Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_J13
         (502 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   1.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   1.2  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   3.6  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.2  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.2  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   8.2  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 40  FTVQKVSYISNIHYFPLN*TNK 105
           F+VQK+  +S++HY   N T K
Sbjct: 252 FSVQKIQELSHLHYKLANFTVK 273


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 40  FTVQKVSYISNIHYFPLN*TNK 105
           F+VQK+  +S++HY   N T K
Sbjct: 208 FSVQKIQELSHLHYKLANFTVK 229


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 159 VGINCFWPKVIAVDMLK 109
           +G NCFW   +  ++L+
Sbjct: 365 IGFNCFWVMKLLYNVLR 381


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -2

Query: 99  CLI*RKIVYV*NVGNLLYREKXIRRL-RFTKFIV 1
           C +  K +YV N    L  +K  RRL RFTK ++
Sbjct: 224 CWLISKCIYVFNPRYYL-EKKVTRRLHRFTKSVI 256


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -2

Query: 99  CLI*RKIVYV*NVGNLLYREKXIRRL-RFTKFIV 1
           C +  K +YV N    L  +K  RRL RFTK ++
Sbjct: 224 CWLISKCIYVFNPRYYL-EKKVTRRLHRFTKSVI 256


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 60  LHFKHTLFSFKLD 98
           LHF  T++S K+D
Sbjct: 440 LHFCRTMYSMKVD 452


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,191
Number of Sequences: 336
Number of extensions: 2015
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)