Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_J13
         (502 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   1.4  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   4.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   4.1  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   5.5  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   5.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   5.5  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = +1

Query: 31  NXFFTVQKVSYISNIHYFPLN*TNKRFQHVNCYDFRPETIYSN 159
           N F+T   V     + + P      RF H+N  DF    + +N
Sbjct: 449 NTFWTKSDVDLSRGLDFTPRGAVLARFTHLNHADFSYTIVINN 491


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/14 (57%), Positives = 11/14 (78%), Gaps = 1/14 (7%)
 Frame = +2

Query: 323 KED-WNNLGFQENK 361
           +ED WN++ F ENK
Sbjct: 543 REDFWNSINFNENK 556


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/14 (57%), Positives = 11/14 (78%), Gaps = 1/14 (7%)
 Frame = +2

Query: 323 KED-WNNLGFQENK 361
           +ED WN++ F ENK
Sbjct: 543 REDFWNSINFNENK 556


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 10/38 (26%), Positives = 16/38 (42%)
 Frame = +3

Query: 111 STCQLL*LSARNNLFQLHQIREVFPWITKEFARKLWFA 224
           ++C LL     N+ F    I     W+     RK W++
Sbjct: 10  NSCDLLKKRNENDPFLKRPITGDEKWVVNNIKRKRWWS 47


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 356 NKEER*SFIILLALIYNYSVGEVF 427
           NKE R   ++L  L+Y+    +VF
Sbjct: 99  NKEMRHQAVVLFRLLYSAKTFDVF 122


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 356 NKEER*SFIILLALIYNYSVGEVF 427
           NKE R   ++L  L+Y+    +VF
Sbjct: 99  NKEMRHQAVVLFRLLYSAKTFDVF 122


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,935
Number of Sequences: 438
Number of extensions: 2639
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)