypothetical p... 28 6.5
AL031627-25|CAA20971.1| 170|Caenorhabditis elegans Hypothetical... 28 6.5
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 231 bits (564), Expect = 4e-61
Identities = 110/211 (52%), Positives = 141/211 (66%)
Frame = +2
Query: 8 IASAVXTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLGQAP 187
I A TP+ + AA+ER + I+EV++G VC AN GQAP
Sbjct: 26 IVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEVFLGQVCQANAGQAP 85
Query: 188 ARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPFYL 367
ARQA + AGL S TTVNKVC+SG+K+I+LAAQ +QTG QD + GGMESMS VPFY+
Sbjct: 86 ARQAALGAGLDLSVAVTTVNKVCSSGLKAIILAAQQIQTGHQDFAIGGGMESMSQVPFYV 145
Query: 368 KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSA 547
+RGE YGG Q++DGIV DGLTD Y+K HMGNC E T+K++ ITR+DQDEYA+NSYK+SA
Sbjct: 146 QRGEIPYGGFQVIDGIVKDGLTDAYDKVHMGNCGEKTSKEMGITRKDQDEYAINSYKKSA 205
Query: 548 AAYEAKAFVDELVPVPVPQKRGAPVIFAEXE 640
A+E E+VPV V K+G ++ + E
Sbjct: 206 KAWENGNIGPEVVPVNVKSKKGVTIVDKDEE 236
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 173 bits (422), Expect = 7e-44
Identities = 93/213 (43%), Positives = 124/213 (58%)
Frame = +2
Query: 2 VVIASAVXTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLGQ 181
V I S TP+ AAIER+G+ E+I+EV G V A LGQ
Sbjct: 6 VFILSGARTPIGAYRGSFANFGAVELGTVAAKAAIERSGVAPEKIEEVIGGCVLPAGLGQ 65
Query: 182 APARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPF 361
RQ + AGLP +T TVNKVC+S MK+++ AA ++ G D IL G E+MS VPF
Sbjct: 66 NVTRQISLSAGLPVTTQAVTVNKVCSSSMKALVTAAVEIKAGYYDTILVVGTENMSQVPF 125
Query: 362 YLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKR 541
Y+ RGE +GG+Q+ DGI DGL D+ K MG CAE T K ITR++QD YA+ SYK+
Sbjct: 126 YVPRGEIPFGGIQMTDGISKDGLEDIKEKGPMGLCAEKTVKDYGITREEQDAYAIESYKK 185
Query: 542 SAAAYEAKAFVDELVPVPVPQKRGAPVIFAEXE 640
++ A+ ++ F +E+VPV V R VI + E
Sbjct: 186 ASNAWSSEKFSEEVVPVSVKTSRSEVVITEDEE 218
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 118 bits (284), Expect = 4e-27
Identities = 67/149 (44%), Positives = 87/149 (58%), Gaps = 2/149 (1%)
Frame = +2
Query: 8 IASAVXTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKE--VYIGNVCSANLGQ 181
I A TP+ + AA+ER + I+E V++G VC AN GQ
Sbjct: 104 IVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEANVFLGQVCHANAGQ 163
Query: 182 APARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPF 361
A ARQA + AGL S TTVNK +SGMK+I+LAAQ +QTG QD+ + GGMESMS VPF
Sbjct: 164 ASARQAALGAGLDLSVAVTTVNKGWSSGMKAIILAAQQIQTGHQDLAIGGGMESMSQVPF 223
Query: 362 YLKRGETSYGGMQLVDGIVFDGLTDVYNK 448
+L R E S Q V+ V DG++D ++K
Sbjct: 224 FLARVEQSSNKYQ-VEQTVQDGISDFFDK 251
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 107 bits (257), Expect = 7e-24
Identities = 58/175 (33%), Positives = 102/175 (58%), Gaps = 3/175 (1%)
Frame = +2
Query: 98 AAIERAGIPKEEIKEVYIGNV-CSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKS 274
AA++ A + + + V GNV S+ G +R + +G+P++ TVN++C SG ++
Sbjct: 38 AALKHANVGADAVDHVIFGNVVASSRDGIYLSRHIGLKSGVPQNVGALTVNRLCGSGFQA 97
Query: 275 IMLAAQGLQTGAQDIILAGGMESMSNVPFYLK--RGETSYGGMQLVDGIVFDGLTDVYNK 448
++ AAQ ++ G +I+LAGG E+MS VPF ++ R T+ G + +++D L+D Y K
Sbjct: 98 VVNAAQAIKLGESNIVLAGGTENMSMVPFAVRDIRFGTALGKKYEFEDMLWDSLSDPYAK 157
Query: 449 FHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRG 613
MG AE + ++TRQ+ DE+A+ S A EA + +E+V + + ++G
Sbjct: 158 LAMGQTAEKLGAQYKVTRQEADEFALRSQTLWKKAQEAGVYKNEIVGITIKGRKG 212
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 65.7 bits (153), Expect = 3e-11
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 18/221 (8%)
Frame = +2
Query: 2 VVIASAVXTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLGQ 181
+V+ AV TP + A +E+ +P E++ + G V
Sbjct: 26 IVLVDAVRTPFVVSGTVFKDLMAVDLQKEAIKALVEKTKLPYEQLDHIICGTVIQECKTS 85
Query: 182 APARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPF 361
AR+A + AG+P TV C S ++ L TG + I+AGG+E +S+VP
Sbjct: 86 NIAREAALLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNANAIIAGGVELLSDVPI 145
Query: 362 -YLKRGETSYGGM--------------QLVDGIV---FDGLTDVYNKFHMGNCAENTAKK 487
Y + + GM Q+V ++ + + MG+ + A
Sbjct: 146 RYNRNARKAMLGMNKAKDVPSKLKIGGQIVKNLLSPELPAVAEFSTGETMGHSGDRLAAA 205
Query: 488 LQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKR 610
++R++QDE+A+ S+ ++ A + F D +VPV + K+
Sbjct: 206 FNVSRREQDEFAIRSHTLASEAAKNGKFTD-VVPVFLDGKK 245
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +2
Query: 92 VNAAIERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMK 271
V A++ + +I++ +G + A V G+P VN CASG
Sbjct: 37 VTTALDDCKMKYSDIQQATVGYLFGGTCCGQRALYEVGLTGIP----IFNVNNACASGSS 92
Query: 272 SIMLAAQGLQTGAQDIILAGGMESMS 349
+ L Q +++G D++L G E M+
Sbjct: 93 GLFLGKQIIESGNSDVVLCAGFERMA 118
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +2
Query: 92 VNAAIERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMK 271
V A++ + +I++ +G + A V G+P VN CASG
Sbjct: 37 VTTALDDCKMKYSDIQQATVGYLFGGTCCGQRALYEVGLTGIP----IFNVNNACASGSS 92
Query: 272 SIMLAAQGLQTGAQDIILAGGMESMS 349
+ L Q +++G D++L G E M+
Sbjct: 93 GLFLGKQIIESGNSDVVLCAGFERMA 118
>U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical
protein C15H9.2 protein.
Length = 265
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +1
Query: 160 LFCKFG-PSTCK-TSCNICRFAKKYHMYNCKQ--SMCLWH----EIYNVGSTRSTNWSPR 315
L C +G PS + T NI + H ++CK C ++ YN+ ST+ W+ R
Sbjct: 182 LNCIYGYPSVFRITRGNIVELLELSHFFDCKNVTMFCEYNLCNDTCYNIRSTQKMEWAIR 241
Query: 316 YN 321
YN
Sbjct: 242 YN 243
>AF098499-2|AAC67396.1| 155|Caenorhabditis elegans Hypothetical
protein C43H8.1 protein.
Length = 155
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 404 VDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAV 526
+DG++F L + N FH C AK+++I R D+ ++ +
Sbjct: 72 LDGLLFQFLDEALNSFHAEPCF--VAKRVEILRFDKKKFEI 110
>AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical
protein F19B10.10 protein.
Length = 639
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 196 SCNICRFAKKYHMYNCKQSMCLWHEI 273
+C++ R A KY+ Y +QS LW I
Sbjct: 15 ACSLRRMANKYYPYTMRQSFPLWTSI 40
>Z99102-1|CAB11776.1| 523|Caenorhabditis elegans Hypothetical
protein B0331.2 protein.
Length = 523
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2
Query: 279 IIDFMPEAHTLFTVVHMVLFGKPANITACLAGA 181
I F E T FTV+ V FG P + T C GA
Sbjct: 443 ISGFCIEVGTAFTVLICVKFGIPISSTHCTVGA 475
>Z81545-10|CAB04448.1| 170|Caenorhabditis elegans Hypothetical
protein F49H6.13 protein.
Length = 170
Score = 27.9 bits (59), Expect = 6.5
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2
Query: 504 CLVICNFFAVFS 469
C ++CNFFAVFS
Sbjct: 15 CAIVCNFFAVFS 26
>AL031627-25|CAA20971.1| 170|Caenorhabditis elegans Hypothetical
protein F49H6.13 protein.
Length = 170
Score = 27.9 bits (59), Expect = 6.5
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2
Query: 504 CLVICNFFAVFS 469
C ++CNFFAVFS
Sbjct: 15 CAIVCNFFAVFS 26
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,466,045
Number of Sequences: 27780
Number of extensions: 288349
Number of successful extensions: 869
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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